RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 TNRQ92752 1358 aa25.51■■□□□ 1.67
SMG5-204ENST00000476954 ADGBQ8N7X0 1667 aa25.51■■□□□ 1.67
SMG5-204ENST00000476954 CASKIN1Q8WXD9 1431 aa25.5■■□□□ 1.67
SMG5-204ENST00000476954 ANKLE2Q86XL3 938 aa25.47■■□□□ 1.67
SMG5-204ENST00000476954 NPHP4O75161 1426 aaPredicted RBP25.46■■□□□ 1.67
SMG5-204ENST00000476954 KIAA1107Q9UPP5 1409 aa25.46■■□□□ 1.67
SMG5-204ENST00000476954 LRRC7Q96NW7 1537 aa25.46■■□□□ 1.67
SMG5-204ENST00000476954 RNF17Q9BXT8 1623 aaKnown RBP25.44■■□□□ 1.66
SMG5-204ENST00000476954 MED14O60244 1454 aa25.43■■□□□ 1.66
SMG5-204ENST00000476954 IQGAP1P46940 1657 aa25.42■■□□□ 1.66
SMG5-204ENST00000476954 DEPDC5O75140 1603 aa25.42■■□□□ 1.66
SMG5-204ENST00000476954 PLEKHH2Q8IVE3 1493 aa25.41■■□□□ 1.66
SMG5-204ENST00000476954 CFDP1Q9UEE9 299 aaPredicted RBP25.41■■□□□ 1.66
SMG5-204ENST00000476954 PZPP20742 1482 aa25.4■■□□□ 1.66
SMG5-204ENST00000476954 POTEAQ6S8J7 498 aa25.4■■□□□ 1.66
SMG5-204ENST00000476954 THEMISQ8N1K5 641 aaPredicted RBP25.38■■□□□ 1.65
SMG5-204ENST00000476954 UGGT1Q9NYU2 1555 aa25.38■■□□□ 1.65
SMG5-204ENST00000476954 ZNF644Q9H582 1327 aaPredicted RBP25.37■■□□□ 1.65
SMG5-204ENST00000476954 SYNMO15061 1565 aa25.36■■□□□ 1.65
SMG5-204ENST00000476954 MIA2Q96PC5 1412 aa25.35■■□□□ 1.65
SMG5-204ENST00000476954 SETD1AO15047 1707 aaKnown RBP25.34■■□□□ 1.65
SMG5-204ENST00000476954 KDM5DQ9BY66 1539 aa25.34■■□□□ 1.65
SMG5-204ENST00000476954 DHX29Q7Z478 1369 aaKnown RBP25.33■■□□□ 1.65
SMG5-204ENST00000476954 CCNB3Q8WWL7 1395 aa25.33■■□□□ 1.65
SMG5-204ENST00000476954 FAM135AQ9P2D6 1515 aa25.33■■□□□ 1.65
SMG5-204ENST00000476954 KIF3BO15066 747 aa25.33■■□□□ 1.65
SMG5-204ENST00000476954 FYCO1Q9BQS8 1478 aa25.32■■□□□ 1.64
SMG5-204ENST00000476954 NLRP1Q9C000 1473 aa25.32■■□□□ 1.64
SMG5-204ENST00000476954 XIRP1Q702N8 1843 aaKnown RBP25.31■■□□□ 1.64
SMG5-204ENST00000476954 MBD5Q9P267 1494 aa25.3■■□□□ 1.64
SMG5-204ENST00000476954 ZC3H13Q5T200 1668 aaKnown RBP25.29■■□□□ 1.64
SMG5-204ENST00000476954 WASHC2CQ9Y4E1 1318 aa25.28■■□□□ 1.64
SMG5-204ENST00000476954 RTEL1-TNFRSF6BF6WH68 1400 aa25.25■■□□□ 1.63
SMG5-204ENST00000476954 TIAM1Q13009 1591 aa25.23■■□□□ 1.63
SMG5-204ENST00000476954 UBR1Q8IWV7 1749 aa25.15■■□□□ 1.62
SMG5-204ENST00000476954 FAM135BQ49AJ0 1406 aa25.15■■□□□ 1.62
SMG5-204ENST00000476954 CHIC1Q5VXU3 224 aa25.15■■□□□ 1.62
SMG5-204ENST00000476954 CFAP65Q6ZU64 1925 aaKnown RBP25.15■■□□□ 1.62
SMG5-204ENST00000476954 MTUS2Q5JR59 1369 aa25.15■■□□□ 1.62
SMG5-204ENST00000476954 ROBO1Q9Y6N7 1651 aa25.13■■□□□ 1.61
SMG5-204ENST00000476954 LTKP29376 864 aa25.12■■□□□ 1.61
SMG5-204ENST00000476954 SCAF11Q99590 1463 aaKnown RBP25.12■■□□□ 1.61
SMG5-204ENST00000476954 ERVK-7P63135 1459 aa25.11■■□□□ 1.61
SMG5-204ENST00000476954 CCDC141Q6ZP82 1450 aa25.11■■□□□ 1.61
SMG5-204ENST00000476954 ABCC3O15438 1527 aa25.11■■□□□ 1.61
SMG5-204ENST00000476954 NCOA2Q15596 1464 aa25.1■■□□□ 1.61
SMG5-204ENST00000476954 CAMSAP2Q08AD1 1489 aa25.05■■□□□ 1.6
SMG5-204ENST00000476954 ARHGAP23Q9P227 1491 aa25.05■■□□□ 1.6
SMG5-204ENST00000476954 TXNDC2Q86VQ3 553 aa25.05■■□□□ 1.6
SMG5-204ENST00000476954 TMEM94Q12767 1356 aa25.05■■□□□ 1.6
SMG5-204ENST00000476954 UPF1Q92900 1129 aaKnown RBP eCLIP25.04■■□□□ 1.63e-10■■■■□ 22.4
SMG5-204ENST00000476954 RBM33Q96EV2 1170 aaKnown RBP25.04■■□□□ 1.6
SMG5-204ENST00000476954 CEP152O94986 1710 aa25.03■■□□□ 1.6
SMG5-204ENST00000476954 SLIT1O75093 1534 aa25.02■■□□□ 1.6
SMG5-204ENST00000476954 EHBP1L1Q8N3D4 1523 aa25.02■■□□□ 1.6
SMG5-204ENST00000476954 MAP3K1Q13233 1512 aa25.01■■□□□ 1.59
SMG5-204ENST00000476954 MROH1Q8NDA8 1641 aa25■■□□□ 1.59
SMG5-204ENST00000476954 PHLPP1O60346 1717 aa24.98■■□□□ 1.59
SMG5-204ENST00000476954 CEP162Q5TB80 1403 aa24.98■■□□□ 1.59
SMG5-204ENST00000476954 TRIM52Q96A61 297 aa24.95■■□□□ 1.58
SMG5-204ENST00000476954 ARHGEF5Q12774 1597 aa24.94■■□□□ 1.58
SMG5-204ENST00000476954 PROSER2Q86WR7 435 aaPredicted RBP24.93■■□□□ 1.58
SMG5-204ENST00000476954 PIK3C2BO00750 1634 aa24.93■■□□□ 1.58
SMG5-204ENST00000476954 RSPH4AQ5TD94 716 aa24.92■■□□□ 1.58
SMG5-204ENST00000476954 EID1Q9Y6B2 187 aa24.92■■□□□ 1.58
SMG5-204ENST00000476954 LRP6O75581 1613 aa24.92■■□□□ 1.58
SMG5-204ENST00000476954 JCADQ9P266 1359 aa24.92■■□□□ 1.58
SMG5-204ENST00000476954 LRRC9Q6ZRR7 1453 aa24.91■■□□□ 1.58
SMG5-204ENST00000476954 EIF2AK4Q9P2K8 1649 aaKnown RBP24.9■■□□□ 1.58
SMG5-204ENST00000476954 KCNA6P17658 529 aa24.9■■□□□ 1.58
SMG5-204ENST00000476954 TSPY4P0CV99 314 aa24.89■■□□□ 1.58
SMG5-204ENST00000476954 TSPY10P0CW01 314 aa24.89■■□□□ 1.58
SMG5-204ENST00000476954 COL16A1Q07092 1604 aaPredicted RBP24.88■■□□□ 1.57
SMG5-204ENST00000476954 SLC26A8Q96RN1 970 aa24.88■■□□□ 1.57
SMG5-204ENST00000476954 TMEM2Q9UHN6 1383 aa24.88■■□□□ 1.57
SMG5-204ENST00000476954 PRDM15P57071 1507 aaPredicted RBP24.86■■□□□ 1.57
SMG5-204ENST00000476954 TET3O43151 1660 aa24.85■■□□□ 1.57
SMG5-204ENST00000476954 SLAIN2Q9P270 581 aa24.84■■□□□ 1.57
SMG5-204ENST00000476954 MAST1Q9Y2H9 1570 aa24.84■■□□□ 1.57
SMG5-204ENST00000476954 NWD1Q149M9 1564 aa24.82■■□□□ 1.56
SMG5-204ENST00000476954 MSH6P52701 1360 aa24.81■■□□□ 1.56
SMG5-204ENST00000476954 MEX3CQ5U5Q3 659 aaKnown RBP24.81■■□□□ 1.56
SMG5-204ENST00000476954 ZNF772Q68DY9 489 aaPredicted RBP24.8■■□□□ 1.56
SMG5-204ENST00000476954 NKTRP30414 1462 aaKnown RBP24.79■■□□□ 1.56
SMG5-204ENST00000476954 ARHGAP31Q2M1Z3 1444 aa24.78■■□□□ 1.56
SMG5-204ENST00000476954 EFCAB6Q5THR3 1501 aa24.78■■□□□ 1.56
SMG5-204ENST00000476954 STAG3Q9UJ98 1225 aa24.78■■□□□ 1.56
SMG5-204ENST00000476954 SPATA31A6Q5VVP1 1343 aa24.75■■□□□ 1.55
SMG5-204ENST00000476954 RXRBP28702 533 aa24.74■■□□□ 1.55
SMG5-204ENST00000476954 KDM5AP29375 1690 aaKnown RBP24.74■■□□□ 1.55
SMG5-204ENST00000476954 IDI1Q13907 227 aa24.73■■□□□ 1.55
SMG5-204ENST00000476954 SHPRHQ149N8 1683 aa24.72■■□□□ 1.55
SMG5-204ENST00000476954 DUOX2Q9NRD8 1548 aa24.71■■□□□ 1.55
SMG5-204ENST00000476954 FGD6Q6ZV73 1430 aa24.71■■□□□ 1.55
SMG5-204ENST00000476954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.7■■□□□ 1.542e-6■□□□□ 9
SMG5-204ENST00000476954 CHD2O14647 1828 aaKnown RBP24.7■■□□□ 1.54
SMG5-204ENST00000476954 BCANQ96GW7 911 aa24.68■■□□□ 1.54
SMG5-204ENST00000476954 CDK12Q9NYV4 1490 aaPredicted RBP24.68■■□□□ 1.54
SMG5-204ENST00000476954 AHDC1Q5TGY3 1603 aaPredicted RBP24.67■■□□□ 1.54
SMG5-204ENST00000476954 SRCAPQ6ZRS2 3230 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms