RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 NECTIN2Q92692 538 aa13.13□□□□□ -0.31
GAPVD1-217ENST00000479511 ATN1P54259 1190 aaPredicted RBP13.11□□□□□ -0.31
GAPVD1-217ENST00000479511 OCEL1Q9H607 264 aa13.11□□□□□ -0.31
GAPVD1-217ENST00000479511 CDHR5Q9HBB8 845 aa13.11□□□□□ -0.31
GAPVD1-217ENST00000479511 PHOX2BQ99453 314 aa13.1□□□□□ -0.31
GAPVD1-217ENST00000479511 NPDC1Q9NQX5 325 aaPredicted RBP13.1□□□□□ -0.31
GAPVD1-217ENST00000479511 TBC1D12O60347 775 aa13.09□□□□□ -0.31
GAPVD1-217ENST00000479511 MDM2Q00987 491 aaPredicted RBP13.09□□□□□ -0.31
GAPVD1-217ENST00000479511 ZNF777Q9ULD5 760 aaPredicted RBP13.09□□□□□ -0.31
GAPVD1-217ENST00000479511 POM121Q96HA1 1249 aa13.08□□□□□ -0.32
GAPVD1-217ENST00000479511 SKIV2LQ15477 1246 aaKnown RBP13.07□□□□□ -0.32
GAPVD1-217ENST00000479511 PROSER2Q86WR7 435 aaPredicted RBP13.07□□□□□ -0.32
GAPVD1-217ENST00000479511 PROCA1Q8NCQ7 364 aaPredicted RBP13.07□□□□□ -0.32
GAPVD1-217ENST00000479511 SLC39A7Q92504 469 aa13.07□□□□□ -0.32
GAPVD1-217ENST00000479511 G3V3G9 751 aa13.06□□□□□ -0.32
GAPVD1-217ENST00000479511 CLCN1P35523 988 aa13.06□□□□□ -0.32
GAPVD1-217ENST00000479511 FNBP4Q8N3X1 1017 aaPredicted RBP13.06□□□□□ -0.32
GAPVD1-217ENST00000479511 METRNQ9UJH8 293 aa13.06□□□□□ -0.32
GAPVD1-217ENST00000479511 ZBTB7CA1YPR0 619 aa13.05□□□□□ -0.32
GAPVD1-217ENST00000479511 SSTR3P32745 418 aaPredicted RBP13.05□□□□□ -0.32
GAPVD1-217ENST00000479511 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
GAPVD1-217ENST00000479511 C7P10643 843 aa13.04□□□□□ -0.32
GAPVD1-217ENST00000479511 EN1Q05925 392 aaPredicted RBP13.01□□□□□ -0.33
GAPVD1-217ENST00000479511 IER5LQ5T953 404 aa13.01□□□□□ -0.33
GAPVD1-217ENST00000479511 BEGAINQ9BUH8 593 aa13.01□□□□□ -0.33
GAPVD1-217ENST00000479511 ANO8Q9HCE9 1232 aaPredicted RBP13.01□□□□□ -0.33
GAPVD1-217ENST00000479511 POTEB2H3BUK9 544 aa13□□□□□ -0.33
GAPVD1-217ENST00000479511 POLR3EQ9NVU0 708 aa13□□□□□ -0.33
GAPVD1-217ENST00000479511 PTCD2Q8WV60 388 aaKnown RBP12.98□□□□□ -0.33
GAPVD1-217ENST00000479511 NLRP7Q8WX94 980 aa12.98□□□□□ -0.33
GAPVD1-217ENST00000479511 FAM161AQ3B820 660 aa12.97□□□□□ -0.33
GAPVD1-217ENST00000479511 FAM217BQ9NTX9 383 aaPredicted RBP12.97□□□□□ -0.33
GAPVD1-217ENST00000479511 MAP3K7O43318 606 aa12.96□□□□□ -0.33
GAPVD1-217ENST00000479511 PLCG2P16885 1265 aa12.96□□□□□ -0.33
GAPVD1-217ENST00000479511 RBM33Q96EV2 1170 aaKnown RBP12.96□□□□□ -0.33
GAPVD1-217ENST00000479511 L3MBTL3Q96JM7 780 aaPredicted RBP12.96□□□□□ -0.33
GAPVD1-217ENST00000479511 CCDC9Q9Y3X0 531 aaKnown RBP12.96□□□□□ -0.33
GAPVD1-217ENST00000479511 TSR1Q2NL82 804 aaKnown RBP12.95□□□□□ -0.34
GAPVD1-217ENST00000479511 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.95□□□□□ -0.34
GAPVD1-217ENST00000479511 ATP1B4Q9UN42 357 aaPredicted RBP12.95□□□□□ -0.34
GAPVD1-217ENST00000479511 RAD21O60216 631 aa12.94□□□□□ -0.34
GAPVD1-217ENST00000479511 PHF14O94880 888 aa12.94□□□□□ -0.34
GAPVD1-217ENST00000479511 EPAS1Q99814 870 aa12.94□□□□□ -0.34
GAPVD1-217ENST00000479511 SERPINA10Q9UK55 444 aa12.94□□□□□ -0.34
GAPVD1-217ENST00000479511 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
GAPVD1-217ENST00000479511 MYSM1Q5VVJ2 828 aa12.93□□□□□ -0.34
GAPVD1-217ENST00000479511 CCDC97Q96F63 343 aaPredicted RBP12.93□□□□□ -0.34
GAPVD1-217ENST00000479511 OTUD5Q96G74 571 aa12.93□□□□□ -0.34
GAPVD1-217ENST00000479511 FBXO31Q5XUX0 539 aaPredicted RBP12.92□□□□□ -0.34
GAPVD1-217ENST00000479511 TRAIPQ9BWF2 469 aa12.92□□□□□ -0.34
GAPVD1-217ENST00000479511 SNRKQ9NRH2 765 aa12.92□□□□□ -0.34
GAPVD1-217ENST00000479511 SPDYE5A6NIY4 337 aa12.91□□□□□ -0.34
GAPVD1-217ENST00000479511 METTL3Q86U44 580 aaKnown RBP12.91□□□□□ -0.34
GAPVD1-217ENST00000479511 PCDHGA10Q9Y5H3 936 aa12.91□□□□□ -0.34
GAPVD1-217ENST00000479511 PLSCR2Q9NRY7 297 aa12.9□□□□□ -0.34
GAPVD1-217ENST00000479511 CLK2P49760 499 aaKnown RBP12.88□□□□□ -0.35
GAPVD1-217ENST00000479511 SEC24BO95487 1268 aa12.87□□□□□ -0.35
GAPVD1-217ENST00000479511 SLAIN1Q8ND83 568 aa12.87□□□□□ -0.35
GAPVD1-217ENST00000479511 COLQQ9Y215 455 aaPredicted RBP12.87□□□□□ -0.35
GAPVD1-217ENST00000479511 SLC34A2O95436 690 aa12.86□□□□□ -0.35
GAPVD1-217ENST00000479511 RFC5P40937 340 aa12.86□□□□□ -0.35
GAPVD1-217ENST00000479511 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
GAPVD1-217ENST00000479511 PXYLP1Q8TE99 480 aa12.85□□□□□ -0.35
GAPVD1-217ENST00000479511 TBC1D2Q9BYX2 928 aa12.85□□□□□ -0.35
GAPVD1-217ENST00000479511 ADGRG1Q9Y653 693 aa12.85□□□□□ -0.35
GAPVD1-217ENST00000479511 POTEFA5A3E0 1075 aa12.84□□□□□ -0.35
GAPVD1-217ENST00000479511 OATP04181 439 aa12.84□□□□□ -0.35
GAPVD1-217ENST00000479511 TYW1BQ6NUM6 668 aa12.84□□□□□ -0.35
GAPVD1-217ENST00000479511 PADI6Q6TGC4 694 aa12.84□□□□□ -0.35
GAPVD1-217ENST00000479511 BANK1Q8NDB2 785 aa12.84□□□□□ -0.35
GAPVD1-217ENST00000479511 POTEJP0CG39 1038 aa12.83□□□□□ -0.36
GAPVD1-217ENST00000479511 KCTD17Q8N5Z5 321 aa12.83□□□□□ -0.36
GAPVD1-217ENST00000479511 ZNF330Q9Y3S2 320 aaPredicted RBP12.83□□□□□ -0.36
GAPVD1-217ENST00000479511 LIMD1Q9UGP4 676 aa12.82□□□□□ -0.36
GAPVD1-217ENST00000479511 RETREG2Q8NC44 543 aa12.81□□□□□ -0.36
GAPVD1-217ENST00000479511 SCUBE2Q9NQ36 999 aa12.8□□□□□ -0.36
GAPVD1-217ENST00000479511 AEBP1Q8IUX7 1158 aa12.79□□□□□ -0.36
GAPVD1-217ENST00000479511 TTC13Q8NBP0 860 aa12.78□□□□□ -0.36
GAPVD1-217ENST00000479511 PPP2R2DQ66LE6 453 aa12.77□□□□□ -0.37
GAPVD1-217ENST00000479511 MTMR14Q8NCE2 650 aa12.77□□□□□ -0.37
GAPVD1-217ENST00000479511 TMEM259Q4ZIN3 620 aa12.76□□□□□ -0.37
GAPVD1-217ENST00000479511 FBXW7Q969H0 707 aa12.76□□□□□ -0.37
GAPVD1-217ENST00000479511 GDPD2Q9HCC8 539 aa12.76□□□□□ -0.37
GAPVD1-217ENST00000479511 IRF5Q13568 498 aa12.75□□□□□ -0.37
GAPVD1-217ENST00000479511 JPH4Q96JJ6 628 aa12.75□□□□□ -0.37
GAPVD1-217ENST00000479511 PCDHGA4Q9Y5G9 962 aa12.75□□□□□ -0.37
GAPVD1-217ENST00000479511 KDM4FA0A1W2PPD8 638 aa12.74□□□□□ -0.37
GAPVD1-217ENST00000479511 C6orf132Q5T0Z8 1188 aa12.73□□□□□ -0.37
GAPVD1-217ENST00000479511 RIC3Q7Z5B4 369 aa12.73□□□□□ -0.37
GAPVD1-217ENST00000479511 SPIRE2Q8WWL2 714 aa12.73□□□□□ -0.37
GAPVD1-217ENST00000479511 FOSBP53539 338 aa12.72□□□□□ -0.37
GAPVD1-217ENST00000479511 CERKQ8TCT0 537 aa12.72□□□□□ -0.37
GAPVD1-217ENST00000479511 DIXDC1Q155Q3 683 aa12.71□□□□□ -0.37
GAPVD1-217ENST00000479511 POM121CA8CG34 1229 aa12.7□□□□□ -0.38
GAPVD1-217ENST00000479511 C3orf67Q6ZVT6 689 aa12.69□□□□□ -0.38
GAPVD1-217ENST00000479511 RBM27Q9P2N5 1060 aaKnown RBP12.69□□□□□ -0.38
GAPVD1-217ENST00000479511 SPTLC1O15269 473 aa12.67□□□□□ -0.38
GAPVD1-217ENST00000479511 ABL2P42684 1182 aa12.67□□□□□ -0.38
GAPVD1-217ENST00000479511 TUSC1Q2TAM9 212 aa12.66□□□□□ -0.38
GAPVD1-217ENST00000479511 CALR3Q96L12 384 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms