RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 FAM163AQ96GL9 167 aaPredicted RBP8.33□□□□□ -1.08
SPTLC3-205ENST00000476791 PLCD4Q9BRC7 762 aa8.33□□□□□ -1.08
SPTLC3-205ENST00000476791 DNAJC5Q9H3Z4 198 aa8.33□□□□□ -1.08
SPTLC3-205ENST00000476791 TSHZ2Q9NRE2 1034 aa8.32□□□□□ -1.08
SPTLC3-205ENST00000476791 MTMR7Q9Y216 660 aa8.31□□□□□ -1.08
SPTLC3-205ENST00000476791 TMEM92Q6UXU6 159 aa8.3□□□□□ -1.08
SPTLC3-205ENST00000476791 GRIPAP1Q4V328 841 aa8.3□□□□□ -1.08
SPTLC3-205ENST00000476791 RBM25P49756 843 aaKnown RBP8.29□□□□□ -1.08
SPTLC3-205ENST00000476791 RGS22Q8NE09 1264 aa8.29□□□□□ -1.08
SPTLC3-205ENST00000476791 RAD21O60216 631 aa8.29□□□□□ -1.08
SPTLC3-205ENST00000476791 CC2D2BQ6DHV5 1058 aa8.28□□□□□ -1.08
SPTLC3-205ENST00000476791 ARID4BQ4LE39 1312 aaPredicted RBP8.27□□□□□ -1.08
SPTLC3-205ENST00000476791 ARID3CA6NKF2 412 aa8.27□□□□□ -1.09
SPTLC3-205ENST00000476791 GTPBP6O43824 516 aaPredicted RBP8.27□□□□□ -1.09
SPTLC3-205ENST00000476791 KDM4AO75164 1064 aa8.27□□□□□ -1.09
SPTLC3-205ENST00000476791 NBR1Q14596 966 aa8.27□□□□□ -1.09
SPTLC3-205ENST00000476791 IL27Q8NEV9 243 aa8.27□□□□□ -1.09
SPTLC3-205ENST00000476791 KCTD17Q8N5Z5 321 aa8.26□□□□□ -1.09
SPTLC3-205ENST00000476791 LCE2DQ5TA82 110 aaPredicted RBP8.26□□□□□ -1.09
SPTLC3-205ENST00000476791 RYDENQ9NUL5 291 aaKnown RBP8.26□□□□□ -1.09
SPTLC3-205ENST00000476791 USP35Q9P2H5 1018 aa8.26□□□□□ -1.09
SPTLC3-205ENST00000476791 PPM1GO15355 546 aaPredicted RBP8.25□□□□□ -1.09
SPTLC3-205ENST00000476791 CCDC27Q2M243 656 aa8.25□□□□□ -1.09
SPTLC3-205ENST00000476791 STAC3Q96MF2 364 aa8.25□□□□□ -1.09
SPTLC3-205ENST00000476791 SNPHO15079 494 aa8.24□□□□□ -1.09
SPTLC3-205ENST00000476791 ST18O60284 1047 aa8.23□□□□□ -1.09
SPTLC3-205ENST00000476791 C2orf72A6NCS6 295 aa8.22□□□□□ -1.09
SPTLC3-205ENST00000476791 BRPF1P55201 1214 aaPredicted RBP8.22□□□□□ -1.09
SPTLC3-205ENST00000476791 OS9Q13438 667 aaPredicted RBP8.22□□□□□ -1.09
SPTLC3-205ENST00000476791 ANAPC15P60006 121 aa8.22□□□□□ -1.09
SPTLC3-205ENST00000476791 TMC2Q8TDI7 906 aa8.21□□□□□ -1.1
SPTLC3-205ENST00000476791 POTEMA6NI47 508 aa8.2□□□□□ -1.1
SPTLC3-205ENST00000476791 PATL2C9JE40 543 aaKnown RBP8.2□□□□□ -1.1
SPTLC3-205ENST00000476791 HOXB3P14651 431 aaPredicted RBP8.2□□□□□ -1.1
SPTLC3-205ENST00000476791 FAM193AP78312 1265 aa8.2□□□□□ -1.1
SPTLC3-205ENST00000476791 POTEGQ6S5H5 508 aa8.2□□□□□ -1.1
SPTLC3-205ENST00000476791 KIF3CO14782 793 aa8.19□□□□□ -1.1
SPTLC3-205ENST00000476791 CANXP27824 592 aaKnown RBP8.19□□□□□ -1.1
SPTLC3-205ENST00000476791 ZNF710Q8N1W2 664 aa8.18□□□□□ -1.1
SPTLC3-205ENST00000476791 MARVELD3Q96A59 401 aa8.18□□□□□ -1.1
SPTLC3-205ENST00000476791 FAM50AQ14320 339 aaKnown RBP8.17□□□□□ -1.1
SPTLC3-205ENST00000476791 MCCP23508 829 aa8.17□□□□□ -1.1
SPTLC3-205ENST00000476791 DOK7Q18PE1 504 aa8.17□□□□□ -1.1
SPTLC3-205ENST00000476791 PTMSP20962 102 aa8.16□□□□□ -1.1
SPTLC3-205ENST00000476791 FAM9BQ8IZU0 186 aa8.16□□□□□ -1.1
SPTLC3-205ENST00000476791 GPATCH11Q8N954 259 aa8.16□□□□□ -1.1
SPTLC3-205ENST00000476791 SPRYD3Q8NCJ5 442 aa8.15□□□□□ -1.1
SPTLC3-205ENST00000476791 DNAJC2Q99543 621 aaKnown RBP8.15□□□□□ -1.1
SPTLC3-205ENST00000476791 RIMBP2O15034 1052 aa8.13□□□□□ -1.11
SPTLC3-205ENST00000476791 CDCA8Q53HL2 280 aa8.13□□□□□ -1.11
SPTLC3-205ENST00000476791 SGSM3Q96HU1 749 aa8.13□□□□□ -1.11
SPTLC3-205ENST00000476791 GPHNQ9NQX3 736 aaPredicted RBP8.13□□□□□ -1.11
SPTLC3-205ENST00000476791 MAFGO15525 162 aa8.13□□□□□ -1.11
SPTLC3-205ENST00000476791 SETQ01105 290 aaPredicted RBP8.13□□□□□ -1.11
SPTLC3-205ENST00000476791 PTMAP06454 111 aaKnown RBP8.12□□□□□ -1.11
SPTLC3-205ENST00000476791 EMP3P54852 163 aa8.12□□□□□ -1.11
SPTLC3-205ENST00000476791 DSG2Q14126 1118 aa8.12□□□□□ -1.11
SPTLC3-205ENST00000476791 CADPS2Q86UW7 1296 aa8.12□□□□□ -1.11
SPTLC3-205ENST00000476791 ZNF830Q96NB3 372 aaPredicted RBP8.12□□□□□ -1.11
SPTLC3-205ENST00000476791 NCKAP5LQ9HCH0 1330 aa8.11□□□□□ -1.11
SPTLC3-205ENST00000476791 PRDM4Q9UKN5 801 aa8.11□□□□□ -1.11
SPTLC3-205ENST00000476791 FOXK1P85037 733 aa8.1□□□□□ -1.11
SPTLC3-205ENST00000476791 CNGB1Q14028 1251 aaPredicted RBP8.1□□□□□ -1.11
SPTLC3-205ENST00000476791 PLPP6Q8IY26 295 aa8.1□□□□□ -1.11
SPTLC3-205ENST00000476791 CRISPLD2Q9H0B8 497 aa8.1□□□□□ -1.11
SPTLC3-205ENST00000476791 SLC52A1Q9NWF4 448 aa8.1□□□□□ -1.11
SPTLC3-205ENST00000476791 TMTC2Q8N394 836 aa8.1□□□□□ -1.11
SPTLC3-205ENST00000476791 HOXB1P14653 301 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-205ENST00000476791 ARSIQ5FYB1 569 aa8.09□□□□□ -1.11
SPTLC3-205ENST00000476791 KHSRPQ92945 711 aaKnown RBP eCLIP8.09□□□□□ -1.11
SPTLC3-205ENST00000476791 PDE4AP27815 886 aa8.09□□□□□ -1.11
SPTLC3-205ENST00000476791 FOXD4L6Q3SYB3 417 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-205ENST00000476791 FOXD4L3Q6VB84 417 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-205ENST00000476791 LARP6Q9BRS8 491 aaKnown RBP8.09□□□□□ -1.11
SPTLC3-205ENST00000476791 PLEKHD1A6NEE1 506 aa8.08□□□□□ -1.12
SPTLC3-205ENST00000476791 GPR153Q6NV75 609 aa8.08□□□□□ -1.12
SPTLC3-205ENST00000476791 LAS1LQ9Y4W2 734 aaKnown RBP8.08□□□□□ -1.12
SPTLC3-205ENST00000476791 FAM205CA6NFA0 338 aa8.08□□□□□ -1.12
SPTLC3-205ENST00000476791 CADPSQ9ULU8 1353 aa8.07□□□□□ -1.12
SPTLC3-205ENST00000476791 PPP1R15BQ5SWA1 713 aa8.07□□□□□ -1.12
SPTLC3-205ENST00000476791 ZSWIM6Q9HCJ5 1215 aa8.07□□□□□ -1.12
SPTLC3-205ENST00000476791 NISCHQ9Y2I1 1504 aa8.07□□□□□ -1.12
SPTLC3-205ENST00000476791 NEFMP07197 916 aa8.06□□□□□ -1.12
SPTLC3-205ENST00000476791 LOC102724159A0A0B4J2E5 919 aa8.06□□□□□ -1.12
SPTLC3-205ENST00000476791 BRD1O95696 1058 aa8.06□□□□□ -1.12
SPTLC3-205ENST00000476791 PWP2Q15269 919 aaKnown RBP8.06□□□□□ -1.12
SPTLC3-205ENST00000476791 ZNF316A6NFI3 1004 aaPredicted RBP8.05□□□□□ -1.12
SPTLC3-205ENST00000476791 RTL5Q5HYW3 569 aaPredicted RBP8.05□□□□□ -1.12
SPTLC3-205ENST00000476791 DDX27Q96GQ7 796 aaKnown RBP8.05□□□□□ -1.12
SPTLC3-205ENST00000476791 AEBP1Q8IUX7 1158 aa8.05□□□□□ -1.12
SPTLC3-205ENST00000476791 PCDHGA4Q9Y5G9 962 aa8.05□□□□□ -1.12
SPTLC3-205ENST00000476791 APBB1O00213 710 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 SLC34A2O95436 690 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 NUDT7P0C024 238 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 HS3ST6Q96QI5 342 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 POTEB3A0JP26 581 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 RGS3P49796 1198 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 POTEBQ6S5H4 581 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 CDAN1Q8IWY9 1227 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 ERBB3P21860 1342 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms