RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 ESF1Q9H501 851 aaKnown RBP29.31■■■□□ 2.28
SREBF1-212ENST00000478616 UHRF1BP1Q6BDS2 1440 aa29.3■■■□□ 2.28
SREBF1-212ENST00000478616 PPP6R1Q9UPN7 881 aa29.3■■■□□ 2.28
SREBF1-212ENST00000478616 KDM5DQ9BY66 1539 aa29.29■■■□□ 2.28
SREBF1-212ENST00000478616 DUOX2Q9NRD8 1548 aa29.28■■■□□ 2.28
SREBF1-212ENST00000478616 FAM135AQ9P2D6 1515 aa29.28■■■□□ 2.28
SREBF1-212ENST00000478616 MYO3AQ8NEV4 1616 aa29.27■■■□□ 2.28
SREBF1-212ENST00000478616 ZNF142P52746 1687 aaPredicted RBP29.25■■■□□ 2.27
SREBF1-212ENST00000478616 ABCC3O15438 1527 aa29.23■■■□□ 2.27
SREBF1-212ENST00000478616 KIF15Q9NS87 1388 aa29.23■■■□□ 2.27
SREBF1-212ENST00000478616 CEP152O94986 1710 aa29.22■■■□□ 2.27
SREBF1-212ENST00000478616 PZPP20742 1482 aa29.2■■■□□ 2.26
SREBF1-212ENST00000478616 DEPDC5O75140 1603 aa29.2■■■□□ 2.26
SREBF1-212ENST00000478616 ZC3H13Q5T200 1668 aaKnown RBP29.19■■■□□ 2.26
SREBF1-212ENST00000478616 ADGRL2O95490 1459 aa29.19■■■□□ 2.26
SREBF1-212ENST00000478616 NCOA1Q15788 1441 aa29.19■■■□□ 2.26
SREBF1-212ENST00000478616 PPARGC1BQ86YN6 1023 aaKnown RBP29.18■■■□□ 2.26
SREBF1-212ENST00000478616 FBXO31Q5XUX0 539 aaPredicted RBP29.17■■■□□ 2.26
SREBF1-212ENST00000478616 RRP7BPQ9NSQ0 103 aa29.17■■■□□ 2.26
SREBF1-212ENST00000478616 ERBINQ96RT1 1412 aa29.17■■■□□ 2.26
SREBF1-212ENST00000478616 CEP170BQ9Y4F5 1589 aaPredicted RBP29.17■■■□□ 2.26
SREBF1-212ENST00000478616 PRDM15P57071 1507 aaPredicted RBP29.16■■■□□ 2.26
SREBF1-212ENST00000478616 CHIC2Q9UKJ5 165 aa29.16■■■□□ 2.26
SREBF1-212ENST00000478616 WASHC2CQ9Y4E1 1318 aa29.14■■■□□ 2.25
SREBF1-212ENST00000478616 CAMSAP1Q5T5Y3 1602 aa29.13■■■□□ 2.25
SREBF1-212ENST00000478616 FAM50AQ14320 339 aaKnown RBP29.11■■■□□ 2.25
SREBF1-212ENST00000478616 VWDEQ8N2E2 1590 aa29.09■■■□□ 2.25
SREBF1-212ENST00000478616 CFAP65Q6ZU64 1925 aaKnown RBP29.09■■■□□ 2.25
SREBF1-212ENST00000478616 ANKRD30AQ9BXX3 1397 aa29.09■■■□□ 2.25
SREBF1-212ENST00000478616 SPATA31D1Q6ZQQ2 1576 aa29.08■■■□□ 2.25
SREBF1-212ENST00000478616 A2ML1A8K2U0 1454 aa29.07■■■□□ 2.24
SREBF1-212ENST00000478616 TNRQ92752 1358 aa29.06■■■□□ 2.24
SREBF1-212ENST00000478616 ILDR1Q86SU0 546 aaPredicted RBP29.03■■■□□ 2.24
SREBF1-212ENST00000478616 ERVK-7P63135 1459 aa29.03■■■□□ 2.24
SREBF1-212ENST00000478616 PLA2R1Q13018 1463 aa29.01■■■□□ 2.23
SREBF1-212ENST00000478616 PTPRTO14522 1441 aa29.01■■■□□ 2.23
SREBF1-212ENST00000478616 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.99■■■□□ 2.233e-17■■■■■ 34.8
SREBF1-212ENST00000478616 LMTK2Q8IWU2 1503 aa28.99■■■□□ 2.23
SREBF1-212ENST00000478616 ARHGAP31Q2M1Z3 1444 aa28.98■■■□□ 2.23
SREBF1-212ENST00000478616 RRBP1Q9P2E9 1410 aaKnown RBP28.96■■■□□ 2.23
SREBF1-212ENST00000478616 ANKRD50Q9ULJ7 1429 aa28.96■■■□□ 2.23
SREBF1-212ENST00000478616 NCKAP5LQ9HCH0 1330 aa28.95■■■□□ 2.23
SREBF1-212ENST00000478616 NEURL4Q96JN8 1562 aa28.94■■■□□ 2.22
SREBF1-212ENST00000478616 NLRP1Q9C000 1473 aa28.94■■■□□ 2.22
SREBF1-212ENST00000478616 ROCK1Q13464 1354 aa28.93■■■□□ 2.22
SREBF1-212ENST00000478616 UNC13BO14795 1591 aa28.92■■■□□ 2.22
SREBF1-212ENST00000478616 POLR1AO95602 1720 aaPredicted RBP28.92■■■□□ 2.22
SREBF1-212ENST00000478616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.92■■■□□ 2.22
SREBF1-212ENST00000478616 LTBP4Q8N2S1 1624 aa28.91■■■□□ 2.22
SREBF1-212ENST00000478616 UBR1Q8IWV7 1749 aa28.9■■■□□ 2.22
SREBF1-212ENST00000478616 EFCAB6Q5THR3 1501 aa28.89■■■□□ 2.22
SREBF1-212ENST00000478616 DMRT2Q9Y5R5 561 aa28.89■■■□□ 2.22
SREBF1-212ENST00000478616 UGGT1Q9NYU2 1555 aa28.88■■■□□ 2.21
SREBF1-212ENST00000478616 SYNMO15061 1565 aa28.87■■■□□ 2.21
SREBF1-212ENST00000478616 PKD2Q13563 968 aa28.83■■■□□ 2.21
SREBF1-212ENST00000478616 PIK3C2BO00750 1634 aa28.83■■■□□ 2.21
SREBF1-212ENST00000478616 TET3O43151 1660 aa28.83■■■□□ 2.21
SREBF1-212ENST00000478616 ITGAEP38570 1179 aa28.82■■■□□ 2.2
SREBF1-212ENST00000478616 KANK1Q14678 1352 aa28.82■■■□□ 2.2
SREBF1-212ENST00000478616 NOS1P29475 1434 aa28.82■■■□□ 2.2
SREBF1-212ENST00000478616 CERKQ8TCT0 537 aa28.81■■■□□ 2.2
SREBF1-212ENST00000478616 GCC2Q8IWJ2 1684 aa28.8■■■□□ 2.2
SREBF1-212ENST00000478616 FBXO41Q8TF61 875 aa28.79■■■□□ 2.2
SREBF1-212ENST00000478616 IQGAP3Q86VI3 1631 aa28.79■■■□□ 2.2
SREBF1-212ENST00000478616 E9PCH4 1651 aa28.77■■■□□ 2.2
SREBF1-212ENST00000478616 MED14O60244 1454 aa28.76■■■□□ 2.19
SREBF1-212ENST00000478616 ARHGAP23Q9P227 1491 aa28.75■■■□□ 2.19
SREBF1-212ENST00000478616 THEMISQ8N1K5 641 aaPredicted RBP28.74■■■□□ 2.19
SREBF1-212ENST00000478616 ZNF335Q9H4Z2 1342 aaPredicted RBP28.73■■■□□ 2.19
SREBF1-212ENST00000478616 KDM5AP29375 1690 aaKnown RBP28.73■■■□□ 2.19
SREBF1-212ENST00000478616 SLIT1O75093 1534 aa28.72■■■□□ 2.19
SREBF1-212ENST00000478616 RPRD2Q5VT52 1461 aaKnown RBP28.72■■■□□ 2.19
SREBF1-212ENST00000478616 IQGAP1P46940 1657 aa28.7■■■□□ 2.18
SREBF1-212ENST00000478616 NAIPQ13075 1403 aa28.69■■■□□ 2.18
SREBF1-212ENST00000478616 MYO5BQ9ULV0 1848 aa28.69■■■□□ 2.18
SREBF1-212ENST00000478616 IDI1Q13907 227 aa28.69■■■□□ 2.18
SREBF1-212ENST00000478616 STRCP1A6NGW2 1772 aa28.67■■■□□ 2.18
SREBF1-212ENST00000478616 NPHP4O75161 1426 aaPredicted RBP28.67■■■□□ 2.18
SREBF1-212ENST00000478616 ANKLE2Q86XL3 938 aa28.66■■■□□ 2.18
SREBF1-212ENST00000478616 LTKP29376 864 aa28.65■■■□□ 2.18
SREBF1-212ENST00000478616 ADGRB3O60242 1522 aa28.64■■■□□ 2.17
SREBF1-212ENST00000478616 NUP155O75694 1391 aa28.62■■■□□ 2.17
SREBF1-212ENST00000478616 SCAF11Q99590 1463 aaKnown RBP28.61■■■□□ 2.17
SREBF1-212ENST00000478616 TMEM131LA2VDJ0 1609 aa28.6■■■□□ 2.17
SREBF1-212ENST00000478616 TMEM2Q9UHN6 1383 aa28.6■■■□□ 2.17
SREBF1-212ENST00000478616 IQSEC2Q5JU85 1478 aa28.59■■■□□ 2.17
SREBF1-212ENST00000478616 HFM1A2PYH4 1435 aa28.58■■■□□ 2.17
SREBF1-212ENST00000478616 SLC52A1Q9NWF4 448 aa28.54■■■□□ 2.16
SREBF1-212ENST00000478616 SPHKAPQ2M3C7 1700 aa28.53■■■□□ 2.16
SREBF1-212ENST00000478616 TXNDC2Q86VQ3 553 aa28.52■■■□□ 2.16
SREBF1-212ENST00000478616 ZFYVE9O95405 1425 aa28.52■■■□□ 2.16
SREBF1-212ENST00000478616 CPS1P31327 1500 aa28.49■■■□□ 2.15
SREBF1-212ENST00000478616 ALKQ9UM73 1620 aa28.45■■■□□ 2.14
SREBF1-212ENST00000478616 XIRP1Q702N8 1843 aaKnown RBP28.45■■■□□ 2.14
SREBF1-212ENST00000478616 STAG3Q9UJ98 1225 aa28.43■■■□□ 2.14
SREBF1-212ENST00000478616 CLTCL1P53675 1640 aa28.42■■■□□ 2.14
SREBF1-212ENST00000478616 LRRC7Q96NW7 1537 aa28.41■■■□□ 2.14
SREBF1-212ENST00000478616 RIMS2Q9UQ26 1411 aa28.4■■■□□ 2.14
SREBF1-212ENST00000478616 EID1Q9Y6B2 187 aa28.39■■■□□ 2.14
SREBF1-212ENST00000478616 TRPM2O94759 1503 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms