RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 FAM135AQ9P2D6 1515 aa27.68■■■□□ 2.02
HLA-A-206ENST00000479320 DMRT2Q9Y5R5 561 aa27.67■■■□□ 2.02
HLA-A-206ENST00000479320 SHANK2Q9UPX8 1470 aa27.66■■■□□ 2.02
HLA-A-206ENST00000479320 DAPK1P53355 1430 aa27.65■■■□□ 2.02
HLA-A-206ENST00000479320 DNMT1P26358 1616 aaKnown RBP27.65■■■□□ 2.02
HLA-A-206ENST00000479320 MYO3AQ8NEV4 1616 aa27.64■■■□□ 2.02
HLA-A-206ENST00000479320 RNF17Q9BXT8 1623 aaKnown RBP27.64■■■□□ 2.02
HLA-A-206ENST00000479320 EIF2AK4Q9P2K8 1649 aaKnown RBP27.64■■■□□ 2.02
HLA-A-206ENST00000479320 DUOX2Q9NRD8 1548 aa27.64■■■□□ 2.01
HLA-A-206ENST00000479320 FBXO31Q5XUX0 539 aaPredicted RBP27.63■■■□□ 2.01
HLA-A-206ENST00000479320 RRP7BPQ9NSQ0 103 aa27.62■■■□□ 2.01
HLA-A-206ENST00000479320 ZNF142P52746 1687 aaPredicted RBP27.61■■■□□ 2.01
HLA-A-206ENST00000479320 CAMSAP1Q5T5Y3 1602 aa27.6■■■□□ 2.01
HLA-A-206ENST00000479320 NCOA1Q15788 1441 aa27.6■■■□□ 2.01
HLA-A-206ENST00000479320 PZPP20742 1482 aa27.6■■■□□ 2.01
HLA-A-206ENST00000479320 KIF15Q9NS87 1388 aa27.6■■■□□ 2.01
HLA-A-206ENST00000479320 CEP170BQ9Y4F5 1589 aaPredicted RBP27.59■■■□□ 2.01
HLA-A-206ENST00000479320 FBXO41Q8TF61 875 aa27.58■■■□□ 2.01
HLA-A-206ENST00000479320 CHIC2Q9UKJ5 165 aa27.57■■■□□ 2
HLA-A-206ENST00000479320 PTPRTO14522 1441 aa27.57■■■□□ 2
HLA-A-206ENST00000479320 MROH1Q8NDA8 1641 aa27.57■■■□□ 2
HLA-A-206ENST00000479320 FAM50AQ14320 339 aaKnown RBP27.55■■■□□ 2
HLA-A-206ENST00000479320 ABCC3O15438 1527 aa27.55■■■□□ 2
HLA-A-206ENST00000479320 TNRQ92752 1358 aa27.54■■■□□ 2
HLA-A-206ENST00000479320 ZC3H13Q5T200 1668 aaKnown RBP27.54■■■□□ 2
HLA-A-206ENST00000479320 ERBINQ96RT1 1412 aa27.53■■■□□ 2
HLA-A-206ENST00000479320 A2ML1A8K2U0 1454 aa27.53■■■□□ 2
HLA-A-206ENST00000479320 CERKQ8TCT0 537 aa27.52■■■□□ 2
HLA-A-206ENST00000479320 ANKRD30AQ9BXX3 1397 aa27.52■■■□□ 2
HLA-A-206ENST00000479320 NCKAP5LQ9HCH0 1330 aa27.51■■□□□ 1.99
HLA-A-206ENST00000479320 PLA2R1Q13018 1463 aa27.5■■□□□ 1.99
HLA-A-206ENST00000479320 CEP152O94986 1710 aa27.5■■□□□ 1.99
HLA-A-206ENST00000479320 PKD2Q13563 968 aa27.46■■□□□ 1.99
HLA-A-206ENST00000479320 PRDM15P57071 1507 aaPredicted RBP27.46■■□□□ 1.99
HLA-A-206ENST00000479320 CFAP65Q6ZU64 1925 aaKnown RBP27.45■■□□□ 1.98
HLA-A-206ENST00000479320 ADGRL2O95490 1459 aa27.45■■□□□ 1.98
HLA-A-206ENST00000479320 PPARGC1BQ86YN6 1023 aaKnown RBP27.44■■□□□ 1.98
HLA-A-206ENST00000479320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.44■■□□□ 1.98
HLA-A-206ENST00000479320 DEPDC5O75140 1603 aa27.44■■□□□ 1.98
HLA-A-206ENST00000479320 NLRP1Q9C000 1473 aa27.43■■□□□ 1.98
HLA-A-206ENST00000479320 SPATA31D1Q6ZQQ2 1576 aa27.43■■□□□ 1.98
HLA-A-206ENST00000479320 ERVK-7P63135 1459 aa27.41■■□□□ 1.98
HLA-A-206ENST00000479320 ARHGAP31Q2M1Z3 1444 aa27.38■■□□□ 1.97
HLA-A-206ENST00000479320 THEMISQ8N1K5 641 aaPredicted RBP27.38■■□□□ 1.97
HLA-A-206ENST00000479320 KANK1Q14678 1352 aa27.38■■□□□ 1.97
HLA-A-206ENST00000479320 UGGT1Q9NYU2 1555 aa27.37■■□□□ 1.97
HLA-A-206ENST00000479320 LTBP4Q8N2S1 1624 aa27.37■■□□□ 1.97
HLA-A-206ENST00000479320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.36■■□□□ 1.97
HLA-A-206ENST00000479320 VWDEQ8N2E2 1590 aa27.33■■□□□ 1.97
HLA-A-206ENST00000479320 POLR1AO95602 1720 aaPredicted RBP27.33■■□□□ 1.97
HLA-A-206ENST00000479320 ANKRD50Q9ULJ7 1429 aa27.33■■□□□ 1.97
HLA-A-206ENST00000479320 LMTK2Q8IWU2 1503 aa27.31■■□□□ 1.96
HLA-A-206ENST00000479320 ANKLE2Q86XL3 938 aa27.31■■□□□ 1.96
HLA-A-206ENST00000479320 ZNF335Q9H4Z2 1342 aaPredicted RBP27.31■■□□□ 1.96
HLA-A-206ENST00000479320 NEURL4Q96JN8 1562 aa27.3■■□□□ 1.96
HLA-A-206ENST00000479320 ITGAEP38570 1179 aa27.26■■□□□ 1.95
HLA-A-206ENST00000479320 ROCK1Q13464 1354 aa27.26■■□□□ 1.95
HLA-A-206ENST00000479320 UBR1Q8IWV7 1749 aa27.25■■□□□ 1.95
HLA-A-206ENST00000479320 EFCAB6Q5THR3 1501 aa27.22■■□□□ 1.95
HLA-A-206ENST00000479320 MED14O60244 1454 aa27.22■■□□□ 1.95
HLA-A-206ENST00000479320 IQSEC2Q5JU85 1478 aa27.21■■□□□ 1.95
HLA-A-206ENST00000479320 NPHP4O75161 1426 aaPredicted RBP27.2■■□□□ 1.94
HLA-A-206ENST00000479320 PIK3C2BO00750 1634 aa27.18■■□□□ 1.94
HLA-A-206ENST00000479320 IDI1Q13907 227 aa27.16■■□□□ 1.94
HLA-A-206ENST00000479320 NOS1P29475 1434 aa27.16■■□□□ 1.94
HLA-A-206ENST00000479320 UNC13BO14795 1591 aa27.16■■□□□ 1.94
HLA-A-206ENST00000479320 SYNMO15061 1565 aa27.16■■□□□ 1.94
HLA-A-206ENST00000479320 RRBP1Q9P2E9 1410 aaKnown RBP27.15■■□□□ 1.94
HLA-A-206ENST00000479320 IQGAP1P46940 1657 aa27.15■■□□□ 1.94
HLA-A-206ENST00000479320 TET3O43151 1660 aa27.14■■□□□ 1.93
HLA-A-206ENST00000479320 ARHGAP23Q9P227 1491 aa27.13■■□□□ 1.93
HLA-A-206ENST00000479320 SLIT1O75093 1534 aa27.13■■□□□ 1.93
HLA-A-206ENST00000479320 STAG3Q9UJ98 1225 aa27.13■■□□□ 1.93
HLA-A-206ENST00000479320 RPRD2Q5VT52 1461 aaKnown RBP27.12■■□□□ 1.93
HLA-A-206ENST00000479320 LTKP29376 864 aa27.12■■□□□ 1.93
HLA-A-206ENST00000479320 TXNDC2Q86VQ3 553 aa27.12■■□□□ 1.93
HLA-A-206ENST00000479320 SCAF11Q99590 1463 aaKnown RBP27.11■■□□□ 1.93
HLA-A-206ENST00000479320 KDM5AP29375 1690 aaKnown RBP27.1■■□□□ 1.93
HLA-A-206ENST00000479320 GCC2Q8IWJ2 1684 aa27.1■■□□□ 1.93
HLA-A-206ENST00000479320 SLC52A1Q9NWF4 448 aa27.09■■□□□ 1.93
HLA-A-206ENST00000479320 CPS1P31327 1500 aa27.07■■□□□ 1.92
HLA-A-206ENST00000479320 TMEM2Q9UHN6 1383 aa27.07■■□□□ 1.92
HLA-A-206ENST00000479320 EID1Q9Y6B2 187 aa27.07■■□□□ 1.92
HLA-A-206ENST00000479320 IQGAP3Q86VI3 1631 aa27.07■■□□□ 1.92
HLA-A-206ENST00000479320 NUP155O75694 1391 aa27.05■■□□□ 1.92
HLA-A-206ENST00000479320 E9PCH4 1651 aa27.04■■□□□ 1.92
HLA-A-206ENST00000479320 UBAP1LF5GYI3 381 aa27.02■■□□□ 1.92
HLA-A-206ENST00000479320 ADGRB3O60242 1522 aa27.02■■□□□ 1.92
HLA-A-206ENST00000479320 STRCP1A6NGW2 1772 aa27.01■■□□□ 1.91
HLA-A-206ENST00000479320 MYO5BQ9ULV0 1848 aa26.96■■□□□ 1.91
HLA-A-206ENST00000479320 NAIPQ13075 1403 aa26.96■■□□□ 1.91
HLA-A-206ENST00000479320 TMEM131LA2VDJ0 1609 aa26.93■■□□□ 1.9
HLA-A-206ENST00000479320 LRRC7Q96NW7 1537 aa26.91■■□□□ 1.9
HLA-A-206ENST00000479320 TOM1O60784 492 aa26.9■■□□□ 1.9
HLA-A-206ENST00000479320 CHGAP10645 457 aaKnown RBP26.9■■□□□ 1.9
HLA-A-206ENST00000479320 ZFYVE9O95405 1425 aa26.89■■□□□ 1.89
HLA-A-206ENST00000479320 SLC26A8Q96RN1 970 aa26.88■■□□□ 1.89
HLA-A-206ENST00000479320 HFM1A2PYH4 1435 aa26.87■■□□□ 1.89
HLA-A-206ENST00000479320 RIMS2Q9UQ26 1411 aa26.86■■□□□ 1.89
HLA-A-206ENST00000479320 HDGFP51858 240 aaKnown RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms