RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 DMRT2Q9Y5R5 561 aa8.88□□□□□ -0.99
TRA2B-211ENST00000477939 VPS8Q8N3P4 1428 aa8.88□□□□□ -0.99
TRA2B-211ENST00000477939 PLA2R1Q13018 1463 aa8.87□□□□□ -0.99
TRA2B-211ENST00000477939 LRRC9Q6ZRR7 1453 aa8.87□□□□□ -0.99
TRA2B-211ENST00000477939 KDM5DQ9BY66 1539 aa8.86□□□□□ -0.99
TRA2B-211ENST00000477939 FAM135AQ9P2D6 1515 aa8.86□□□□□ -0.99
TRA2B-211ENST00000477939 TCOF1Q13428 1488 aaKnown RBP8.86□□□□□ -0.99
TRA2B-211ENST00000477939 GGT6Q6P531 493 aa8.86□□□□□ -0.99
TRA2B-211ENST00000477939 DHX29Q7Z478 1369 aaKnown RBP8.86□□□□□ -0.99
TRA2B-211ENST00000477939 DNMT1P26358 1616 aaKnown RBP8.85□□□□□ -0.99
TRA2B-211ENST00000477939 PZPP20742 1482 aa8.84□□□□□ -0.99
TRA2B-211ENST00000477939 IQSEC2Q5JU85 1478 aa8.84□□□□□ -0.99
TRA2B-211ENST00000477939 RNF17Q9BXT8 1623 aaKnown RBP8.84□□□□□ -0.99
TRA2B-211ENST00000477939 POLR1AO95602 1720 aaPredicted RBP8.84□□□□□ -0.99
TRA2B-211ENST00000477939 MAST1Q9Y2H9 1570 aa8.84□□□□□ -0.99
TRA2B-211ENST00000477939 MAP3K1Q13233 1512 aa8.84□□□□□ -0.99
TRA2B-211ENST00000477939 A2ML1A8K2U0 1454 aa8.83□□□□□ -1
TRA2B-211ENST00000477939 HOMEZQ8IX15 550 aa8.83□□□□□ -1
TRA2B-211ENST00000477939 PPP6R1Q9UPN7 881 aa8.83□□□□□ -1
TRA2B-211ENST00000477939 MROH1Q8NDA8 1641 aa8.83□□□□□ -1
TRA2B-211ENST00000477939 NCKAP5LQ9HCH0 1330 aa8.82□□□□□ -1
TRA2B-211ENST00000477939 NEURL4Q96JN8 1562 aa8.82□□□□□ -1
TRA2B-211ENST00000477939 LOC105371045A0A1W2PR82 267 aa8.82□□□□□ -1
TRA2B-211ENST00000477939 EIF2AK4Q9P2K8 1649 aaKnown RBP8.82□□□□□ -1
TRA2B-211ENST00000477939 ZC3H13Q5T200 1668 aaKnown RBP8.81□□□□□ -1
TRA2B-211ENST00000477939 ZNF335Q9H4Z2 1342 aaPredicted RBP8.81□□□□□ -1
TRA2B-211ENST00000477939 KIF3BO15066 747 aa8.81□□□□□ -1
TRA2B-211ENST00000477939 KANK4Q5T7N3 995 aaPredicted RBP8.81□□□□□ -1
TRA2B-211ENST00000477939 RTN4Q9NQC3 1192 aaKnown RBP8.81□□□□□ -1
TRA2B-211ENST00000477939 CROCC2H7BZ55 1655 aa8.81□□□□□ -1
TRA2B-211ENST00000477939 MYOM3Q5VTT5 1437 aa8.8□□□□□ -1
TRA2B-211ENST00000477939 ABCC3O15438 1527 aa8.8□□□□□ -1
TRA2B-211ENST00000477939 PKD2Q13563 968 aa8.8□□□□□ -1
TRA2B-211ENST00000477939 RSPH4AQ5TD94 716 aa8.8□□□□□ -1
TRA2B-211ENST00000477939 FBXO31Q5XUX0 539 aaPredicted RBP8.8□□□□□ -1
TRA2B-211ENST00000477939 UBE2Q2Q8WVN8 375 aa8.8□□□□□ -1
TRA2B-211ENST00000477939 TNRQ92752 1358 aa8.8□□□□□ -1
TRA2B-211ENST00000477939 MIA2Q96PC5 1412 aa8.8□□□□□ -1
TRA2B-211ENST00000477939 CEP152O94986 1710 aa8.79□□□□□ -1
TRA2B-211ENST00000477939 SPATA31D1Q6ZQQ2 1576 aa8.78□□□□□ -1
TRA2B-211ENST00000477939 NLRP1Q9C000 1473 aa8.78□□□□□ -1
TRA2B-211ENST00000477939 WASHC2CQ9Y4E1 1318 aa8.78□□□□□ -1
TRA2B-211ENST00000477939 UGGT1Q9NYU2 1555 aa8.78□□□□□ -1
TRA2B-211ENST00000477939 SHANK2Q9UPX8 1470 aa8.77□□□□□ -1
TRA2B-211ENST00000477939 DEPDC5O75140 1603 aa8.77□□□□□ -1.01
TRA2B-211ENST00000477939 PTPN23Q9H3S7 1636 aa8.77□□□□□ -1.01
TRA2B-211ENST00000477939 PRDM15P57071 1507 aaPredicted RBP8.77□□□□□ -1.01
TRA2B-211ENST00000477939 TSPY4P0CV99 314 aa8.77□□□□□ -1.01
TRA2B-211ENST00000477939 TSPY10P0CW01 314 aa8.77□□□□□ -1.01
TRA2B-211ENST00000477939 ERVK-7P63135 1459 aa8.77□□□□□ -1.01
TRA2B-211ENST00000477939 DUOX2Q9NRD8 1548 aa8.76□□□□□ -1.01
TRA2B-211ENST00000477939 VWDEQ8N2E2 1590 aa8.76□□□□□ -1.01
TRA2B-211ENST00000477939 SCAF1Q9H7N4 1312 aaKnown RBP8.76□□□□□ -1.01
TRA2B-211ENST00000477939 IQGAP1P46940 1657 aa8.75□□□□□ -1.01
TRA2B-211ENST00000477939 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.75□□□□□ -1.01
TRA2B-211ENST00000477939 ABCC5O15440 1437 aa8.75□□□□□ -1.01
TRA2B-211ENST00000477939 MED14O60244 1454 aa8.75□□□□□ -1.01
TRA2B-211ENST00000477939 CPS1P31327 1500 aa8.75□□□□□ -1.01
TRA2B-211ENST00000477939 DISP3Q9P2K9 1392 aa8.74□□□□□ -1.01
TRA2B-211ENST00000477939 UBR1Q8IWV7 1749 aa8.74□□□□□ -1.01
TRA2B-211ENST00000477939 ERBINQ96RT1 1412 aa8.74□□□□□ -1.01
TRA2B-211ENST00000477939 CFAP65Q6ZU64 1925 aaKnown RBP8.74□□□□□ -1.01
TRA2B-211ENST00000477939 KIF15Q9NS87 1388 aa8.73□□□□□ -1.01
TRA2B-211ENST00000477939 STRCP1A6NGW2 1772 aa8.73□□□□□ -1.01
TRA2B-211ENST00000477939 DAPK1P53355 1430 aa8.73□□□□□ -1.01
TRA2B-211ENST00000477939 FGD6Q6ZV73 1430 aa8.73□□□□□ -1.01
TRA2B-211ENST00000477939 ALKQ9UM73 1620 aa8.72□□□□□ -1.01
TRA2B-211ENST00000477939 NPHP4O75161 1426 aaPredicted RBP8.72□□□□□ -1.01
TRA2B-211ENST00000477939 UBAP1LF5GYI3 381 aa8.72□□□□□ -1.01
TRA2B-211ENST00000477939 ILDR2Q71H61 639 aa8.72□□□□□ -1.01
TRA2B-211ENST00000477939 ANKLE2Q86XL3 938 aa8.71□□□□□ -1.02
TRA2B-211ENST00000477939 THEMISQ8N1K5 641 aaPredicted RBP8.71□□□□□ -1.02
TRA2B-211ENST00000477939 PODXL2Q9NZ53 605 aa8.71□□□□□ -1.02
TRA2B-211ENST00000477939 ARHGAP31Q2M1Z3 1444 aa8.71□□□□□ -1.02
TRA2B-211ENST00000477939 SYNMO15061 1565 aa8.7□□□□□ -1.02
TRA2B-211ENST00000477939 PIK3C2BO00750 1634 aa8.7□□□□□ -1.02
TRA2B-211ENST00000477939 SCAF11Q99590 1463 aaKnown RBP8.7□□□□□ -1.02
TRA2B-211ENST00000477939 ARHGAP23Q9P227 1491 aa8.7□□□□□ -1.02
TRA2B-211ENST00000477939 SLIT1O75093 1534 aa8.7□□□□□ -1.02
TRA2B-211ENST00000477939 RRP7BPQ9NSQ0 103 aa8.69□□□□□ -1.02
TRA2B-211ENST00000477939 LMTK2Q8IWU2 1503 aa8.69□□□□□ -1.02
TRA2B-211ENST00000477939 ADGRL2O95490 1459 aa8.68□□□□□ -1.02
TRA2B-211ENST00000477939 EFCAB6Q5THR3 1501 aa8.68□□□□□ -1.02
TRA2B-211ENST00000477939 LRRC7Q96NW7 1537 aa8.68□□□□□ -1.02
TRA2B-211ENST00000477939 KDM5AP29375 1690 aaKnown RBP8.68□□□□□ -1.02
TRA2B-211ENST00000477939 XIRP1Q702N8 1843 aaKnown RBP8.66□□□□□ -1.02
TRA2B-211ENST00000477939 MED1Q15648 1581 aaPredicted RBP8.66□□□□□ -1.02
TRA2B-211ENST00000477939 ANKRD30AQ9BXX3 1397 aa8.66□□□□□ -1.02
TRA2B-211ENST00000477939 NEFLP07196 543 aa8.65□□□□□ -1.02
TRA2B-211ENST00000477939 LTKP29376 864 aa8.65□□□□□ -1.02
TRA2B-211ENST00000477939 HSPA1LP34931 641 aa8.65□□□□□ -1.02
TRA2B-211ENST00000477939 PIP4K2BP78356 416 aa8.65□□□□□ -1.02
TRA2B-211ENST00000477939 ANP32EQ9BTT0 268 aa8.65□□□□□ -1.02
TRA2B-211ENST00000477939 CHIC2Q9UKJ5 165 aa8.65□□□□□ -1.02
TRA2B-211ENST00000477939 TIMELESSQ9UNS1 1208 aa8.65□□□□□ -1.02
TRA2B-211ENST00000477939 ADGRB3O60242 1522 aa8.64□□□□□ -1.03
TRA2B-211ENST00000477939 NOS1P29475 1434 aa8.64□□□□□ -1.03
TRA2B-211ENST00000477939 KANK1Q14678 1352 aa8.64□□□□□ -1.03
TRA2B-211ENST00000477939 TMEM2Q9UHN6 1383 aa8.64□□□□□ -1.03
TRA2B-211ENST00000477939 SOCS7O14512 581 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms