RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 RNF17Q9BXT8 1623 aaKnown RBP25.19■■□□□ 1.62
EPHB4-204ENST00000477446 SETD5Q9C0A6 1442 aa25.16■■□□□ 1.62
EPHB4-204ENST00000477446 DEPDC5O75140 1603 aa25.16■■□□□ 1.62
EPHB4-204ENST00000477446 MROH1Q8NDA8 1641 aa25.16■■□□□ 1.62
EPHB4-204ENST00000477446 AEBP2Q6ZN18 517 aaPredicted RBP25.15■■□□□ 1.62
EPHB4-204ENST00000477446 ADAMTSL3P82987 1691 aa25.15■■□□□ 1.62
EPHB4-204ENST00000477446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.12■■□□□ 1.614e-6■□□□□ 11.1
EPHB4-204ENST00000477446 PRDM15P57071 1507 aaPredicted RBP25.12■■□□□ 1.61
EPHB4-204ENST00000477446 UNC13BO14795 1591 aa25.11■■□□□ 1.61
EPHB4-204ENST00000477446 PPP6R1Q9UPN7 881 aa25.1■■□□□ 1.61
EPHB4-204ENST00000477446 FER1L4A9Z1Z3 1794 aa25.1■■□□□ 1.61
EPHB4-204ENST00000477446 MADDQ8WXG6 1647 aa25.1■■□□□ 1.61
EPHB4-204ENST00000477446 RAB3GAP2Q9H2M9 1393 aa25.09■■□□□ 1.61
EPHB4-204ENST00000477446 KDM4FA0A1W2PPD8 638 aa25.08■■□□□ 1.61
EPHB4-204ENST00000477446 CLTCQ00610 1675 aaKnown RBP25.06■■□□□ 1.6
EPHB4-204ENST00000477446 VWDEQ8N2E2 1590 aa25.06■■□□□ 1.6
EPHB4-204ENST00000477446 WASHC2CQ9Y4E1 1318 aa25.06■■□□□ 1.6
EPHB4-204ENST00000477446 KANK1Q14678 1352 aa25.06■■□□□ 1.6
EPHB4-204ENST00000477446 KDM5DQ9BY66 1539 aa25.06■■□□□ 1.6
EPHB4-204ENST00000477446 ESF1Q9H501 851 aaKnown RBP25.05■■□□□ 1.6
EPHB4-204ENST00000477446 CEP152O94986 1710 aa25.05■■□□□ 1.6
EPHB4-204ENST00000477446 RIMS1Q86UR5 1692 aaKnown RBP25.04■■□□□ 1.6
EPHB4-204ENST00000477446 FAM135AQ9P2D6 1515 aa25.04■■□□□ 1.6
EPHB4-204ENST00000477446 ZC3H13Q5T200 1668 aaKnown RBP25.04■■□□□ 1.6
EPHB4-204ENST00000477446 ABCC3O15438 1527 aa25.04■■□□□ 1.6
EPHB4-204ENST00000477446 NUP155O75694 1391 aa25.03■■□□□ 1.6
EPHB4-204ENST00000477446 CNTLNQ9NXG0 1405 aa25.02■■□□□ 1.6
EPHB4-204ENST00000477446 TRIM52Q96A61 297 aa25.01■■□□□ 1.59
EPHB4-204ENST00000477446 IQGAP3Q86VI3 1631 aa25.01■■□□□ 1.59
EPHB4-204ENST00000477446 MROH2AA6NES4 1674 aa24.99■■□□□ 1.59
EPHB4-204ENST00000477446 LMTK2Q8IWU2 1503 aa24.98■■□□□ 1.59
EPHB4-204ENST00000477446 CAMSAP1Q5T5Y3 1602 aa24.97■■□□□ 1.59
EPHB4-204ENST00000477446 ZMYM3Q14202 1370 aa24.97■■□□□ 1.59
EPHB4-204ENST00000477446 ACIN1Q9UKV3 1341 aaKnown RBP24.97■■□□□ 1.59
EPHB4-204ENST00000477446 PTPRMP28827 1452 aa24.95■■□□□ 1.58
EPHB4-204ENST00000477446 TET3O43151 1660 aa24.94■■□□□ 1.58
EPHB4-204ENST00000477446 C3P01024 1663 aa24.94■■□□□ 1.58
EPHB4-204ENST00000477446 PZPP20742 1482 aa24.94■■□□□ 1.58
EPHB4-204ENST00000477446 CEBPAP49715 358 aaPredicted RBP24.93■■□□□ 1.58
EPHB4-204ENST00000477446 EFCAB6Q5THR3 1501 aa24.91■■□□□ 1.58
EPHB4-204ENST00000477446 PLPPR3Q6T4P5 718 aa24.9■■□□□ 1.58
EPHB4-204ENST00000477446 ARHGAP31Q2M1Z3 1444 aa24.89■■□□□ 1.58
EPHB4-204ENST00000477446 SLC4A1APQ9BWU0 796 aaKnown RBP24.89■■□□□ 1.58
EPHB4-204ENST00000477446 CFAP65Q6ZU64 1925 aaKnown RBP24.88■■□□□ 1.57
EPHB4-204ENST00000477446 E9PCH4 1651 aa24.88■■□□□ 1.57
EPHB4-204ENST00000477446 NPATQ14207 1427 aa24.88■■□□□ 1.57
EPHB4-204ENST00000477446 MPHOSPH9Q99550 1183 aa24.88■■□□□ 1.57
EPHB4-204ENST00000477446 FBXO31Q5XUX0 539 aaPredicted RBP24.86■■□□□ 1.57
EPHB4-204ENST00000477446 PKD2Q13563 968 aa24.84■■□□□ 1.57
EPHB4-204ENST00000477446 RPRD2Q5VT52 1461 aaKnown RBP24.83■■□□□ 1.57
EPHB4-204ENST00000477446 PREX1Q8TCU6 1659 aa24.83■■□□□ 1.56
EPHB4-204ENST00000477446 ERVK-7P63135 1459 aa24.8■■□□□ 1.56
EPHB4-204ENST00000477446 SPATA31D1Q6ZQQ2 1576 aa24.8■■□□□ 1.56
EPHB4-204ENST00000477446 FOXD1Q16676 465 aa24.79■■□□□ 1.56
EPHB4-204ENST00000477446 NOS1P29475 1434 aa24.76■■□□□ 1.55
EPHB4-204ENST00000477446 CCER1Q8TC90 406 aaPredicted RBP24.76■■□□□ 1.55
EPHB4-204ENST00000477446 SETD1BQ9UPS6 1966 aaKnown RBP24.76■■□□□ 1.55
EPHB4-204ENST00000477446 SPHKAPQ2M3C7 1700 aa24.74■■□□□ 1.55
EPHB4-204ENST00000477446 TNRQ92752 1358 aa24.74■■□□□ 1.55
EPHB4-204ENST00000477446 SYNMO15061 1565 aa24.74■■□□□ 1.55
EPHB4-204ENST00000477446 PTPRTO14522 1441 aa24.73■■□□□ 1.55
EPHB4-204ENST00000477446 DHX57Q6P158 1386 aaKnown RBP24.7■■□□□ 1.55
EPHB4-204ENST00000477446 PLA2R1Q13018 1463 aa24.7■■□□□ 1.54
EPHB4-204ENST00000477446 MYO3AQ8NEV4 1616 aa24.68■■□□□ 1.54
EPHB4-204ENST00000477446 TRPM2O94759 1503 aa24.68■■□□□ 1.54
EPHB4-204ENST00000477446 UGGT1Q9NYU2 1555 aa24.67■■□□□ 1.54
EPHB4-204ENST00000477446 PIK3C2BO00750 1634 aa24.65■■□□□ 1.54
EPHB4-204ENST00000477446 IDI1Q13907 227 aa24.65■■□□□ 1.54
EPHB4-204ENST00000477446 NLRP1Q9C000 1473 aa24.65■■□□□ 1.54
EPHB4-204ENST00000477446 SLC52A1Q9NWF4 448 aa24.64■■□□□ 1.54
EPHB4-204ENST00000477446 UHRF1BP1Q6BDS2 1440 aa24.64■■□□□ 1.54
EPHB4-204ENST00000477446 ANKRD30BQ9BXX2 1392 aa24.64■■□□□ 1.53
EPHB4-204ENST00000477446 CLTCL1P53675 1640 aa24.63■■□□□ 1.53
EPHB4-204ENST00000477446 ZNF142P52746 1687 aaPredicted RBP24.61■■□□□ 1.53
EPHB4-204ENST00000477446 CEP170BQ9Y4F5 1589 aaPredicted RBP24.61■■□□□ 1.53
EPHB4-204ENST00000477446 A2ML1A8K2U0 1454 aa24.6■■□□□ 1.53
EPHB4-204ENST00000477446 CCDC144AA2RUR9 1427 aa24.58■■□□□ 1.53
EPHB4-204ENST00000477446 LMTK3Q96Q04 1460 aa24.57■■□□□ 1.52
EPHB4-204ENST00000477446 UBR1Q8IWV7 1749 aa24.57■■□□□ 1.52
EPHB4-204ENST00000477446 KIF1BO60333 1816 aa24.55■■□□□ 1.52
EPHB4-204ENST00000477446 TMEM131LA2VDJ0 1609 aa24.54■■□□□ 1.52
EPHB4-204ENST00000477446 MYO5BQ9ULV0 1848 aa24.54■■□□□ 1.52
EPHB4-204ENST00000477446 KDM5AP29375 1690 aaKnown RBP24.54■■□□□ 1.52
EPHB4-204ENST00000477446 STAG3Q9UJ98 1225 aa24.54■■□□□ 1.52
EPHB4-204ENST00000477446 ADGRB3O60242 1522 aa24.53■■□□□ 1.52
EPHB4-204ENST00000477446 CHGAP10645 457 aaKnown RBP24.53■■□□□ 1.52
EPHB4-204ENST00000477446 THEMISQ8N1K5 641 aaPredicted RBP24.5■■□□□ 1.51
EPHB4-204ENST00000477446 HSPA2P54652 639 aa24.49■■□□□ 1.51
EPHB4-204ENST00000477446 SIN3AQ96ST3 1273 aa24.47■■□□□ 1.51
EPHB4-204ENST00000477446 SPATA31E1Q6ZUB1 1445 aa24.45■■□□□ 1.51
EPHB4-204ENST00000477446 TMEM2Q9UHN6 1383 aa24.43■■□□□ 1.5
EPHB4-204ENST00000477446 NEURL4Q96JN8 1562 aa24.42■■□□□ 1.5
EPHB4-204ENST00000477446 RGL3Q3MIN7 710 aa24.42■■□□□ 1.5
EPHB4-204ENST00000477446 ZNF326Q5BKZ1 582 aaKnown RBP24.42■■□□□ 1.5
EPHB4-204ENST00000477446 SLIT1O75093 1534 aa24.42■■□□□ 1.5
EPHB4-204ENST00000477446 NEUROD1Q13562 356 aa24.42■■□□□ 1.5
EPHB4-204ENST00000477446 ARHGAP23Q9P227 1491 aa24.41■■□□□ 1.5
EPHB4-204ENST00000477446 CLSPNQ9HAW4 1339 aa24.41■■□□□ 1.5
EPHB4-204ENST00000477446 ZFYVE9O95405 1425 aa24.38■■□□□ 1.49
EPHB4-204ENST00000477446 RIMS2Q9UQ26 1411 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms