RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-208ENST00000477234 FYCO1Q9BQS8 1478 aa19.99■□□□□ 0.79
SBF1-208ENST00000477234 CCNB3Q8WWL7 1395 aa19.97■□□□□ 0.79
SBF1-208ENST00000477234 NLRP1Q9C000 1473 aa19.96■□□□□ 0.79
SBF1-208ENST00000477234 NEURL4Q96JN8 1562 aa19.95■□□□□ 0.78
SBF1-208ENST00000477234 DEPDC5O75140 1603 aa19.95■□□□□ 0.78
SBF1-208ENST00000477234 RTEL1-TNFRSF6BF6WH68 1400 aa19.95■□□□□ 0.78
SBF1-208ENST00000477234 MED14O60244 1454 aa19.95■□□□□ 0.78
SBF1-208ENST00000477234 EHMT2Q96KQ7 1210 aa19.95■□□□□ 0.78
SBF1-208ENST00000477234 PZPP20742 1482 aa19.94■□□□□ 0.78
SBF1-208ENST00000477234 DHX29Q7Z478 1369 aaKnown RBP19.94■□□□□ 0.78
SBF1-208ENST00000477234 NPHP4O75161 1426 aaPredicted RBP19.93■□□□□ 0.78
SBF1-208ENST00000477234 VWDEQ8N2E2 1590 aa19.92■□□□□ 0.78
SBF1-208ENST00000477234 WASHC2CQ9Y4E1 1318 aa19.91■□□□□ 0.78
SBF1-208ENST00000477234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.91■□□□□ 0.78
SBF1-208ENST00000477234 KDM5DQ9BY66 1539 aa19.91■□□□□ 0.78
SBF1-208ENST00000477234 UGGT1Q9NYU2 1555 aa19.91■□□□□ 0.78
SBF1-208ENST00000477234 RSPH4AQ5TD94 716 aa19.9■□□□□ 0.78
SBF1-208ENST00000477234 MIA2Q96PC5 1412 aa19.9■□□□□ 0.78
SBF1-208ENST00000477234 SYNMO15061 1565 aa19.89■□□□□ 0.77
SBF1-208ENST00000477234 RNF17Q9BXT8 1623 aaKnown RBP19.89■□□□□ 0.77
SBF1-208ENST00000477234 KIF3BO15066 747 aa19.88■□□□□ 0.77
SBF1-208ENST00000477234 IQGAP1P46940 1657 aa19.87■□□□□ 0.77
SBF1-208ENST00000477234 MTUS2Q5JR59 1369 aa19.86■□□□□ 0.77
SBF1-208ENST00000477234 FBXO31Q5XUX0 539 aaPredicted RBP19.86■□□□□ 0.77
SBF1-208ENST00000477234 ALKQ9UM73 1620 aa19.84■□□□□ 0.77
SBF1-208ENST00000477234 LRRC7Q96NW7 1537 aa19.83■□□□□ 0.77
SBF1-208ENST00000477234 MBD5Q9P267 1494 aa19.8■□□□□ 0.76
SBF1-208ENST00000477234 SENP3Q9H4L4 574 aaPredicted RBP19.77■□□□□ 0.76
SBF1-208ENST00000477234 RGS17Q9UGC6 210 aaPredicted RBP19.77■□□□□ 0.76
SBF1-208ENST00000477234 CCDC141Q6ZP82 1450 aa19.76■□□□□ 0.75
SBF1-208ENST00000477234 TSPY4P0CV99 314 aa19.75■□□□□ 0.75
SBF1-208ENST00000477234 TSPY10P0CW01 314 aa19.75■□□□□ 0.75
SBF1-208ENST00000477234 FAM135BQ49AJ0 1406 aa19.75■□□□□ 0.75
SBF1-208ENST00000477234 ZNF644Q9H582 1327 aaPredicted RBP19.74■□□□□ 0.75
SBF1-208ENST00000477234 ZC3H13Q5T200 1668 aaKnown RBP19.73■□□□□ 0.75
SBF1-208ENST00000477234 TIAM1Q13009 1591 aa19.73■□□□□ 0.75
SBF1-208ENST00000477234 STRCP1A6NGW2 1772 aa19.72■□□□□ 0.75
SBF1-208ENST00000477234 EHBP1L1Q8N3D4 1523 aa19.71■□□□□ 0.75
SBF1-208ENST00000477234 CEP162Q5TB80 1403 aa19.71■□□□□ 0.75
SBF1-208ENST00000477234 EID1Q9Y6B2 187 aa19.71■□□□□ 0.75
SBF1-208ENST00000477234 SCAF11Q99590 1463 aaKnown RBP19.71■□□□□ 0.75
SBF1-208ENST00000477234 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
SBF1-208ENST00000477234 TXNDC2Q86VQ3 553 aa19.67■□□□□ 0.74
SBF1-208ENST00000477234 POTEAQ6S8J7 498 aa19.66■□□□□ 0.74
SBF1-208ENST00000477234 ERVK-7P63135 1459 aa19.65■□□□□ 0.74
SBF1-208ENST00000477234 LRRC9Q6ZRR7 1453 aa19.64■□□□□ 0.73
SBF1-208ENST00000477234 UBR1Q8IWV7 1749 aa19.63■□□□□ 0.73
SBF1-208ENST00000477234 ARHGEF5Q12774 1597 aa19.63■□□□□ 0.73
SBF1-208ENST00000477234 ABCC3O15438 1527 aa19.63■□□□□ 0.73
SBF1-208ENST00000477234 SLIT1O75093 1534 aa19.63■□□□□ 0.73
SBF1-208ENST00000477234 CAMSAP2Q08AD1 1489 aa19.63■□□□□ 0.73
SBF1-208ENST00000477234 EIF2AK4Q9P2K8 1649 aaKnown RBP19.62■□□□□ 0.73
SBF1-208ENST00000477234 ARHGAP23Q9P227 1491 aa19.6■□□□□ 0.73
SBF1-208ENST00000477234 XIRP1Q702N8 1843 aaKnown RBP19.59■□□□□ 0.73
SBF1-208ENST00000477234 KCNA6P17658 529 aa19.58■□□□□ 0.72
SBF1-208ENST00000477234 STAG3Q9UJ98 1225 aa19.58■□□□□ 0.72
SBF1-208ENST00000477234 CFAP65Q6ZU64 1925 aaKnown RBP19.58■□□□□ 0.72
SBF1-208ENST00000477234 LTKP29376 864 aa19.57■□□□□ 0.72
SBF1-208ENST00000477234 TMEM94Q12767 1356 aa19.57■□□□□ 0.72
SBF1-208ENST00000477234 JCADQ9P266 1359 aa19.57■□□□□ 0.72
SBF1-208ENST00000477234 ROBO1Q9Y6N7 1651 aa19.56■□□□□ 0.72
SBF1-208ENST00000477234 ARHGAP31Q2M1Z3 1444 aa19.55■□□□□ 0.72
SBF1-208ENST00000477234 ZNF772Q68DY9 489 aaPredicted RBP19.55■□□□□ 0.72
SBF1-208ENST00000477234 PROSER2Q86WR7 435 aaPredicted RBP19.55■□□□□ 0.72
SBF1-208ENST00000477234 NCOA2Q15596 1464 aa19.54■□□□□ 0.72
SBF1-208ENST00000477234 MAST1Q9Y2H9 1570 aa19.53■□□□□ 0.72
SBF1-208ENST00000477234 MSH6P52701 1360 aa19.53■□□□□ 0.72
SBF1-208ENST00000477234 TMEM2Q9UHN6 1383 aa19.53■□□□□ 0.72
SBF1-208ENST00000477234 KDM5AP29375 1690 aaKnown RBP19.52■□□□□ 0.71
SBF1-208ENST00000477234 NKTRP30414 1462 aaKnown RBP19.51■□□□□ 0.71
SBF1-208ENST00000477234 SPATA31A6Q5VVP1 1343 aa19.51■□□□□ 0.71
SBF1-208ENST00000477234 CEP152O94986 1710 aa19.49■□□□□ 0.71
SBF1-208ENST00000477234 SLAIN2Q9P270 581 aa19.49■□□□□ 0.71
SBF1-208ENST00000477234 PHLPP1O60346 1717 aa19.48■□□□□ 0.71
SBF1-208ENST00000477234 PRDM15P57071 1507 aaPredicted RBP19.48■□□□□ 0.71
SBF1-208ENST00000477234 DUOX2Q9NRD8 1548 aa19.48■□□□□ 0.71
SBF1-208ENST00000477234 UPF1Q92900 1129 aaKnown RBP eCLIP19.48■□□□□ 0.71
SBF1-208ENST00000477234 KANK1Q14678 1352 aa19.47■□□□□ 0.71
SBF1-208ENST00000477234 MEX3CQ5U5Q3 659 aaKnown RBP19.47■□□□□ 0.71
SBF1-208ENST00000477234 FGD6Q6ZV73 1430 aa19.47■□□□□ 0.71
SBF1-208ENST00000477234 SETD1AO15047 1707 aaKnown RBP19.46■□□□□ 0.71
SBF1-208ENST00000477234 EFCAB6Q5THR3 1501 aa19.46■□□□□ 0.71
SBF1-208ENST00000477234 MROH1Q8NDA8 1641 aa19.45■□□□□ 0.7
SBF1-208ENST00000477234 HDGFP51858 240 aaKnown RBP19.45■□□□□ 0.7
SBF1-208ENST00000477234 MAP3K1Q13233 1512 aa19.44■□□□□ 0.7
SBF1-208ENST00000477234 FOXD1Q16676 465 aa19.43■□□□□ 0.7
SBF1-208ENST00000477234 PIK3C2BO00750 1634 aa19.43■□□□□ 0.7
SBF1-208ENST00000477234 ERBINQ96RT1 1412 aa19.42■□□□□ 0.7
SBF1-208ENST00000477234 NCOA3Q9Y6Q9 1424 aa19.42■□□□□ 0.7
SBF1-208ENST00000477234 RXRBP28702 533 aa19.41■□□□□ 0.7
SBF1-208ENST00000477234 BCANQ96GW7 911 aa19.41■□□□□ 0.7
SBF1-208ENST00000477234 MYOM3Q5VTT5 1437 aa19.41■□□□□ 0.7
SBF1-208ENST00000477234 NWD1Q149M9 1564 aa19.4■□□□□ 0.7
SBF1-208ENST00000477234 TET3O43151 1660 aa19.4■□□□□ 0.7
SBF1-208ENST00000477234 SLC26A8Q96RN1 970 aa19.4■□□□□ 0.7
SBF1-208ENST00000477234 CDK12Q9NYV4 1490 aaPredicted RBP19.4■□□□□ 0.7
SBF1-208ENST00000477234 SLC52A1Q9NWF4 448 aa19.39■□□□□ 0.69
SBF1-208ENST00000477234 TRIM52Q96A61 297 aa19.38■□□□□ 0.69
SBF1-208ENST00000477234 IDI1Q13907 227 aa19.37■□□□□ 0.69
SBF1-208ENST00000477234 KIF15Q9NS87 1388 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms