RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 PTPRMP28827 1452 aa37.87■■■■□ 3.65
PERM1-203ENST00000479361 CNTLNQ9NXG0 1405 aa37.87■■■■□ 3.65
PERM1-203ENST00000479361 ANKRD50Q9ULJ7 1429 aa37.83■■■■□ 3.65
PERM1-203ENST00000479361 RNF17Q9BXT8 1623 aaKnown RBP37.82■■■■□ 3.64
PERM1-203ENST00000479361 FAM135AQ9P2D6 1515 aa37.79■■■■□ 3.64
PERM1-203ENST00000479361 WASHC2CQ9Y4E1 1318 aa37.74■■■■□ 3.63
PERM1-203ENST00000479361 KDM5DQ9BY66 1539 aa37.73■■■■□ 3.63
PERM1-203ENST00000479361 MROH2AA6NES4 1674 aa37.71■■■■□ 3.63
PERM1-203ENST00000479361 CLTCQ00610 1675 aaKnown RBP37.71■■■■□ 3.63
PERM1-203ENST00000479361 PRDM15P57071 1507 aaPredicted RBP37.7■■■■□ 3.63
PERM1-203ENST00000479361 DEPDC5O75140 1603 aa37.69■■■■□ 3.62
PERM1-203ENST00000479361 MROH1Q8NDA8 1641 aa37.69■■■■□ 3.62
PERM1-203ENST00000479361 ZMYM3Q14202 1370 aa37.68■■■■□ 3.62
PERM1-203ENST00000479361 PLPPR3Q6T4P5 718 aa37.68■■■■□ 3.62
PERM1-203ENST00000479361 KANK1Q14678 1352 aa37.68■■■■□ 3.62
PERM1-203ENST00000479361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.67■■■■□ 3.62
PERM1-203ENST00000479361 HFM1A2PYH4 1435 aa37.66■■■■□ 3.62
PERM1-203ENST00000479361 NAIPQ13075 1403 aa37.65■■■■□ 3.62
PERM1-203ENST00000479361 ZC3H13Q5T200 1668 aaKnown RBP37.64■■■■□ 3.62
PERM1-203ENST00000479361 CEBPAP49715 358 aaPredicted RBP37.64■■■■□ 3.62
PERM1-203ENST00000479361 C3P01024 1663 aa37.63■■■■□ 3.61
PERM1-203ENST00000479361 ABCC3O15438 1527 aa37.62■■■■□ 3.61
PERM1-203ENST00000479361 GCC2Q8IWJ2 1684 aa37.61■■■■□ 3.61
PERM1-203ENST00000479361 UNC13BO14795 1591 aa37.55■■■■□ 3.6
PERM1-203ENST00000479361 VWDEQ8N2E2 1590 aa37.55■■■■□ 3.6
PERM1-203ENST00000479361 NPATQ14207 1427 aa37.53■■■■□ 3.6
PERM1-203ENST00000479361 CEP152O94986 1710 aa37.52■■■■□ 3.6
PERM1-203ENST00000479361 PZPP20742 1482 aa37.51■■■■□ 3.59
PERM1-203ENST00000479361 LMTK2Q8IWU2 1503 aa37.51■■■■□ 3.59
PERM1-203ENST00000479361 CAMSAP1Q5T5Y3 1602 aa37.48■■■■□ 3.59
PERM1-203ENST00000479361 NUP155O75694 1391 aa37.46■■■■□ 3.59
PERM1-203ENST00000479361 ARHGAP31Q2M1Z3 1444 aa37.44■■■■□ 3.58
PERM1-203ENST00000479361 SETD1BQ9UPS6 1966 aaKnown RBP37.42■■■■□ 3.58
PERM1-203ENST00000479361 IQGAP3Q86VI3 1631 aa37.4■■■■□ 3.58
PERM1-203ENST00000479361 FBXO31Q5XUX0 539 aaPredicted RBP37.4■■■■□ 3.58
PERM1-203ENST00000479361 SETD5Q9C0A6 1442 aa37.4■■■■□ 3.58
PERM1-203ENST00000479361 EFCAB6Q5THR3 1501 aa37.38■■■■□ 3.57
PERM1-203ENST00000479361 PREX1Q8TCU6 1659 aa37.37■■■■□ 3.57
PERM1-203ENST00000479361 UHRF1BP1Q6BDS2 1440 aa37.37■■■■□ 3.57
PERM1-203ENST00000479361 ACIN1Q9UKV3 1341 aaKnown RBP37.36■■■■□ 3.57
PERM1-203ENST00000479361 TET3O43151 1660 aa37.36■■■■□ 3.57
PERM1-203ENST00000479361 TNRQ92752 1358 aa37.35■■■■□ 3.57
PERM1-203ENST00000479361 TRIM52Q96A61 297 aa37.34■■■■□ 3.57
PERM1-203ENST00000479361 ERVK-7P63135 1459 aa37.33■■■■□ 3.57
PERM1-203ENST00000479361 LMTK3Q96Q04 1460 aa37.33■■■■□ 3.57
PERM1-203ENST00000479361 RPRD2Q5VT52 1461 aaKnown RBP37.32■■■■□ 3.56
PERM1-203ENST00000479361 SPATA31D1Q6ZQQ2 1576 aa37.31■■■■□ 3.56
PERM1-203ENST00000479361 TRIM26Q12899 539 aaPredicted RBP37.28■■■■□ 3.56
PERM1-203ENST00000479361 RAB3GAP2Q9H2M9 1393 aa37.26■■■■□ 3.55
PERM1-203ENST00000479361 MYO3AQ8NEV4 1616 aa37.25■■■■□ 3.55
PERM1-203ENST00000479361 NLRP1Q9C000 1473 aa37.22■■■■□ 3.55
PERM1-203ENST00000479361 CFAP65Q6ZU64 1925 aaKnown RBP37.21■■■■□ 3.55
PERM1-203ENST00000479361 E9PCH4 1651 aa37.19■■■■□ 3.54
PERM1-203ENST00000479361 NOS1P29475 1434 aa37.19■■■■□ 3.54
PERM1-203ENST00000479361 CEP170BQ9Y4F5 1589 aaPredicted RBP37.18■■■■□ 3.54
PERM1-203ENST00000479361 HRCP23327 699 aa37.18■■■■□ 3.54
PERM1-203ENST00000479361 SLC4A1APQ9BWU0 796 aaKnown RBP37.18■■■■□ 3.54
PERM1-203ENST00000479361 A2ML1A8K2U0 1454 aa37.18■■■■□ 3.54
PERM1-203ENST00000479361 ZNF142P52746 1687 aaPredicted RBP37.17■■■■□ 3.54
PERM1-203ENST00000479361 HSPA2P54652 639 aa37.14■■■■□ 3.54
PERM1-203ENST00000479361 PKD2Q13563 968 aa37.1■■■■□ 3.53
PERM1-203ENST00000479361 SLC52A1Q9NWF4 448 aa37.1■■■■□ 3.53
PERM1-203ENST00000479361 SYNMO15061 1565 aa37.09■■■■□ 3.53
PERM1-203ENST00000479361 MPHOSPH9Q99550 1183 aa37.08■■■■□ 3.53
PERM1-203ENST00000479361 UGGT1Q9NYU2 1555 aa37.06■■■■□ 3.52
PERM1-203ENST00000479361 IDI1Q13907 227 aa37.04■■■■□ 3.52
PERM1-203ENST00000479361 THEMISQ8N1K5 641 aaPredicted RBP37.04■■■■□ 3.52
PERM1-203ENST00000479361 PTPRTO14522 1441 aa37.02■■■■□ 3.52
PERM1-203ENST00000479361 STAG3Q9UJ98 1225 aa37■■■■□ 3.51
PERM1-203ENST00000479361 SPHKAPQ2M3C7 1700 aa36.99■■■■□ 3.51
PERM1-203ENST00000479361 PIK3C2BO00750 1634 aa36.97■■■■□ 3.51
PERM1-203ENST00000479361 PLA2R1Q13018 1463 aa36.96■■■■□ 3.51
PERM1-203ENST00000479361 UBR1Q8IWV7 1749 aa36.94■■■■□ 3.5
PERM1-203ENST00000479361 TRPM2O94759 1503 aa36.94■■■■□ 3.5
PERM1-203ENST00000479361 KDM5AP29375 1690 aaKnown RBP36.93■■■■□ 3.5
PERM1-203ENST00000479361 FOXD1Q16676 465 aa36.91■■■■□ 3.5
PERM1-203ENST00000479361 ADGRB3O60242 1522 aa36.9■■■■□ 3.5
PERM1-203ENST00000479361 ANKLE2Q86XL3 938 aa36.85■■■■□ 3.49
PERM1-203ENST00000479361 DMRT2Q9Y5R5 561 aa36.85■■■■□ 3.49
PERM1-203ENST00000479361 STRCQ7RTU9 1775 aa36.84■■■■□ 3.49
PERM1-203ENST00000479361 CHGAP10645 457 aaKnown RBP36.84■■■■□ 3.49
PERM1-203ENST00000479361 NCKAP5LQ9HCH0 1330 aa36.82■■■■□ 3.48
PERM1-203ENST00000479361 TMEM131LA2VDJ0 1609 aa36.81■■■■□ 3.48
PERM1-203ENST00000479361 TMEM2Q9UHN6 1383 aa36.81■■■■□ 3.48
PERM1-203ENST00000479361 SLIT1O75093 1534 aa36.81■■■■□ 3.48
PERM1-203ENST00000479361 CLTCL1P53675 1640 aa36.81■■■■□ 3.48
PERM1-203ENST00000479361 ARHGAP23Q9P227 1491 aa36.8■■■■□ 3.48
PERM1-203ENST00000479361 CCDC144AA2RUR9 1427 aa36.78■■■■□ 3.48
PERM1-203ENST00000479361 EID1Q9Y6B2 187 aa36.78■■■■□ 3.48
PERM1-203ENST00000479361 POLR1AO95602 1720 aaPredicted RBP36.74■■■■□ 3.47
PERM1-203ENST00000479361 TXNDC2Q86VQ3 553 aa36.74■■■■□ 3.47
PERM1-203ENST00000479361 PCGF6Q9BYE7 350 aa36.74■■■■□ 3.47
PERM1-203ENST00000479361 SCAF11Q99590 1463 aaKnown RBP36.73■■■■□ 3.47
PERM1-203ENST00000479361 HDGFP51858 240 aaKnown RBP36.72■■■■□ 3.47
PERM1-203ENST00000479361 MYO5BQ9ULV0 1848 aa36.7■■■■□ 3.47
PERM1-203ENST00000479361 KIF1BO60333 1816 aa36.69■■■■□ 3.46
PERM1-203ENST00000479361 MED14O60244 1454 aa36.69■■■■□ 3.46
PERM1-203ENST00000479361 ANKRD30BQ9BXX2 1392 aa36.68■■■■□ 3.46
PERM1-203ENST00000479361 LTKP29376 864 aa36.68■■■■□ 3.46
PERM1-203ENST00000479361 NEURL4Q96JN8 1562 aa36.68■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms