RNA–Protein interactions for RNA: ENST00000479488.1

GSE1-209, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 649 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-209ENST00000479488 PTPRKQ15262 1439 aa23.44■■□□□ 1.34
GSE1-209ENST00000479488 CNTLNQ9NXG0 1405 aa23.44■■□□□ 1.34
GSE1-209ENST00000479488 RNF17Q9BXT8 1623 aaKnown RBP23.41■■□□□ 1.34
GSE1-209ENST00000479488 ROCK1Q13464 1354 aa23.4■■□□□ 1.34
GSE1-209ENST00000479488 KDM5DQ9BY66 1539 aa23.39■■□□□ 1.34
GSE1-209ENST00000479488 MROH2AA6NES4 1674 aa23.39■■□□□ 1.34
GSE1-209ENST00000479488 ANKRD50Q9ULJ7 1429 aa23.38■■□□□ 1.33
GSE1-209ENST00000479488 C3P01024 1663 aa23.38■■□□□ 1.33
GSE1-209ENST00000479488 WASHC2CQ9Y4E1 1318 aa23.36■■□□□ 1.33
GSE1-209ENST00000479488 CEBPAP49715 358 aaPredicted RBP23.36■■□□□ 1.33
GSE1-209ENST00000479488 PPP6R1Q9UPN7 881 aa23.36■■□□□ 1.33
GSE1-209ENST00000479488 FAM135AQ9P2D6 1515 aa23.36■■□□□ 1.33
GSE1-209ENST00000479488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.35■■□□□ 1.335e-9■□□□□ 10
GSE1-209ENST00000479488 ZC3H13Q5T200 1668 aaKnown RBP23.35■■□□□ 1.33
GSE1-209ENST00000479488 KANK1Q14678 1352 aa23.34■■□□□ 1.33
GSE1-209ENST00000479488 CEP152O94986 1710 aa23.33■■□□□ 1.32
GSE1-209ENST00000479488 MROH1Q8NDA8 1641 aa23.33■■□□□ 1.32
GSE1-209ENST00000479488 PRDM15P57071 1507 aaPredicted RBP23.33■■□□□ 1.32
GSE1-209ENST00000479488 DEPDC5O75140 1603 aa23.32■■□□□ 1.32
GSE1-209ENST00000479488 ZMYM3Q14202 1370 aa23.31■■□□□ 1.32
GSE1-209ENST00000479488 ABCC3O15438 1527 aa23.3■■□□□ 1.32
GSE1-209ENST00000479488 GCC2Q8IWJ2 1684 aa23.29■■□□□ 1.32
GSE1-209ENST00000479488 CAMSAP1Q5T5Y3 1602 aa23.26■■□□□ 1.31
GSE1-209ENST00000479488 PREX1Q8TCU6 1659 aa23.25■■□□□ 1.31
GSE1-209ENST00000479488 UNC13BO14795 1591 aa23.24■■□□□ 1.31
GSE1-209ENST00000479488 PZPP20742 1482 aa23.23■■□□□ 1.31
GSE1-209ENST00000479488 HFM1A2PYH4 1435 aa23.22■■□□□ 1.31
GSE1-209ENST00000479488 NAIPQ13075 1403 aa23.22■■□□□ 1.31
GSE1-209ENST00000479488 NPATQ14207 1427 aa23.22■■□□□ 1.31
GSE1-209ENST00000479488 UHRF1BP1Q6BDS2 1440 aa23.22■■□□□ 1.31
GSE1-209ENST00000479488 SETD1BQ9UPS6 1966 aaKnown RBP23.21■■□□□ 1.31
GSE1-209ENST00000479488 CFAP65Q6ZU64 1925 aaKnown RBP23.19■■□□□ 1.3
GSE1-209ENST00000479488 VWDEQ8N2E2 1590 aa23.18■■□□□ 1.3
GSE1-209ENST00000479488 MYO3AQ8NEV4 1616 aa23.17■■□□□ 1.3
GSE1-209ENST00000479488 LMTK3Q96Q04 1460 aa23.17■■□□□ 1.3
GSE1-209ENST00000479488 LMTK2Q8IWU2 1503 aa23.16■■□□□ 1.3
GSE1-209ENST00000479488 NUP155O75694 1391 aa23.15■■□□□ 1.3
GSE1-209ENST00000479488 FBXO31Q5XUX0 539 aaPredicted RBP23.15■■□□□ 1.3
GSE1-209ENST00000479488 IQGAP3Q86VI3 1631 aa23.15■■□□□ 1.3
GSE1-209ENST00000479488 TNRQ92752 1358 aa23.14■■□□□ 1.3
GSE1-209ENST00000479488 EFCAB6Q5THR3 1501 aa23.14■■□□□ 1.3
GSE1-209ENST00000479488 TET3O43151 1660 aa23.14■■□□□ 1.29
GSE1-209ENST00000479488 ERVK-7P63135 1459 aa23.12■■□□□ 1.29
GSE1-209ENST00000479488 TRIM52Q96A61 297 aa23.12■■□□□ 1.29
GSE1-209ENST00000479488 ARHGAP31Q2M1Z3 1444 aa23.11■■□□□ 1.29
GSE1-209ENST00000479488 HSPA2P54652 639 aa23.1■■□□□ 1.29
GSE1-209ENST00000479488 SPATA31D1Q6ZQQ2 1576 aa23.1■■□□□ 1.29
GSE1-209ENST00000479488 CEP170BQ9Y4F5 1589 aaPredicted RBP23.09■■□□□ 1.29
GSE1-209ENST00000479488 ZNF142P52746 1687 aaPredicted RBP23.09■■□□□ 1.29
GSE1-209ENST00000479488 SETD5Q9C0A6 1442 aa23.05■■□□□ 1.28
GSE1-209ENST00000479488 RPRD2Q5VT52 1461 aaKnown RBP23.05■■□□□ 1.28
GSE1-209ENST00000479488 NLRP1Q9C000 1473 aa23.05■■□□□ 1.28
GSE1-209ENST00000479488 E9PCH4 1651 aa23.04■■□□□ 1.28
GSE1-209ENST00000479488 A2ML1A8K2U0 1454 aa23.04■■□□□ 1.28
GSE1-209ENST00000479488 RAB3GAP2Q9H2M9 1393 aa22.99■■□□□ 1.27
GSE1-209ENST00000479488 SYNMO15061 1565 aa22.98■■□□□ 1.27
GSE1-209ENST00000479488 UGGT1Q9NYU2 1555 aa22.98■■□□□ 1.27
GSE1-209ENST00000479488 SLC4A1APQ9BWU0 796 aaKnown RBP22.98■■□□□ 1.27
GSE1-209ENST00000479488 STAG3Q9UJ98 1225 aa22.97■■□□□ 1.27
GSE1-209ENST00000479488 NOS1P29475 1434 aa22.96■■□□□ 1.27
GSE1-209ENST00000479488 ACIN1Q9UKV3 1341 aaKnown RBP22.95■■□□□ 1.26
GSE1-209ENST00000479488 SPHKAPQ2M3C7 1700 aa22.94■■□□□ 1.26
GSE1-209ENST00000479488 PIK3C2BO00750 1634 aa22.94■■□□□ 1.26
GSE1-209ENST00000479488 PKD2Q13563 968 aa22.92■■□□□ 1.26
GSE1-209ENST00000479488 UBR1Q8IWV7 1749 aa22.91■■□□□ 1.26
GSE1-209ENST00000479488 THEMISQ8N1K5 641 aaPredicted RBP22.91■■□□□ 1.26
GSE1-209ENST00000479488 TRIM26Q12899 539 aaPredicted RBP22.9■■□□□ 1.26
GSE1-209ENST00000479488 PLA2R1Q13018 1463 aa22.9■■□□□ 1.26
GSE1-209ENST00000479488 CHGAP10645 457 aaKnown RBP22.89■■□□□ 1.25
GSE1-209ENST00000479488 SLC52A1Q9NWF4 448 aa22.89■■□□□ 1.25
GSE1-209ENST00000479488 ADGRB3O60242 1522 aa22.88■■□□□ 1.25
GSE1-209ENST00000479488 STRCQ7RTU9 1775 aa22.88■■□□□ 1.25
GSE1-209ENST00000479488 POLR1AO95602 1720 aaPredicted RBP22.88■■□□□ 1.25
GSE1-209ENST00000479488 IDI1Q13907 227 aa22.87■■□□□ 1.25
GSE1-209ENST00000479488 MPHOSPH9Q99550 1183 aa22.86■■□□□ 1.25
GSE1-209ENST00000479488 NCKAP5LQ9HCH0 1330 aa22.84■■□□□ 1.25
GSE1-209ENST00000479488 KDM5AP29375 1690 aaKnown RBP22.84■■□□□ 1.25
GSE1-209ENST00000479488 TRPM2O94759 1503 aa22.84■■□□□ 1.25
GSE1-209ENST00000479488 FOXD1Q16676 465 aa22.83■■□□□ 1.25
GSE1-209ENST00000479488 DMRT2Q9Y5R5 561 aa22.83■■□□□ 1.25
GSE1-209ENST00000479488 MYO5BQ9ULV0 1848 aa22.82■■□□□ 1.24
GSE1-209ENST00000479488 ANKLE2Q86XL3 938 aa22.82■■□□□ 1.24
GSE1-209ENST00000479488 PTPRTO14522 1441 aa22.82■■□□□ 1.24
GSE1-209ENST00000479488 CLTCL1P53675 1640 aa22.81■■□□□ 1.24
GSE1-209ENST00000479488 EID1Q9Y6B2 187 aa22.79■■□□□ 1.24
GSE1-209ENST00000479488 TMEM131LA2VDJ0 1609 aa22.79■■□□□ 1.24
GSE1-209ENST00000479488 KIF1BO60333 1816 aa22.78■■□□□ 1.24
GSE1-209ENST00000479488 HRCP23327 699 aa22.77■■□□□ 1.24
GSE1-209ENST00000479488 SCAF11Q99590 1463 aaKnown RBP22.77■■□□□ 1.24
GSE1-209ENST00000479488 SLIT1O75093 1534 aa22.77■■□□□ 1.24
GSE1-209ENST00000479488 TMEM2Q9UHN6 1383 aa22.76■■□□□ 1.23
GSE1-209ENST00000479488 NEURL4Q96JN8 1562 aa22.76■■□□□ 1.23
GSE1-209ENST00000479488 CCDC144AA2RUR9 1427 aa22.75■■□□□ 1.23
GSE1-209ENST00000479488 TXNDC2Q86VQ3 553 aa22.75■■□□□ 1.23
GSE1-209ENST00000479488 ARHGAP23Q9P227 1491 aa22.74■■□□□ 1.23
GSE1-209ENST00000479488 PPP1R15AO75807 674 aaPredicted RBP22.74■■□□□ 1.23
GSE1-209ENST00000479488 ZNF326Q5BKZ1 582 aaKnown RBP22.74■■□□□ 1.23
GSE1-209ENST00000479488 NPHP4O75161 1426 aaPredicted RBP22.74■■□□□ 1.23
GSE1-209ENST00000479488 IQGAP1P46940 1657 aa22.73■■□□□ 1.23
GSE1-209ENST00000479488 BCANQ96GW7 911 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms