RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 WASHC2CQ9Y4E1 1318 aa15.28■□□□□ 0.04
SCAMP3-206ENST00000478737 FAM135AQ9P2D6 1515 aa15.27■□□□□ 0.03
SCAMP3-206ENST00000478737 ADGRL2O95490 1459 aa15.27■□□□□ 0.03
SCAMP3-206ENST00000478737 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
SCAMP3-206ENST00000478737 ERBINQ96RT1 1412 aa15.26■□□□□ 0.03
SCAMP3-206ENST00000478737 SETD1BQ9UPS6 1966 aaKnown RBP15.25■□□□□ 0.03
SCAMP3-206ENST00000478737 RRBP1Q9P2E9 1410 aaKnown RBP15.24■□□□□ 0.03
SCAMP3-206ENST00000478737 ROCK1Q13464 1354 aa15.24■□□□□ 0.03
SCAMP3-206ENST00000478737 MROH2AA6NES4 1674 aa15.23■□□□□ 0.03
SCAMP3-206ENST00000478737 HSPA2P54652 639 aa15.23■□□□□ 0.03
SCAMP3-206ENST00000478737 UHRF1BP1Q6BDS2 1440 aa15.22■□□□□ 0.03
SCAMP3-206ENST00000478737 C3P01024 1663 aa15.22■□□□□ 0.03
SCAMP3-206ENST00000478737 EIF2AK4Q9P2K8 1649 aaKnown RBP15.21■□□□□ 0.03
SCAMP3-206ENST00000478737 FBXO31Q5XUX0 539 aaPredicted RBP15.21■□□□□ 0.03
SCAMP3-206ENST00000478737 KDM5DQ9BY66 1539 aa15.21■□□□□ 0.03
SCAMP3-206ENST00000478737 RNF17Q9BXT8 1623 aaKnown RBP15.21■□□□□ 0.02
SCAMP3-206ENST00000478737 ANKRD50Q9ULJ7 1429 aa15.19■□□□□ 0.02
SCAMP3-206ENST00000478737 PZPP20742 1482 aa15.19■□□□□ 0.02
SCAMP3-206ENST00000478737 CLTCQ00610 1675 aaKnown RBP15.19■□□□□ 0.02
SCAMP3-206ENST00000478737 ABCC3O15438 1527 aa15.18■□□□□ 0.02
SCAMP3-206ENST00000478737 MROH1Q8NDA8 1641 aa15.18■□□□□ 0.02
SCAMP3-206ENST00000478737 ARHGAP31Q2M1Z3 1444 aa15.17■□□□□ 0.02
SCAMP3-206ENST00000478737 ITGAEP38570 1179 aa15.15■□□□□ 0.02
SCAMP3-206ENST00000478737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.02
SCAMP3-206ENST00000478737 PRDM15P57071 1507 aaPredicted RBP15.15■□□□□ 0.02
SCAMP3-206ENST00000478737 PREX1Q8TCU6 1659 aa15.15■□□□□ 0.02
SCAMP3-206ENST00000478737 KANK1Q14678 1352 aa15.14■□□□□ 0.01
SCAMP3-206ENST00000478737 TNRQ92752 1358 aa15.14■□□□□ 0.01
SCAMP3-206ENST00000478737 VWDEQ8N2E2 1590 aa15.13■□□□□ 0.01
SCAMP3-206ENST00000478737 DMRT2Q9Y5R5 561 aa15.13■□□□□ 0.01
SCAMP3-206ENST00000478737 LMTK2Q8IWU2 1503 aa15.12■□□□□ 0.01
SCAMP3-206ENST00000478737 DEPDC5O75140 1603 aa15.12■□□□□ 0.01
SCAMP3-206ENST00000478737 GCC2Q8IWJ2 1684 aa15.12■□□□□ 0.01
SCAMP3-206ENST00000478737 ZC3H13Q5T200 1668 aaKnown RBP15.1■□□□□ 0.01
SCAMP3-206ENST00000478737 A2ML1A8K2U0 1454 aa15.1■□□□□ 0.01
SCAMP3-206ENST00000478737 NLRP1Q9C000 1473 aa15.09■□□□□ 0.01
SCAMP3-206ENST00000478737 ERVK-7P63135 1459 aa15.08■□□□□ 0.01
SCAMP3-206ENST00000478737 SPATA31D1Q6ZQQ2 1576 aa15.08■□□□□ 0
SCAMP3-206ENST00000478737 PKD2Q13563 968 aa15.08■□□□□ 0
SCAMP3-206ENST00000478737 THEMISQ8N1K5 641 aaPredicted RBP15.08■□□□□ 0
SCAMP3-206ENST00000478737 PLA2R1Q13018 1463 aa15.08■□□□□ 0
SCAMP3-206ENST00000478737 CEP170BQ9Y4F5 1589 aaPredicted RBP15.07■□□□□ 0
SCAMP3-206ENST00000478737 PTPRTO14522 1441 aa15.06■□□□□ 0
SCAMP3-206ENST00000478737 NAIPQ13075 1403 aa15.06■□□□□ 0
SCAMP3-206ENST00000478737 CAMSAP1Q5T5Y3 1602 aa15.04■□□□□ -0
SCAMP3-206ENST00000478737 MYO3AQ8NEV4 1616 aa15.04■□□□□ -0
SCAMP3-206ENST00000478737 HFM1A2PYH4 1435 aa15.04■□□□□ -0
SCAMP3-206ENST00000478737 NOS1P29475 1434 aa15.04■□□□□ -0
SCAMP3-206ENST00000478737 NUP155O75694 1391 aa15.04■□□□□ -0
SCAMP3-206ENST00000478737 ZNF142P52746 1687 aaPredicted RBP15.03■□□□□ -0
SCAMP3-206ENST00000478737 RPRD2Q5VT52 1461 aaKnown RBP15.03■□□□□ -0
SCAMP3-206ENST00000478737 NCKAP5LQ9HCH0 1330 aa15.03■□□□□ -0
SCAMP3-206ENST00000478737 IDI1Q13907 227 aa15.03■□□□□ -0
SCAMP3-206ENST00000478737 SLC52A1Q9NWF4 448 aa15.03■□□□□ -0
SCAMP3-206ENST00000478737 STRCQ7RTU9 1775 aa15.03■□□□□ -0
SCAMP3-206ENST00000478737 CEP152O94986 1710 aa15.03■□□□□ -0
SCAMP3-206ENST00000478737 ANKLE2Q86XL3 938 aa15.01□□□□□ -0.01
SCAMP3-206ENST00000478737 UNC13BO14795 1591 aa15.01□□□□□ -0.01
SCAMP3-206ENST00000478737 EFCAB6Q5THR3 1501 aa15.01□□□□□ -0.01
SCAMP3-206ENST00000478737 UGGT1Q9NYU2 1555 aa14.99□□□□□ -0.01
SCAMP3-206ENST00000478737 TET3O43151 1660 aa14.96□□□□□ -0.01
SCAMP3-206ENST00000478737 IQGAP3Q86VI3 1631 aa14.95□□□□□ -0.02
SCAMP3-206ENST00000478737 MED14O60244 1454 aa14.95□□□□□ -0.02
SCAMP3-206ENST00000478737 ARHGAP23Q9P227 1491 aa14.95□□□□□ -0.02
SCAMP3-206ENST00000478737 ACIN1Q9UKV3 1341 aaKnown RBP14.94□□□□□ -0.02
SCAMP3-206ENST00000478737 LTKP29376 864 aa14.94□□□□□ -0.02
SCAMP3-206ENST00000478737 CERKQ8TCT0 537 aa14.94□□□□□ -0.02
SCAMP3-206ENST00000478737 TMEM2Q9UHN6 1383 aa14.94□□□□□ -0.02
SCAMP3-206ENST00000478737 STAG3Q9UJ98 1225 aa14.93□□□□□ -0.02
SCAMP3-206ENST00000478737 SYNMO15061 1565 aa14.93□□□□□ -0.02
SCAMP3-206ENST00000478737 SLIT1O75093 1534 aa14.92□□□□□ -0.02
SCAMP3-206ENST00000478737 CFAP65Q6ZU64 1925 aaKnown RBP14.92□□□□□ -0.02
SCAMP3-206ENST00000478737 TXNDC2Q86VQ3 553 aa14.92□□□□□ -0.02
SCAMP3-206ENST00000478737 TRIM52Q96A61 297 aa14.91□□□□□ -0.02
SCAMP3-206ENST00000478737 EID1Q9Y6B2 187 aa14.91□□□□□ -0.02
SCAMP3-206ENST00000478737 NPHP4O75161 1426 aaPredicted RBP14.91□□□□□ -0.02
SCAMP3-206ENST00000478737 NEURL4Q96JN8 1562 aa14.9□□□□□ -0.02
SCAMP3-206ENST00000478737 UBR1Q8IWV7 1749 aa14.89□□□□□ -0.03
SCAMP3-206ENST00000478737 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
SCAMP3-206ENST00000478737 ZNF335Q9H4Z2 1342 aaPredicted RBP14.89□□□□□ -0.03
SCAMP3-206ENST00000478737 SCAF11Q99590 1463 aaKnown RBP14.89□□□□□ -0.03
SCAMP3-206ENST00000478737 LTBP4Q8N2S1 1624 aa14.88□□□□□ -0.03
SCAMP3-206ENST00000478737 E9PCH4 1651 aa14.88□□□□□ -0.03
SCAMP3-206ENST00000478737 KDM5AP29375 1690 aaKnown RBP14.88□□□□□ -0.03
SCAMP3-206ENST00000478737 HRCP23327 699 aa14.88□□□□□ -0.03
SCAMP3-206ENST00000478737 ILDR1Q86SU0 546 aaPredicted RBP14.88□□□□□ -0.03
SCAMP3-206ENST00000478737 FBXO41Q8TF61 875 aa14.88□□□□□ -0.03
SCAMP3-206ENST00000478737 SETD5Q9C0A6 1442 aa14.88□□□□□ -0.03
SCAMP3-206ENST00000478737 PIK3C2BO00750 1634 aa14.88□□□□□ -0.03
SCAMP3-206ENST00000478737 HDGFP51858 240 aaKnown RBP14.87□□□□□ -0.03
SCAMP3-206ENST00000478737 MPHOSPH9Q99550 1183 aa14.86□□□□□ -0.03
SCAMP3-206ENST00000478737 ADGRB3O60242 1522 aa14.85□□□□□ -0.03
SCAMP3-206ENST00000478737 ZFYVE9O95405 1425 aa14.84□□□□□ -0.03
SCAMP3-206ENST00000478737 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.84□□□□□ -0.03
SCAMP3-206ENST00000478737 TMEM131LA2VDJ0 1609 aa14.82□□□□□ -0.04
SCAMP3-206ENST00000478737 SPHKAPQ2M3C7 1700 aa14.82□□□□□ -0.04
SCAMP3-206ENST00000478737 IQSEC2Q5JU85 1478 aa14.82□□□□□ -0.04
SCAMP3-206ENST00000478737 CHGAP10645 457 aaKnown RBP14.81□□□□□ -0.04
SCAMP3-206ENST00000478737 RAB3GAP2Q9H2M9 1393 aa14.81□□□□□ -0.04
SCAMP3-206ENST00000478737 RIMS2Q9UQ26 1411 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms