RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 FYCO1Q9BQS8 1478 aa25.4■■□□□ 1.66
HDLBP-238ENST00000479894 FAM135AQ9P2D6 1515 aa25.37■■□□□ 1.65
HDLBP-238ENST00000479894 DEPDC5O75140 1603 aa25.37■■□□□ 1.65
HDLBP-238ENST00000479894 TNRQ92752 1358 aa25.36■■□□□ 1.65
HDLBP-238ENST00000479894 CFDP1Q9UEE9 299 aaPredicted RBP25.36■■□□□ 1.65
HDLBP-238ENST00000479894 MED14O60244 1454 aa25.35■■□□□ 1.65
HDLBP-238ENST00000479894 ANKLE2Q86XL3 938 aa25.34■■□□□ 1.65
HDLBP-238ENST00000479894 PZPP20742 1482 aa25.34■■□□□ 1.65
HDLBP-238ENST00000479894 RTEL1-TNFRSF6BF6WH68 1400 aa25.31■■□□□ 1.64
HDLBP-238ENST00000479894 THEMISQ8N1K5 641 aaPredicted RBP25.3■■□□□ 1.64
HDLBP-238ENST00000479894 CCNB3Q8WWL7 1395 aa25.3■■□□□ 1.64
HDLBP-238ENST00000479894 NLRP1Q9C000 1473 aa25.29■■□□□ 1.64
HDLBP-238ENST00000479894 KDM5DQ9BY66 1539 aa25.29■■□□□ 1.64
HDLBP-238ENST00000479894 RNF17Q9BXT8 1623 aaKnown RBP25.29■■□□□ 1.64
HDLBP-238ENST00000479894 IQGAP1P46940 1657 aa25.29■■□□□ 1.64
HDLBP-238ENST00000479894 DHX29Q7Z478 1369 aaKnown RBP25.29■■□□□ 1.64
HDLBP-238ENST00000479894 NPHP4O75161 1426 aaPredicted RBP25.29■■□□□ 1.64
HDLBP-238ENST00000479894 SYNMO15061 1565 aa25.28■■□□□ 1.64
HDLBP-238ENST00000479894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.28■■□□□ 1.64
HDLBP-238ENST00000479894 UGGT1Q9NYU2 1555 aa25.27■■□□□ 1.64
HDLBP-238ENST00000479894 STRCP1A6NGW2 1772 aa25.26■■□□□ 1.63
HDLBP-238ENST00000479894 FBXO31Q5XUX0 539 aaPredicted RBP25.26■■□□□ 1.63
HDLBP-238ENST00000479894 MBD5Q9P267 1494 aa25.25■■□□□ 1.63
HDLBP-238ENST00000479894 LRRC7Q96NW7 1537 aa25.23■■□□□ 1.63
HDLBP-238ENST00000479894 MIA2Q96PC5 1412 aa25.23■■□□□ 1.63
HDLBP-238ENST00000479894 TIAM1Q13009 1591 aa25.18■■□□□ 1.62
HDLBP-238ENST00000479894 KIF3BO15066 747 aa25.18■■□□□ 1.62
HDLBP-238ENST00000479894 WASHC2CQ9Y4E1 1318 aa25.17■■□□□ 1.62
HDLBP-238ENST00000479894 RGS17Q9UGC6 210 aaPredicted RBP25.17■■□□□ 1.62
HDLBP-238ENST00000479894 MTUS2Q5JR59 1369 aa25.16■■□□□ 1.62
HDLBP-238ENST00000479894 ZNF644Q9H582 1327 aaPredicted RBP25.14■■□□□ 1.62
HDLBP-238ENST00000479894 ZC3H13Q5T200 1668 aaKnown RBP25.14■■□□□ 1.62
HDLBP-238ENST00000479894 CCDC141Q6ZP82 1450 aa25.11■■□□□ 1.61
HDLBP-238ENST00000479894 XIRP1Q702N8 1843 aaKnown RBP25.09■■□□□ 1.61
HDLBP-238ENST00000479894 EHBP1L1Q8N3D4 1523 aa25.09■■□□□ 1.61
HDLBP-238ENST00000479894 RSPH4AQ5TD94 716 aa25.09■■□□□ 1.61
HDLBP-238ENST00000479894 SENP3Q9H4L4 574 aaPredicted RBP25.08■■□□□ 1.61
HDLBP-238ENST00000479894 CEP162Q5TB80 1403 aa25.05■■□□□ 1.6
HDLBP-238ENST00000479894 UBR1Q8IWV7 1749 aa25.04■■□□□ 1.6
HDLBP-238ENST00000479894 FAM135BQ49AJ0 1406 aa25.02■■□□□ 1.6
HDLBP-238ENST00000479894 CFAP65Q6ZU64 1925 aaKnown RBP25.01■■□□□ 1.59
HDLBP-238ENST00000479894 ABCC3O15438 1527 aa25.01■■□□□ 1.59
HDLBP-238ENST00000479894 ERVK-7P63135 1459 aa25■■□□□ 1.59
HDLBP-238ENST00000479894 CAMSAP2Q08AD1 1489 aa25■■□□□ 1.59
HDLBP-238ENST00000479894 SCAF11Q99590 1463 aaKnown RBP25■■□□□ 1.59
HDLBP-238ENST00000479894 ARHGEF5Q12774 1597 aa24.99■■□□□ 1.59
HDLBP-238ENST00000479894 POTEAQ6S8J7 498 aa24.98■■□□□ 1.59
HDLBP-238ENST00000479894 SLIT1O75093 1534 aa24.96■■□□□ 1.59
HDLBP-238ENST00000479894 EIF2AK4Q9P2K8 1649 aaKnown RBP24.96■■□□□ 1.59
HDLBP-238ENST00000479894 ARHGAP23Q9P227 1491 aa24.96■■□□□ 1.59
HDLBP-238ENST00000479894 NCOA2Q15596 1464 aa24.93■■□□□ 1.58
HDLBP-238ENST00000479894 TSPY4P0CV99 314 aa24.92■■□□□ 1.58
HDLBP-238ENST00000479894 TSPY10P0CW01 314 aa24.92■■□□□ 1.58
HDLBP-238ENST00000479894 CEP152O94986 1710 aa24.91■■□□□ 1.58
HDLBP-238ENST00000479894 MAST1Q9Y2H9 1570 aa24.9■■□□□ 1.58
HDLBP-238ENST00000479894 ROBO1Q9Y6N7 1651 aa24.9■■□□□ 1.58
HDLBP-238ENST00000479894 MROH1Q8NDA8 1641 aa24.9■■□□□ 1.58
HDLBP-238ENST00000479894 LTKP29376 864 aa24.89■■□□□ 1.58
HDLBP-238ENST00000479894 SETD1AO15047 1707 aaKnown RBP24.89■■□□□ 1.57
HDLBP-238ENST00000479894 TXNDC2Q86VQ3 553 aa24.88■■□□□ 1.57
HDLBP-238ENST00000479894 LRRC9Q6ZRR7 1453 aa24.86■■□□□ 1.57
HDLBP-238ENST00000479894 EID1Q9Y6B2 187 aa24.85■■□□□ 1.57
HDLBP-238ENST00000479894 KDM5AP29375 1690 aaKnown RBP24.82■■□□□ 1.56
HDLBP-238ENST00000479894 ARHGAP31Q2M1Z3 1444 aa24.82■■□□□ 1.56
HDLBP-238ENST00000479894 TMEM94Q12767 1356 aa24.81■■□□□ 1.56
HDLBP-238ENST00000479894 MAP3K1Q13233 1512 aa24.81■■□□□ 1.56
HDLBP-238ENST00000479894 PIK3C2BO00750 1634 aa24.79■■□□□ 1.56
HDLBP-238ENST00000479894 PHLPP1O60346 1717 aa24.78■■□□□ 1.56
HDLBP-238ENST00000479894 TMEM2Q9UHN6 1383 aa24.78■■□□□ 1.56
HDLBP-238ENST00000479894 KCNA6P17658 529 aa24.77■■□□□ 1.56
HDLBP-238ENST00000479894 PRDM15P57071 1507 aaPredicted RBP24.75■■□□□ 1.55
HDLBP-238ENST00000479894 DUOX2Q9NRD8 1548 aa24.75■■□□□ 1.55
HDLBP-238ENST00000479894 JCADQ9P266 1359 aa24.74■■□□□ 1.55
HDLBP-238ENST00000479894 NKTRP30414 1462 aaKnown RBP24.74■■□□□ 1.55
HDLBP-238ENST00000479894 TET3O43151 1660 aa24.74■■□□□ 1.55
HDLBP-238ENST00000479894 NWD1Q149M9 1564 aa24.73■■□□□ 1.55
HDLBP-238ENST00000479894 PROSER2Q86WR7 435 aaPredicted RBP24.71■■□□□ 1.55
HDLBP-238ENST00000479894 EFCAB6Q5THR3 1501 aa24.71■■□□□ 1.55
HDLBP-238ENST00000479894 MSH6P52701 1360 aa24.68■■□□□ 1.54
HDLBP-238ENST00000479894 UPF1Q92900 1129 aaKnown RBP eCLIP24.68■■□□□ 1.54
HDLBP-238ENST00000479894 STAG3Q9UJ98 1225 aa24.67■■□□□ 1.54
HDLBP-238ENST00000479894 COL16A1Q07092 1604 aaPredicted RBP24.67■■□□□ 1.54
HDLBP-238ENST00000479894 SLAIN2Q9P270 581 aa24.65■■□□□ 1.54
HDLBP-238ENST00000479894 ERBINQ96RT1 1412 aa24.64■■□□□ 1.54
HDLBP-238ENST00000479894 SPATA31A6Q5VVP1 1343 aa24.63■■□□□ 1.53
HDLBP-238ENST00000479894 FGD6Q6ZV73 1430 aa24.63■■□□□ 1.53
HDLBP-238ENST00000479894 ZNF772Q68DY9 489 aaPredicted RBP24.63■■□□□ 1.53
HDLBP-238ENST00000479894 CHD2O14647 1828 aaKnown RBP24.63■■□□□ 1.53
HDLBP-238ENST00000479894 SLC26A8Q96RN1 970 aa24.62■■□□□ 1.53
HDLBP-238ENST00000479894 MYOM3Q5VTT5 1437 aa24.61■■□□□ 1.53
HDLBP-238ENST00000479894 RBM33Q96EV2 1170 aaKnown RBP24.6■■□□□ 1.53
HDLBP-238ENST00000479894 SHPRHQ149N8 1683 aa24.59■■□□□ 1.53
HDLBP-238ENST00000479894 IDI1Q13907 227 aa24.59■■□□□ 1.53
HDLBP-238ENST00000479894 LRP6O75581 1613 aa24.59■■□□□ 1.53
HDLBP-238ENST00000479894 LMTK2Q8IWU2 1503 aa24.59■■□□□ 1.53
HDLBP-238ENST00000479894 KIF15Q9NS87 1388 aa24.58■■□□□ 1.53
HDLBP-238ENST00000479894 KANK1Q14678 1352 aa24.57■■□□□ 1.52
HDLBP-238ENST00000479894 ADGRB3O60242 1522 aa24.57■■□□□ 1.52
HDLBP-238ENST00000479894 CROCC2H7BZ55 1655 aa24.57■■□□□ 1.52
HDLBP-238ENST00000479894 NCOA3Q9Y6Q9 1424 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms