RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 DEKP35659 375 aaKnown RBP5.99□□□□□ -1.45
CD55-208ENST00000476590 NUDT7P0C024 238 aa5.98□□□□□ -1.45
CD55-208ENST00000476590 MIER1Q8N108 512 aa5.97□□□□□ -1.45
CD55-208ENST00000476590 SUPT16HQ9Y5B9 1047 aaKnown RBP5.97□□□□□ -1.45
CD55-208ENST00000476590 NUBP1P53384 320 aa5.96□□□□□ -1.46
CD55-208ENST00000476590 PKDCCQ504Y2 493 aa5.96□□□□□ -1.46
CD55-208ENST00000476590 KCNH8Q96L42 1107 aa5.96□□□□□ -1.46
CD55-208ENST00000476590 PSEN2P49810 448 aa5.95□□□□□ -1.46
CD55-208ENST00000476590 GLIPR1L2Q4G1C9 344 aa5.95□□□□□ -1.46
CD55-208ENST00000476590 TMEM92Q6UXU6 159 aa5.94□□□□□ -1.46
CD55-208ENST00000476590 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.94□□□□□ -1.46
CD55-208ENST00000476590 ZBTB47Q9UFB7 747 aaPredicted RBP5.94□□□□□ -1.46
CD55-208ENST00000476590 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
CD55-208ENST00000476590 FGD1P98174 961 aa5.93□□□□□ -1.46
CD55-208ENST00000476590 ZNF467Q7Z7K2 595 aaPredicted RBP5.93□□□□□ -1.46
CD55-208ENST00000476590 NYAP1Q6ZVC0 841 aa5.92□□□□□ -1.46
CD55-208ENST00000476590 PAXIP1Q6ZW49 1069 aaPredicted RBP5.91□□□□□ -1.46
CD55-208ENST00000476590 ZSCAN1Q8NBB4 408 aa5.91□□□□□ -1.46
CD55-208ENST00000476590 YTHDC1Q96MU7 727 aaKnown RBP5.91□□□□□ -1.46
CD55-208ENST00000476590 VPS9D1Q9Y2B5 631 aa5.91□□□□□ -1.46
CD55-208ENST00000476590 CFAP44Q96MT7 982 aa5.9□□□□□ -1.46
CD55-208ENST00000476590 RBM19Q9Y4C8 960 aaKnown RBP5.9□□□□□ -1.46
CD55-208ENST00000476590 PYGBP11216 843 aa5.89□□□□□ -1.47
CD55-208ENST00000476590 TAF7LQ5H9L4 462 aa5.89□□□□□ -1.47
CD55-208ENST00000476590 TRIM41Q8WV44 630 aa5.89□□□□□ -1.47
CD55-208ENST00000476590 KCNMA1Q12791 1236 aa5.88□□□□□ -1.47
CD55-208ENST00000476590 AAMPQ13685 434 aa5.88□□□□□ -1.47
CD55-208ENST00000476590 ZMYND15Q9H091 742 aa5.88□□□□□ -1.47
CD55-208ENST00000476590 BCL11BQ9C0K0 894 aaPredicted RBP5.87□□□□□ -1.47
CD55-208ENST00000476590 FANCIQ9NVI1 1328 aa5.87□□□□□ -1.47
CD55-208ENST00000476590 KRTAP4-12Q9BQ66 201 aa5.87□□□□□ -1.47
CD55-208ENST00000476590 NBR1Q14596 966 aa5.86□□□□□ -1.47
CD55-208ENST00000476590 A0A0U1RQG5 324 aaPredicted RBP5.85□□□□□ -1.47
CD55-208ENST00000476590 PSEN1P49768 467 aa5.85□□□□□ -1.47
CD55-208ENST00000476590 MRPL50Q8N5N7 158 aaKnown RBP5.85□□□□□ -1.47
CD55-208ENST00000476590 SLC4A5Q9BY07 1137 aa5.85□□□□□ -1.47
CD55-208ENST00000476590 IGSF3O75054 1194 aa5.84□□□□□ -1.47
CD55-208ENST00000476590 MICALL2Q8IY33 904 aa5.84□□□□□ -1.47
CD55-208ENST00000476590 RBM10P98175 930 aaKnown RBP5.84□□□□□ -1.47
CD55-208ENST00000476590 TMEM151AQ8N4L1 468 aa5.84□□□□□ -1.47
CD55-208ENST00000476590 IL27Q8NEV9 243 aa5.83□□□□□ -1.48
CD55-208ENST00000476590 PKD2Q13563 968 aa5.82□□□□□ -1.48
CD55-208ENST00000476590 NISCHQ9Y2I1 1504 aa5.82□□□□□ -1.48
CD55-208ENST00000476590 BHMG1C9JSJ3 638 aaPredicted RBP5.82□□□□□ -1.48
CD55-208ENST00000476590 CCER1Q8TC90 406 aaPredicted RBP5.82□□□□□ -1.48
CD55-208ENST00000476590 CHMP4AQ9BY43 222 aa5.82□□□□□ -1.48
CD55-208ENST00000476590 LORP23490 312 aaPredicted RBP5.81□□□□□ -1.48
CD55-208ENST00000476590 RSPH6AQ9H0K4 717 aa5.81□□□□□ -1.48
CD55-208ENST00000476590 PCDHGA4Q9Y5G9 962 aa5.81□□□□□ -1.48
CD55-208ENST00000476590 IGHA1P01876 353 aa5.8□□□□□ -1.48
CD55-208ENST00000476590 PPP4R3BQ5MIZ7 849 aa5.8□□□□□ -1.48
CD55-208ENST00000476590 KRTAP17-1Q9BYP8 105 aa5.8□□□□□ -1.48
CD55-208ENST00000476590 BBXQ8WY36 941 aaPredicted RBP5.79□□□□□ -1.48
CD55-208ENST00000476590 TERTO14746 1132 aaKnown RBP5.78□□□□□ -1.48
CD55-208ENST00000476590 ARID3AQ99856 593 aa5.78□□□□□ -1.48
CD55-208ENST00000476590 ZNF326Q5BKZ1 582 aaKnown RBP5.77□□□□□ -1.49
CD55-208ENST00000476590 KCNK17Q96T54 332 aa5.77□□□□□ -1.49
CD55-208ENST00000476590 C11orf95C9JLR9 678 aaPredicted RBP5.76□□□□□ -1.49
CD55-208ENST00000476590 ANKK1Q8NFD2 765 aa5.76□□□□□ -1.49
CD55-208ENST00000476590 BRD2P25440 801 aaKnown RBP5.76□□□□□ -1.49
CD55-208ENST00000476590 NBPF3Q9H094 633 aa5.76□□□□□ -1.49
CD55-208ENST00000476590 RSPH4AQ5TD94 716 aa5.75□□□□□ -1.49
CD55-208ENST00000476590 CABP2Q9NPB3 220 aa5.75□□□□□ -1.49
CD55-208ENST00000476590 SLC34A2O95436 690 aa5.74□□□□□ -1.49
CD55-208ENST00000476590 PLCD3Q8N3E9 789 aa5.74□□□□□ -1.49
CD55-208ENST00000476590 NECTIN2Q92692 538 aa5.74□□□□□ -1.49
CD55-208ENST00000476590 SHROOM4Q9ULL8 1493 aa5.74□□□□□ -1.49
CD55-208ENST00000476590 GDF11O95390 407 aa5.74□□□□□ -1.49
CD55-208ENST00000476590 CDK11BP21127 795 aaKnown RBP5.73□□□□□ -1.49
CD55-208ENST00000476590 RTL5Q5HYW3 569 aaPredicted RBP5.73□□□□□ -1.49
CD55-208ENST00000476590 LCE2CQ5TA81 110 aa5.73□□□□□ -1.49
CD55-208ENST00000476590 AAASQ9NRG9 546 aa5.73□□□□□ -1.49
CD55-208ENST00000476590 CDK11AQ9UQ88 783 aaPredicted RBP5.73□□□□□ -1.49
CD55-208ENST00000476590 CCDC9Q9Y3X0 531 aaKnown RBP5.73□□□□□ -1.49
CD55-208ENST00000476590 DHX37Q8IY37 1157 aaKnown RBP5.73□□□□□ -1.49
CD55-208ENST00000476590 BRPF1P55201 1214 aaPredicted RBP5.72□□□□□ -1.49
CD55-208ENST00000476590 LCE1DQ5T752 114 aa5.72□□□□□ -1.49
CD55-208ENST00000476590 IFNLR1Q8IU57 520 aaPredicted RBP5.71□□□□□ -1.5
CD55-208ENST00000476590 NAP1L5Q96NT1 182 aaPredicted RBP5.7□□□□□ -1.5
CD55-208ENST00000476590 DNAJC5Q9H3Z4 198 aa5.7□□□□□ -1.5
CD55-208ENST00000476590 C1orf115Q9H7X2 142 aa5.7□□□□□ -1.5
CD55-208ENST00000476590 FAM187AA6NFU0 413 aa5.7□□□□□ -1.5
CD55-208ENST00000476590 PDAP1Q13442 181 aaKnown RBP5.7□□□□□ -1.5
CD55-208ENST00000476590 SPRYD3Q8NCJ5 442 aa5.7□□□□□ -1.5
CD55-208ENST00000476590 SLC16A10Q8TF71 515 aa5.7□□□□□ -1.5
CD55-208ENST00000476590 NOP58Q9Y2X3 529 aaKnown RBP5.69□□□□□ -1.5
CD55-208ENST00000476590 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.69□□□□□ -1.5
CD55-208ENST00000476590 ST8SIA5O15466 376 aa5.68□□□□□ -1.5
CD55-208ENST00000476590 RRP9O43818 475 aaKnown RBP5.68□□□□□ -1.5
CD55-208ENST00000476590 GSK3AP49840 483 aa5.68□□□□□ -1.5
CD55-208ENST00000476590 NAP1L2Q9ULW6 460 aaPredicted RBP5.68□□□□□ -1.5
CD55-208ENST00000476590 PRR20EP86478 221 aa5.67□□□□□ -1.5
CD55-208ENST00000476590 PRR20CP86479 221 aa5.67□□□□□ -1.5
CD55-208ENST00000476590 PRR20DP86480 221 aa5.67□□□□□ -1.5
CD55-208ENST00000476590 PRR20BP86481 221 aa5.67□□□□□ -1.5
CD55-208ENST00000476590 PRR20AP86496 221 aa5.67□□□□□ -1.5
CD55-208ENST00000476590 PPP1R18Q6NYC8 613 aa5.67□□□□□ -1.5
CD55-208ENST00000476590 WASHC2CQ9Y4E1 1318 aa5.67□□□□□ -1.5
CD55-208ENST00000476590 RASSF7Q02833 373 aa5.66□□□□□ -1.5
CD55-208ENST00000476590 KRTAP4-2Q9BYR5 136 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms