RNA–Protein interactions for RNA: ENST00000476988.2

ITGB5-206, Transcript of integrin subunit beta 5, humanhuman

TSL 4

Gene ITGB5, Length 492 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-206ENST00000476988 DHX29Q7Z478 1369 aaKnown RBP16.25■□□□□ 0.19
ITGB5-206ENST00000476988 EHBP1L1Q8N3D4 1523 aa16.24■□□□□ 0.19
ITGB5-206ENST00000476988 PTPRKQ15262 1439 aa16.23■□□□□ 0.19
ITGB5-206ENST00000476988 TOM1O60784 492 aa16.23■□□□□ 0.19
ITGB5-206ENST00000476988 THEMISQ8N1K5 641 aaPredicted RBP16.23■□□□□ 0.19
ITGB5-206ENST00000476988 ZNF335Q9H4Z2 1342 aaPredicted RBP16.22■□□□□ 0.19
ITGB5-206ENST00000476988 CEP162Q5TB80 1403 aa16.22■□□□□ 0.19
ITGB5-206ENST00000476988 ANKLE2Q86XL3 938 aa16.22■□□□□ 0.19
ITGB5-206ENST00000476988 INO80Q9ULG1 1556 aaPredicted RBP16.21■□□□□ 0.19
ITGB5-206ENST00000476988 CLTCQ00610 1675 aaKnown RBP16.21■□□□□ 0.19
ITGB5-206ENST00000476988 ADGBQ8N7X0 1667 aa16.21■□□□□ 0.19
ITGB5-206ENST00000476988 LTBP4Q8N2S1 1624 aa16.21■□□□□ 0.19
ITGB5-206ENST00000476988 ZNF644Q9H582 1327 aaPredicted RBP16.2■□□□□ 0.18
ITGB5-206ENST00000476988 PLXNC1O60486 1568 aa16.2■□□□□ 0.18
ITGB5-206ENST00000476988 CEP170BQ9Y4F5 1589 aaPredicted RBP16.2■□□□□ 0.18
ITGB5-206ENST00000476988 A2ML1A8K2U0 1454 aa16.19■□□□□ 0.18
ITGB5-206ENST00000476988 TNRQ92752 1358 aa16.18■□□□□ 0.18
ITGB5-206ENST00000476988 CCDC141Q6ZP82 1450 aa16.17■□□□□ 0.18
ITGB5-206ENST00000476988 MYO3AQ8NEV4 1616 aa16.17■□□□□ 0.18
ITGB5-206ENST00000476988 FAM135AQ9P2D6 1515 aa16.17■□□□□ 0.18
ITGB5-206ENST00000476988 SPATA31D1Q6ZQQ2 1576 aa16.17■□□□□ 0.18
ITGB5-206ENST00000476988 TCOF1Q13428 1488 aaKnown RBP16.16■□□□□ 0.18
ITGB5-206ENST00000476988 MBD5Q9P267 1494 aa16.16■□□□□ 0.18
ITGB5-206ENST00000476988 ZNF142P52746 1687 aaPredicted RBP16.15■□□□□ 0.18
ITGB5-206ENST00000476988 TIAM1Q13009 1591 aa16.15■□□□□ 0.18
ITGB5-206ENST00000476988 ILDR2Q71H61 639 aa16.15■□□□□ 0.18
ITGB5-206ENST00000476988 KDM5DQ9BY66 1539 aa16.14■□□□□ 0.17
ITGB5-206ENST00000476988 PIP4K2BP78356 416 aa16.13■□□□□ 0.17
ITGB5-206ENST00000476988 PZPP20742 1482 aa16.12■□□□□ 0.17
ITGB5-206ENST00000476988 APLP2Q06481 763 aa16.12■□□□□ 0.17
ITGB5-206ENST00000476988 FBXO31Q5XUX0 539 aaPredicted RBP16.12■□□□□ 0.17
ITGB5-206ENST00000476988 CPS1P31327 1500 aa16.12■□□□□ 0.17
ITGB5-206ENST00000476988 MIA2Q96PC5 1412 aa16.11■□□□□ 0.17
ITGB5-206ENST00000476988 CAMSAP2Q08AD1 1489 aa16.11■□□□□ 0.17
ITGB5-206ENST00000476988 NCOA2Q15596 1464 aa16.11■□□□□ 0.17
ITGB5-206ENST00000476988 NLRP1Q9C000 1473 aa16.11■□□□□ 0.17
ITGB5-206ENST00000476988 DNMT1P26358 1616 aaKnown RBP16.08■□□□□ 0.17
ITGB5-206ENST00000476988 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.16
ITGB5-206ENST00000476988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.08■□□□□ 0.16
ITGB5-206ENST00000476988 SHANK2Q9UPX8 1470 aa16.07■□□□□ 0.16
ITGB5-206ENST00000476988 UGGT1Q9NYU2 1555 aa16.06■□□□□ 0.16
ITGB5-206ENST00000476988 EID1Q9Y6B2 187 aa16.05■□□□□ 0.16
ITGB5-206ENST00000476988 ARHGEF5Q12774 1597 aa16.04■□□□□ 0.16
ITGB5-206ENST00000476988 NPHP4O75161 1426 aaPredicted RBP16.04■□□□□ 0.16
ITGB5-206ENST00000476988 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
ITGB5-206ENST00000476988 HSPA1LP34931 641 aa16.03■□□□□ 0.16
ITGB5-206ENST00000476988 SLC4A1APQ9BWU0 796 aaKnown RBP16.03■□□□□ 0.16
ITGB5-206ENST00000476988 VPS8Q8N3P4 1428 aa16.02■□□□□ 0.15
ITGB5-206ENST00000476988 MYOM3Q5VTT5 1437 aa16.01■□□□□ 0.15
ITGB5-206ENST00000476988 KANK1Q14678 1352 aa16■□□□□ 0.15
ITGB5-206ENST00000476988 POLR1AO95602 1720 aaPredicted RBP16■□□□□ 0.15
ITGB5-206ENST00000476988 LRRC9Q6ZRR7 1453 aa16■□□□□ 0.15
ITGB5-206ENST00000476988 RNF39Q9H2S5 420 aa16■□□□□ 0.15
ITGB5-206ENST00000476988 MED14O60244 1454 aa15.99■□□□□ 0.15
ITGB5-206ENST00000476988 DEPDC5O75140 1603 aa15.97■□□□□ 0.15
ITGB5-206ENST00000476988 TXNDC2Q86VQ3 553 aa15.97■□□□□ 0.15
ITGB5-206ENST00000476988 ZC3H13Q5T200 1668 aaKnown RBP15.97■□□□□ 0.15
ITGB5-206ENST00000476988 MAP3K1Q13233 1512 aa15.96■□□□□ 0.15
ITGB5-206ENST00000476988 MAST1Q9Y2H9 1570 aa15.95■□□□□ 0.14
ITGB5-206ENST00000476988 DUOX2Q9NRD8 1548 aa15.94■□□□□ 0.14
ITGB5-206ENST00000476988 EIF2AK4Q9P2K8 1649 aaKnown RBP15.94■□□□□ 0.14
ITGB5-206ENST00000476988 RRP7BPQ9NSQ0 103 aa15.94■□□□□ 0.14
ITGB5-206ENST00000476988 NEURL4Q96JN8 1562 aa15.94■□□□□ 0.14
ITGB5-206ENST00000476988 ABCC3O15438 1527 aa15.94■□□□□ 0.14
ITGB5-206ENST00000476988 ERVK-7P63135 1459 aa15.92■□□□□ 0.14
ITGB5-206ENST00000476988 KIF15Q9NS87 1388 aa15.92■□□□□ 0.14
ITGB5-206ENST00000476988 HDGFP51858 240 aaKnown RBP15.92■□□□□ 0.14
ITGB5-206ENST00000476988 RNF17Q9BXT8 1623 aaKnown RBP15.92■□□□□ 0.14
ITGB5-206ENST00000476988 IQGAP1P46940 1657 aa15.92■□□□□ 0.14
ITGB5-206ENST00000476988 BCANQ96GW7 911 aa15.91■□□□□ 0.14
ITGB5-206ENST00000476988 ERBINQ96RT1 1412 aa15.91■□□□□ 0.14
ITGB5-206ENST00000476988 SCAF11Q99590 1463 aaKnown RBP15.91■□□□□ 0.14
ITGB5-206ENST00000476988 LOC105371045A0A1W2PR82 267 aa15.9■□□□□ 0.14
ITGB5-206ENST00000476988 KANK4Q5T7N3 995 aaPredicted RBP15.9■□□□□ 0.14
ITGB5-206ENST00000476988 ARHGAP31Q2M1Z3 1444 aa15.9■□□□□ 0.14
ITGB5-206ENST00000476988 VWDEQ8N2E2 1590 aa15.9■□□□□ 0.14
ITGB5-206ENST00000476988 ANKRD30AQ9BXX3 1397 aa15.89■□□□□ 0.13
ITGB5-206ENST00000476988 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
ITGB5-206ENST00000476988 MED1Q15648 1581 aaPredicted RBP15.87■□□□□ 0.13
ITGB5-206ENST00000476988 SYNMO15061 1565 aa15.87■□□□□ 0.13
ITGB5-206ENST00000476988 LRRC7Q96NW7 1537 aa15.86■□□□□ 0.13
ITGB5-206ENST00000476988 SLC52A1Q9NWF4 448 aa15.85■□□□□ 0.13
ITGB5-206ENST00000476988 LTKP29376 864 aa15.84■□□□□ 0.13
ITGB5-206ENST00000476988 TMEM2Q9UHN6 1383 aa15.84■□□□□ 0.13
ITGB5-206ENST00000476988 PROSER2Q86WR7 435 aaPredicted RBP15.83■□□□□ 0.12
ITGB5-206ENST00000476988 CHIC2Q9UKJ5 165 aa15.83■□□□□ 0.12
ITGB5-206ENST00000476988 SLIT1O75093 1534 aa15.83■□□□□ 0.12
ITGB5-206ENST00000476988 KCNA6P17658 529 aa15.82■□□□□ 0.12
ITGB5-206ENST00000476988 ABCC5O15440 1437 aa15.82■□□□□ 0.12
ITGB5-206ENST00000476988 PPP1R15AO75807 674 aaPredicted RBP15.81■□□□□ 0.12
ITGB5-206ENST00000476988 DAPK1P53355 1430 aa15.81■□□□□ 0.12
ITGB5-206ENST00000476988 PRDM15P57071 1507 aaPredicted RBP15.81■□□□□ 0.12
ITGB5-206ENST00000476988 C1QBPQ07021 282 aaKnown RBP15.81■□□□□ 0.12
ITGB5-206ENST00000476988 ARHGAP23Q9P227 1491 aa15.8■□□□□ 0.12
ITGB5-206ENST00000476988 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
ITGB5-206ENST00000476988 IDI1Q13907 227 aa15.8■□□□□ 0.12
ITGB5-206ENST00000476988 UBR1Q8IWV7 1749 aa15.8■□□□□ 0.12
ITGB5-206ENST00000476988 CEP152O94986 1710 aa15.79■□□□□ 0.12
ITGB5-206ENST00000476988 PTPN23Q9H3S7 1636 aa15.79■□□□□ 0.12
ITGB5-206ENST00000476988 FGD6Q6ZV73 1430 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms