RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 FAM135AQ9P2D6 1515 aa21.09■□□□□ 0.97
PCIF1-202ENST00000479348 FER1L4A9Z1Z3 1794 aa21.08■□□□□ 0.97
PCIF1-202ENST00000479348 RNF17Q9BXT8 1623 aaKnown RBP21.08■□□□□ 0.97
PCIF1-202ENST00000479348 PTPRMP28827 1452 aa21.06■□□□□ 0.96
PCIF1-202ENST00000479348 RIMS1Q86UR5 1692 aaKnown RBP21.04■□□□□ 0.96
PCIF1-202ENST00000479348 HFM1A2PYH4 1435 aa21.04■□□□□ 0.96
PCIF1-202ENST00000479348 NAIPQ13075 1403 aa21.03■□□□□ 0.96
PCIF1-202ENST00000479348 WASHC2CQ9Y4E1 1318 aa21.03■□□□□ 0.96
PCIF1-202ENST00000479348 KANK1Q14678 1352 aa21.02■□□□□ 0.96
PCIF1-202ENST00000479348 KDM5DQ9BY66 1539 aa21.02■□□□□ 0.96
PCIF1-202ENST00000479348 DEPDC5O75140 1603 aa21.02■□□□□ 0.96
PCIF1-202ENST00000479348 PRDM15P57071 1507 aaPredicted RBP21.01■□□□□ 0.95
PCIF1-202ENST00000479348 MROH1Q8NDA8 1641 aa21.01■□□□□ 0.95
PCIF1-202ENST00000479348 MROH2AA6NES4 1674 aa21.01■□□□□ 0.95
PCIF1-202ENST00000479348 ZMYM3Q14202 1370 aa21■□□□□ 0.95
PCIF1-202ENST00000479348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.99■□□□□ 0.954e-8■■■■□ 20.6
PCIF1-202ENST00000479348 GCC2Q8IWJ2 1684 aa20.99■□□□□ 0.95
PCIF1-202ENST00000479348 CLTCQ00610 1675 aaKnown RBP20.98■□□□□ 0.95
PCIF1-202ENST00000479348 ZC3H13Q5T200 1668 aaKnown RBP20.98■□□□□ 0.95
PCIF1-202ENST00000479348 ABCC3O15438 1527 aa20.97■□□□□ 0.95
PCIF1-202ENST00000479348 VWDEQ8N2E2 1590 aa20.95■□□□□ 0.95
PCIF1-202ENST00000479348 ACIN1Q9UKV3 1341 aaKnown RBP20.95■□□□□ 0.94
PCIF1-202ENST00000479348 UNC13BO14795 1591 aa20.95■□□□□ 0.94
PCIF1-202ENST00000479348 CEBPAP49715 358 aaPredicted RBP20.94■□□□□ 0.94
PCIF1-202ENST00000479348 C3P01024 1663 aa20.93■□□□□ 0.94
PCIF1-202ENST00000479348 LMTK2Q8IWU2 1503 aa20.93■□□□□ 0.94
PCIF1-202ENST00000479348 NPATQ14207 1427 aa20.92■□□□□ 0.94
PCIF1-202ENST00000479348 SETD5Q9C0A6 1442 aa20.91■□□□□ 0.94
PCIF1-202ENST00000479348 NUP155O75694 1391 aa20.91■□□□□ 0.94
PCIF1-202ENST00000479348 ARHGAP31Q2M1Z3 1444 aa20.9■□□□□ 0.94
PCIF1-202ENST00000479348 PZPP20742 1482 aa20.9■□□□□ 0.94
PCIF1-202ENST00000479348 TRIM26Q12899 539 aaPredicted RBP20.9■□□□□ 0.94
PCIF1-202ENST00000479348 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
PCIF1-202ENST00000479348 CEP152O94986 1710 aa20.89■□□□□ 0.93
PCIF1-202ENST00000479348 CAMSAP1Q5T5Y3 1602 aa20.88■□□□□ 0.93
PCIF1-202ENST00000479348 SETD1BQ9UPS6 1966 aaKnown RBP20.87■□□□□ 0.93
PCIF1-202ENST00000479348 IQGAP3Q86VI3 1631 aa20.87■□□□□ 0.93
PCIF1-202ENST00000479348 HRCP23327 699 aa20.85■□□□□ 0.93
PCIF1-202ENST00000479348 TRIM52Q96A61 297 aa20.84■□□□□ 0.93
PCIF1-202ENST00000479348 TET3O43151 1660 aa20.84■□□□□ 0.93
PCIF1-202ENST00000479348 EFCAB6Q5THR3 1501 aa20.84■□□□□ 0.93
PCIF1-202ENST00000479348 FBXO31Q5XUX0 539 aaPredicted RBP20.83■□□□□ 0.93
PCIF1-202ENST00000479348 RPRD2Q5VT52 1461 aaKnown RBP20.83■□□□□ 0.92
PCIF1-202ENST00000479348 RAB3GAP2Q9H2M9 1393 aa20.82■□□□□ 0.92
PCIF1-202ENST00000479348 TNRQ92752 1358 aa20.81■□□□□ 0.92
PCIF1-202ENST00000479348 SPATA31D1Q6ZQQ2 1576 aa20.8■□□□□ 0.92
PCIF1-202ENST00000479348 ERVK-7P63135 1459 aa20.79■□□□□ 0.92
PCIF1-202ENST00000479348 UHRF1BP1Q6BDS2 1440 aa20.79■□□□□ 0.92
PCIF1-202ENST00000479348 PREX1Q8TCU6 1659 aa20.79■□□□□ 0.92
PCIF1-202ENST00000479348 SLC4A1APQ9BWU0 796 aaKnown RBP20.77■□□□□ 0.91
PCIF1-202ENST00000479348 NLRP1Q9C000 1473 aa20.75■□□□□ 0.91
PCIF1-202ENST00000479348 NOS1P29475 1434 aa20.75■□□□□ 0.91
PCIF1-202ENST00000479348 LMTK3Q96Q04 1460 aa20.74■□□□□ 0.91
PCIF1-202ENST00000479348 E9PCH4 1651 aa20.73■□□□□ 0.91
PCIF1-202ENST00000479348 CFAP65Q6ZU64 1925 aaKnown RBP20.72■□□□□ 0.91
PCIF1-202ENST00000479348 PKD2Q13563 968 aa20.72■□□□□ 0.91
PCIF1-202ENST00000479348 MPHOSPH9Q99550 1183 aa20.72■□□□□ 0.91
PCIF1-202ENST00000479348 SLC52A1Q9NWF4 448 aa20.72■□□□□ 0.91
PCIF1-202ENST00000479348 MYO3AQ8NEV4 1616 aa20.72■□□□□ 0.91
PCIF1-202ENST00000479348 A2ML1A8K2U0 1454 aa20.71■□□□□ 0.91
PCIF1-202ENST00000479348 ZNF142P52746 1687 aaPredicted RBP20.69■□□□□ 0.9
PCIF1-202ENST00000479348 CEP170BQ9Y4F5 1589 aaPredicted RBP20.69■□□□□ 0.9
PCIF1-202ENST00000479348 PTPRTO14522 1441 aa20.68■□□□□ 0.9
PCIF1-202ENST00000479348 SYNMO15061 1565 aa20.67■□□□□ 0.9
PCIF1-202ENST00000479348 THEMISQ8N1K5 641 aaPredicted RBP20.66■□□□□ 0.9
PCIF1-202ENST00000479348 IDI1Q13907 227 aa20.65■□□□□ 0.9
PCIF1-202ENST00000479348 UGGT1Q9NYU2 1555 aa20.64■□□□□ 0.89
PCIF1-202ENST00000479348 HSPA2P54652 639 aa20.63■□□□□ 0.89
PCIF1-202ENST00000479348 SPHKAPQ2M3C7 1700 aa20.62■□□□□ 0.89
PCIF1-202ENST00000479348 STAG3Q9UJ98 1225 aa20.61■□□□□ 0.89
PCIF1-202ENST00000479348 KDM5AP29375 1690 aaKnown RBP20.6■□□□□ 0.89
PCIF1-202ENST00000479348 PIK3C2BO00750 1634 aa20.6■□□□□ 0.89
PCIF1-202ENST00000479348 TRPM2O94759 1503 aa20.6■□□□□ 0.89
PCIF1-202ENST00000479348 PLA2R1Q13018 1463 aa20.6■□□□□ 0.89
PCIF1-202ENST00000479348 FOXD1Q16676 465 aa20.57■□□□□ 0.88
PCIF1-202ENST00000479348 UBR1Q8IWV7 1749 aa20.57■□□□□ 0.88
PCIF1-202ENST00000479348 PCGF6Q9BYE7 350 aa20.56■□□□□ 0.88
PCIF1-202ENST00000479348 ADGRB3O60242 1522 aa20.56■□□□□ 0.88
PCIF1-202ENST00000479348 ANKLE2Q86XL3 938 aa20.53■□□□□ 0.88
PCIF1-202ENST00000479348 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
PCIF1-202ENST00000479348 CCDC144AA2RUR9 1427 aa20.53■□□□□ 0.88
PCIF1-202ENST00000479348 SLIT1O75093 1534 aa20.52■□□□□ 0.88
PCIF1-202ENST00000479348 TMEM2Q9UHN6 1383 aa20.52■□□□□ 0.88
PCIF1-202ENST00000479348 TMEM131LA2VDJ0 1609 aa20.52■□□□□ 0.88
PCIF1-202ENST00000479348 ARHGAP23Q9P227 1491 aa20.52■□□□□ 0.88
PCIF1-202ENST00000479348 CHGAP10645 457 aaKnown RBP20.52■□□□□ 0.87
PCIF1-202ENST00000479348 CLTCL1P53675 1640 aa20.51■□□□□ 0.87
PCIF1-202ENST00000479348 HDGFP51858 240 aaKnown RBP20.51■□□□□ 0.87
PCIF1-202ENST00000479348 ILDR1Q86SU0 546 aaPredicted RBP20.51■□□□□ 0.87
PCIF1-202ENST00000479348 EID1Q9Y6B2 187 aa20.51■□□□□ 0.87
PCIF1-202ENST00000479348 ANKRD30BQ9BXX2 1392 aa20.5■□□□□ 0.87
PCIF1-202ENST00000479348 STRCQ7RTU9 1775 aa20.48■□□□□ 0.87
PCIF1-202ENST00000479348 NCKAP5LQ9HCH0 1330 aa20.47■□□□□ 0.87
PCIF1-202ENST00000479348 TXNDC2Q86VQ3 553 aa20.47■□□□□ 0.87
PCIF1-202ENST00000479348 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.47■□□□□ 0.87
PCIF1-202ENST00000479348 KIF1BO60333 1816 aa20.46■□□□□ 0.87
PCIF1-202ENST00000479348 SCAF11Q99590 1463 aaKnown RBP20.45■□□□□ 0.86
PCIF1-202ENST00000479348 MED14O60244 1454 aa20.45■□□□□ 0.86
PCIF1-202ENST00000479348 DHX57Q6P158 1386 aaKnown RBP20.44■□□□□ 0.86
PCIF1-202ENST00000479348 ZFYVE9O95405 1425 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms