RNA–Protein interactions for RNA: ENST00000478620.2

COL19A1-203, Transcript of collagen type XIX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL19A1, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-203ENST00000478620 PTPRKQ15262 1439 aa31.8■■■□□ 2.68
COL19A1-203ENST00000478620 ADGRL2O95490 1459 aa31.78■■■□□ 2.68
COL19A1-203ENST00000478620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.77■■■□□ 2.68
COL19A1-203ENST00000478620 ZMYM3Q14202 1370 aa31.77■■■□□ 2.68
COL19A1-203ENST00000478620 ERBINQ96RT1 1412 aa31.75■■■□□ 2.67
COL19A1-203ENST00000478620 EIF2AK4Q9P2K8 1649 aaKnown RBP31.71■■■□□ 2.67
COL19A1-203ENST00000478620 ROCK1Q13464 1354 aa31.71■■■□□ 2.67
COL19A1-203ENST00000478620 CLTCQ00610 1675 aaKnown RBP31.71■■■□□ 2.67
COL19A1-203ENST00000478620 ANKRD50Q9ULJ7 1429 aa31.68■■■□□ 2.66
COL19A1-203ENST00000478620 KANK1Q14678 1352 aa31.67■■■□□ 2.66
COL19A1-203ENST00000478620 C3P01024 1663 aa31.65■■■□□ 2.66
COL19A1-203ENST00000478620 KDM5DQ9BY66 1539 aa31.65■■■□□ 2.66
COL19A1-203ENST00000478620 RNF17Q9BXT8 1623 aaKnown RBP31.64■■■□□ 2.65
COL19A1-203ENST00000478620 MROH2AA6NES4 1674 aa31.64■■■□□ 2.65
COL19A1-203ENST00000478620 FAM135AQ9P2D6 1515 aa31.59■■■□□ 2.65
COL19A1-203ENST00000478620 FBXO31Q5XUX0 539 aaPredicted RBP31.57■■■□□ 2.64
COL19A1-203ENST00000478620 SETD1BQ9UPS6 1966 aaKnown RBP31.56■■■□□ 2.64
COL19A1-203ENST00000478620 ABCC3O15438 1527 aa31.55■■■□□ 2.64
COL19A1-203ENST00000478620 NPATQ14207 1427 aa31.55■■■□□ 2.64
COL19A1-203ENST00000478620 MROH1Q8NDA8 1641 aa31.54■■■□□ 2.64
COL19A1-203ENST00000478620 UHRF1BP1Q6BDS2 1440 aa31.54■■■□□ 2.64
COL19A1-203ENST00000478620 HSPA2P54652 639 aa31.52■■■□□ 2.64
COL19A1-203ENST00000478620 PRDM15P57071 1507 aaPredicted RBP31.5■■■□□ 2.63
COL19A1-203ENST00000478620 LMTK3Q96Q04 1460 aa31.5■■■□□ 2.63
COL19A1-203ENST00000478620 ZC3H13Q5T200 1668 aaKnown RBP31.49■■■□□ 2.63
COL19A1-203ENST00000478620 PZPP20742 1482 aa31.49■■■□□ 2.63
COL19A1-203ENST00000478620 DEPDC5O75140 1603 aa31.48■■■□□ 2.63
COL19A1-203ENST00000478620 CEP152O94986 1710 aa31.47■■■□□ 2.63
COL19A1-203ENST00000478620 PREX1Q8TCU6 1659 aa31.47■■■□□ 2.63
COL19A1-203ENST00000478620 TNRQ92752 1358 aa31.45■■■□□ 2.63
COL19A1-203ENST00000478620 NAIPQ13075 1403 aa31.44■■■□□ 2.62
COL19A1-203ENST00000478620 NUP155O75694 1391 aa31.43■■■□□ 2.62
COL19A1-203ENST00000478620 CAMSAP1Q5T5Y3 1602 aa31.41■■■□□ 2.62
COL19A1-203ENST00000478620 TRIM52Q96A61 297 aa31.4■■■□□ 2.62
COL19A1-203ENST00000478620 HFM1A2PYH4 1435 aa31.4■■■□□ 2.62
COL19A1-203ENST00000478620 ARHGAP31Q2M1Z3 1444 aa31.38■■■□□ 2.61
COL19A1-203ENST00000478620 VWDEQ8N2E2 1590 aa31.38■■■□□ 2.61
COL19A1-203ENST00000478620 CFAP65Q6ZU64 1925 aaKnown RBP31.37■■■□□ 2.61
COL19A1-203ENST00000478620 LMTK2Q8IWU2 1503 aa31.37■■■□□ 2.61
COL19A1-203ENST00000478620 UNC13BO14795 1591 aa31.35■■■□□ 2.61
COL19A1-203ENST00000478620 ERVK-7P63135 1459 aa31.33■■■□□ 2.61
COL19A1-203ENST00000478620 GCC2Q8IWJ2 1684 aa31.32■■■□□ 2.6
COL19A1-203ENST00000478620 MYO3AQ8NEV4 1616 aa31.3■■■□□ 2.6
COL19A1-203ENST00000478620 A2ML1A8K2U0 1454 aa31.28■■■□□ 2.6
COL19A1-203ENST00000478620 SPATA31D1Q6ZQQ2 1576 aa31.28■■■□□ 2.6
COL19A1-203ENST00000478620 NLRP1Q9C000 1473 aa31.27■■■□□ 2.6
COL19A1-203ENST00000478620 THEMISQ8N1K5 641 aaPredicted RBP31.27■■■□□ 2.6
COL19A1-203ENST00000478620 EFCAB6Q5THR3 1501 aa31.27■■■□□ 2.6
COL19A1-203ENST00000478620 CEP170BQ9Y4F5 1589 aaPredicted RBP31.26■■■□□ 2.6
COL19A1-203ENST00000478620 STAG3Q9UJ98 1225 aa31.25■■■□□ 2.59
COL19A1-203ENST00000478620 TET3O43151 1660 aa31.25■■■□□ 2.59
COL19A1-203ENST00000478620 IQGAP3Q86VI3 1631 aa31.24■■■□□ 2.59
COL19A1-203ENST00000478620 SETD5Q9C0A6 1442 aa31.23■■■□□ 2.59
COL19A1-203ENST00000478620 DMRT2Q9Y5R5 561 aa31.22■■■□□ 2.59
COL19A1-203ENST00000478620 RPRD2Q5VT52 1461 aaKnown RBP31.21■■■□□ 2.59
COL19A1-203ENST00000478620 SLC4A1APQ9BWU0 796 aaKnown RBP31.2■■■□□ 2.59
COL19A1-203ENST00000478620 ZNF142P52746 1687 aaPredicted RBP31.19■■■□□ 2.58
COL19A1-203ENST00000478620 IDI1Q13907 227 aa31.19■■■□□ 2.58
COL19A1-203ENST00000478620 NCKAP5LQ9HCH0 1330 aa31.19■■■□□ 2.58
COL19A1-203ENST00000478620 SLC52A1Q9NWF4 448 aa31.18■■■□□ 2.58
COL19A1-203ENST00000478620 ACIN1Q9UKV3 1341 aaKnown RBP31.17■■■□□ 2.58
COL19A1-203ENST00000478620 UGGT1Q9NYU2 1555 aa31.17■■■□□ 2.58
COL19A1-203ENST00000478620 NOS1P29475 1434 aa31.16■■■□□ 2.58
COL19A1-203ENST00000478620 PKD2Q13563 968 aa31.15■■■□□ 2.58
COL19A1-203ENST00000478620 ANKLE2Q86XL3 938 aa31.13■■■□□ 2.57
COL19A1-203ENST00000478620 E9PCH4 1651 aa31.13■■■□□ 2.57
COL19A1-203ENST00000478620 CHGAP10645 457 aaKnown RBP31.11■■■□□ 2.57
COL19A1-203ENST00000478620 RAB3GAP2Q9H2M9 1393 aa31.1■■■□□ 2.57
COL19A1-203ENST00000478620 PLA2R1Q13018 1463 aa31.09■■■□□ 2.57
COL19A1-203ENST00000478620 SYNMO15061 1565 aa31.09■■■□□ 2.57
COL19A1-203ENST00000478620 MPHOSPH9Q99550 1183 aa31.08■■■□□ 2.57
COL19A1-203ENST00000478620 STRCQ7RTU9 1775 aa31.07■■■□□ 2.56
COL19A1-203ENST00000478620 EID1Q9Y6B2 187 aa31.04■■■□□ 2.56
COL19A1-203ENST00000478620 PIK3C2BO00750 1634 aa31.04■■■□□ 2.56
COL19A1-203ENST00000478620 TXNDC2Q86VQ3 553 aa31.02■■■□□ 2.56
COL19A1-203ENST00000478620 PTPRTO14522 1441 aa31.01■■■□□ 2.55
COL19A1-203ENST00000478620 FOXD1Q16676 465 aa31.01■■■□□ 2.55
COL19A1-203ENST00000478620 UBR1Q8IWV7 1749 aa31.01■■■□□ 2.55
COL19A1-203ENST00000478620 HRCP23327 699 aa30.99■■■□□ 2.55
COL19A1-203ENST00000478620 TRIM26Q12899 539 aaPredicted RBP30.98■■■□□ 2.55
COL19A1-203ENST00000478620 TMEM2Q9UHN6 1383 aa30.96■■■□□ 2.55
COL19A1-203ENST00000478620 HDGFP51858 240 aaKnown RBP30.96■■■□□ 2.55
COL19A1-203ENST00000478620 LTKP29376 864 aa30.94■■■□□ 2.54
COL19A1-203ENST00000478620 ADGRB3O60242 1522 aa30.93■■■□□ 2.54
COL19A1-203ENST00000478620 SPHKAPQ2M3C7 1700 aa30.93■■■□□ 2.54
COL19A1-203ENST00000478620 ZNF326Q5BKZ1 582 aaKnown RBP30.91■■■□□ 2.54
COL19A1-203ENST00000478620 BCANQ96GW7 911 aa30.91■■■□□ 2.54
COL19A1-203ENST00000478620 NPHP4O75161 1426 aaPredicted RBP30.9■■■□□ 2.54
COL19A1-203ENST00000478620 PPP1R15AO75807 674 aaPredicted RBP30.9■■■□□ 2.54
COL19A1-203ENST00000478620 SLIT1O75093 1534 aa30.89■■■□□ 2.54
COL19A1-203ENST00000478620 KDM5AP29375 1690 aaKnown RBP30.89■■■□□ 2.54
COL19A1-203ENST00000478620 SCAF11Q99590 1463 aaKnown RBP30.89■■■□□ 2.53
COL19A1-203ENST00000478620 ARHGAP23Q9P227 1491 aa30.89■■■□□ 2.53
COL19A1-203ENST00000478620 POLR1AO95602 1720 aaPredicted RBP30.88■■■□□ 2.53
COL19A1-203ENST00000478620 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.86■■■□□ 2.53
COL19A1-203ENST00000478620 TMEM131LA2VDJ0 1609 aa30.85■■■□□ 2.53
COL19A1-203ENST00000478620 TRPM2O94759 1503 aa30.85■■■□□ 2.53
COL19A1-203ENST00000478620 RIMS2Q9UQ26 1411 aa30.84■■■□□ 2.53
COL19A1-203ENST00000478620 NUTM2DQ5VT03 806 aaPredicted RBP30.84■■■□□ 2.53
COL19A1-203ENST00000478620 SENP3Q9H4L4 574 aaPredicted RBP30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms