RNA–Protein interactions for RNA: ENST00000477424.2

C4A-253, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-253ENST00000477424 HSPA2P54652 639 aa27.67■■■□□ 2.02
C4A-253ENST00000477424 FAM135AQ9P2D6 1515 aa27.67■■■□□ 2.02
C4A-253ENST00000477424 KIF15Q9NS87 1388 aa27.65■■■□□ 2.02
C4A-253ENST00000477424 FAM50AQ14320 339 aaKnown RBP27.63■■■□□ 2.01
C4A-253ENST00000477424 PPP6R1Q9UPN7 881 aa27.63■■■□□ 2.01
C4A-253ENST00000477424 NPATQ14207 1427 aa27.63■■■□□ 2.01
C4A-253ENST00000477424 UHRF1BP1Q6BDS2 1440 aa27.63■■■□□ 2.01
C4A-253ENST00000477424 CEP152O94986 1710 aa27.62■■■□□ 2.01
C4A-253ENST00000477424 PTPRKQ15262 1439 aa27.62■■■□□ 2.01
C4A-253ENST00000477424 MYO3AQ8NEV4 1616 aa27.62■■■□□ 2.01
C4A-253ENST00000477424 ZC3H13Q5T200 1668 aaKnown RBP27.61■■■□□ 2.01
C4A-253ENST00000477424 ADGRL2O95490 1459 aa27.6■■■□□ 2.01
C4A-253ENST00000477424 ERBINQ96RT1 1412 aa27.59■■■□□ 2.01
C4A-253ENST00000477424 RRP7BPQ9NSQ0 103 aa27.59■■■□□ 2.01
C4A-253ENST00000477424 CHIC2Q9UKJ5 165 aa27.59■■■□□ 2.01
C4A-253ENST00000477424 ABCC3O15438 1527 aa27.58■■■□□ 2.01
C4A-253ENST00000477424 DEPDC5O75140 1603 aa27.58■■■□□ 2.01
C4A-253ENST00000477424 ZNF142P52746 1687 aaPredicted RBP27.58■■■□□ 2.01
C4A-253ENST00000477424 PRDM15P57071 1507 aaPredicted RBP27.57■■■□□ 2
C4A-253ENST00000477424 NCOA1Q15788 1441 aa27.57■■■□□ 2
C4A-253ENST00000477424 STRCQ7RTU9 1775 aa27.56■■■□□ 2
C4A-253ENST00000477424 ANKRD30AQ9BXX3 1397 aa27.56■■■□□ 2
C4A-253ENST00000477424 PZPP20742 1482 aa27.54■■■□□ 2
C4A-253ENST00000477424 CAMSAP1Q5T5Y3 1602 aa27.54■■■□□ 2
C4A-253ENST00000477424 WASHC2CQ9Y4E1 1318 aa27.52■■■□□ 2
C4A-253ENST00000477424 CEP170BQ9Y4F5 1589 aaPredicted RBP27.51■■□□□ 1.99
C4A-253ENST00000477424 CFAP65Q6ZU64 1925 aaKnown RBP27.47■■□□□ 1.99
C4A-253ENST00000477424 FBXO31Q5XUX0 539 aaPredicted RBP27.46■■□□□ 1.99
C4A-253ENST00000477424 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.45■■□□□ 1.98
C4A-253ENST00000477424 VWDEQ8N2E2 1590 aa27.44■■□□□ 1.98
C4A-253ENST00000477424 RRBP1Q9P2E9 1410 aaKnown RBP27.44■■□□□ 1.98
C4A-253ENST00000477424 TNRQ92752 1358 aa27.42■■□□□ 1.98
C4A-253ENST00000477424 SPATA31D1Q6ZQQ2 1576 aa27.42■■□□□ 1.98
C4A-253ENST00000477424 ANKRD50Q9ULJ7 1429 aa27.41■■□□□ 1.98
C4A-253ENST00000477424 A2ML1A8K2U0 1454 aa27.39■■□□□ 1.98
C4A-253ENST00000477424 ERVK-7P63135 1459 aa27.38■■□□□ 1.97
C4A-253ENST00000477424 ROCK1Q13464 1354 aa27.38■■□□□ 1.97
C4A-253ENST00000477424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.37■■□□□ 1.97
C4A-253ENST00000477424 LMTK2Q8IWU2 1503 aa27.36■■□□□ 1.97
C4A-253ENST00000477424 UNC13BO14795 1591 aa27.36■■□□□ 1.97
C4A-253ENST00000477424 ITGAEP38570 1179 aa27.36■■□□□ 1.97
C4A-253ENST00000477424 ARHGAP31Q2M1Z3 1444 aa27.33■■□□□ 1.97
C4A-253ENST00000477424 PLA2R1Q13018 1463 aa27.32■■□□□ 1.96
C4A-253ENST00000477424 KANK1Q14678 1352 aa27.32■■□□□ 1.96
C4A-253ENST00000477424 NLRP1Q9C000 1473 aa27.32■■□□□ 1.96
C4A-253ENST00000477424 EFCAB6Q5THR3 1501 aa27.31■■□□□ 1.96
C4A-253ENST00000477424 POLR1AO95602 1720 aaPredicted RBP27.3■■□□□ 1.96
C4A-253ENST00000477424 TET3O43151 1660 aa27.27■■□□□ 1.96
C4A-253ENST00000477424 GCC2Q8IWJ2 1684 aa27.27■■□□□ 1.96
C4A-253ENST00000477424 UGGT1Q9NYU2 1555 aa27.26■■□□□ 1.96
C4A-253ENST00000477424 PTPRTO14522 1441 aa27.26■■□□□ 1.95
C4A-253ENST00000477424 UBR1Q8IWV7 1749 aa27.26■■□□□ 1.95
C4A-253ENST00000477424 IQGAP3Q86VI3 1631 aa27.24■■□□□ 1.95
C4A-253ENST00000477424 SYNMO15061 1565 aa27.24■■□□□ 1.95
C4A-253ENST00000477424 NEURL4Q96JN8 1562 aa27.23■■□□□ 1.95
C4A-253ENST00000477424 NCKAP5LQ9HCH0 1330 aa27.23■■□□□ 1.95
C4A-253ENST00000477424 PIK3C2BO00750 1634 aa27.21■■□□□ 1.95
C4A-253ENST00000477424 DMRT2Q9Y5R5 561 aa27.2■■□□□ 1.94
C4A-253ENST00000477424 E9PCH4 1651 aa27.2■■□□□ 1.94
C4A-253ENST00000477424 NOS1P29475 1434 aa27.16■■□□□ 1.94
C4A-253ENST00000477424 RPRD2Q5VT52 1461 aaKnown RBP27.15■■□□□ 1.94
C4A-253ENST00000477424 PKD2Q13563 968 aa27.15■■□□□ 1.94
C4A-253ENST00000477424 NAIPQ13075 1403 aa27.15■■□□□ 1.94
C4A-253ENST00000477424 LTBP4Q8N2S1 1624 aa27.12■■□□□ 1.93
C4A-253ENST00000477424 KDM5AP29375 1690 aaKnown RBP27.12■■□□□ 1.93
C4A-253ENST00000477424 ILDR1Q86SU0 546 aaPredicted RBP27.1■■□□□ 1.93
C4A-253ENST00000477424 THEMISQ8N1K5 641 aaPredicted RBP27.1■■□□□ 1.93
C4A-253ENST00000477424 MYO5BQ9ULV0 1848 aa27.09■■□□□ 1.93
C4A-253ENST00000477424 NUP155O75694 1391 aa27.09■■□□□ 1.93
C4A-253ENST00000477424 HFM1A2PYH4 1435 aa27.08■■□□□ 1.93
C4A-253ENST00000477424 IQGAP1P46940 1657 aa27.08■■□□□ 1.93
C4A-253ENST00000477424 SLIT1O75093 1534 aa27.07■■□□□ 1.92
C4A-253ENST00000477424 ARHGAP23Q9P227 1491 aa27.06■■□□□ 1.92
C4A-253ENST00000477424 ADGRB3O60242 1522 aa27.06■■□□□ 1.92
C4A-253ENST00000477424 MED14O60244 1454 aa27.06■■□□□ 1.92
C4A-253ENST00000477424 CERKQ8TCT0 537 aa27.04■■□□□ 1.92
C4A-253ENST00000477424 IDI1Q13907 227 aa27.03■■□□□ 1.92
C4A-253ENST00000477424 ANKLE2Q86XL3 938 aa27.03■■□□□ 1.92
C4A-253ENST00000477424 NPHP4O75161 1426 aaPredicted RBP27.02■■□□□ 1.92
C4A-253ENST00000477424 ZNF335Q9H4Z2 1342 aaPredicted RBP27.02■■□□□ 1.92
C4A-253ENST00000477424 SPHKAPQ2M3C7 1700 aa27.02■■□□□ 1.92
C4A-253ENST00000477424 SCAF11Q99590 1463 aaKnown RBP27■■□□□ 1.91
C4A-253ENST00000477424 TMEM131LA2VDJ0 1609 aa26.99■■□□□ 1.91
C4A-253ENST00000477424 FBXO41Q8TF61 875 aa26.97■■□□□ 1.91
C4A-253ENST00000477424 TMEM2Q9UHN6 1383 aa26.97■■□□□ 1.91
C4A-253ENST00000477424 LTKP29376 864 aa26.95■■□□□ 1.9
C4A-253ENST00000477424 SLC52A1Q9NWF4 448 aa26.95■■□□□ 1.9
C4A-253ENST00000477424 STRCP1A6NGW2 1772 aa26.94■■□□□ 1.9
C4A-253ENST00000477424 STAG3Q9UJ98 1225 aa26.93■■□□□ 1.9
C4A-253ENST00000477424 TXNDC2Q86VQ3 553 aa26.89■■□□□ 1.9
C4A-253ENST00000477424 IQSEC2Q5JU85 1478 aa26.87■■□□□ 1.89
C4A-253ENST00000477424 CLTCL1P53675 1640 aa26.87■■□□□ 1.89
C4A-253ENST00000477424 ZFYVE9O95405 1425 aa26.87■■□□□ 1.89
C4A-253ENST00000477424 TRPM2O94759 1503 aa26.85■■□□□ 1.89
C4A-253ENST00000477424 CPS1P31327 1500 aa26.85■■□□□ 1.89
C4A-253ENST00000477424 TRIM52Q96A61 297 aa26.84■■□□□ 1.89
C4A-253ENST00000477424 EID1Q9Y6B2 187 aa26.84■■□□□ 1.89
C4A-253ENST00000477424 RIMS2Q9UQ26 1411 aa26.82■■□□□ 1.88
C4A-253ENST00000477424 CHGAP10645 457 aaKnown RBP26.79■■□□□ 1.88
C4A-253ENST00000477424 KIF1BO60333 1816 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms