RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 RNF17Q9BXT8 1623 aaKnown RBP19.66■□□□□ 0.74
PSMB4-204ENST00000476467 ACIN1Q9UKV3 1341 aaKnown RBP19.66■□□□□ 0.74
PSMB4-204ENST00000476467 KIF3BO15066 747 aa19.63■□□□□ 0.73
PSMB4-204ENST00000476467 MROH1Q8NDA8 1641 aa19.62■□□□□ 0.73
PSMB4-204ENST00000476467 PRDM15P57071 1507 aaPredicted RBP19.62■□□□□ 0.73
PSMB4-204ENST00000476467 KDM5DQ9BY66 1539 aa19.61■□□□□ 0.73
PSMB4-204ENST00000476467 IQGAP3Q86VI3 1631 aa19.58■□□□□ 0.72
PSMB4-204ENST00000476467 TRIM52Q96A61 297 aa19.58■□□□□ 0.72
PSMB4-204ENST00000476467 VWDEQ8N2E2 1590 aa19.57■□□□□ 0.72
PSMB4-204ENST00000476467 NUP155O75694 1391 aa19.57■□□□□ 0.72
PSMB4-204ENST00000476467 KANK1Q14678 1352 aa19.55■□□□□ 0.72
PSMB4-204ENST00000476467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.55■□□□□ 0.72
PSMB4-204ENST00000476467 PZPP20742 1482 aa19.55■□□□□ 0.72
PSMB4-204ENST00000476467 ARID4BQ4LE39 1312 aaPredicted RBP19.55■□□□□ 0.72
PSMB4-204ENST00000476467 FAM135AQ9P2D6 1515 aa19.55■□□□□ 0.72
PSMB4-204ENST00000476467 GGT6Q6P531 493 aa19.54■□□□□ 0.72
PSMB4-204ENST00000476467 ZC3H13Q5T200 1668 aaKnown RBP19.53■□□□□ 0.72
PSMB4-204ENST00000476467 LMTK2Q8IWU2 1503 aa19.52■□□□□ 0.71
PSMB4-204ENST00000476467 CEP152O94986 1710 aa19.52■□□□□ 0.71
PSMB4-204ENST00000476467 ABCC3O15438 1527 aa19.51■□□□□ 0.71
PSMB4-204ENST00000476467 PPP6R1Q9UPN7 881 aa19.51■□□□□ 0.71
PSMB4-204ENST00000476467 TET3O43151 1660 aa19.5■□□□□ 0.71
PSMB4-204ENST00000476467 DHX57Q6P158 1386 aaKnown RBP19.5■□□□□ 0.71
PSMB4-204ENST00000476467 MLECQ14165 292 aa19.48■□□□□ 0.71
PSMB4-204ENST00000476467 MPHOSPH9Q99550 1183 aa19.48■□□□□ 0.71
PSMB4-204ENST00000476467 SLC4A1APQ9BWU0 796 aaKnown RBP19.48■□□□□ 0.71
PSMB4-204ENST00000476467 EFCAB6Q5THR3 1501 aa19.47■□□□□ 0.71
PSMB4-204ENST00000476467 WASHC2CQ9Y4E1 1318 aa19.46■□□□□ 0.71
PSMB4-204ENST00000476467 CAMSAP1Q5T5Y3 1602 aa19.46■□□□□ 0.71
PSMB4-204ENST00000476467 CLTCQ00610 1675 aaKnown RBP19.45■□□□□ 0.7
PSMB4-204ENST00000476467 FER1L4A9Z1Z3 1794 aa19.44■□□□□ 0.7
PSMB4-204ENST00000476467 CNTLNQ9NXG0 1405 aa19.43■□□□□ 0.7
PSMB4-204ENST00000476467 E9PCH4 1651 aa19.43■□□□□ 0.7
PSMB4-204ENST00000476467 ADAMTSL3P82987 1691 aa19.42■□□□□ 0.7
PSMB4-204ENST00000476467 PKD2Q13563 968 aa19.42■□□□□ 0.7
PSMB4-204ENST00000476467 MROH2AA6NES4 1674 aa19.42■□□□□ 0.7
PSMB4-204ENST00000476467 ESF1Q9H501 851 aaKnown RBP19.41■□□□□ 0.7
PSMB4-204ENST00000476467 ARHGAP31Q2M1Z3 1444 aa19.41■□□□□ 0.7
PSMB4-204ENST00000476467 RPRD2Q5VT52 1461 aaKnown RBP19.4■□□□□ 0.7
PSMB4-204ENST00000476467 MADDQ8WXG6 1647 aa19.4■□□□□ 0.7
PSMB4-204ENST00000476467 CCER1Q8TC90 406 aaPredicted RBP19.39■□□□□ 0.69
PSMB4-204ENST00000476467 NPATQ14207 1427 aa19.39■□□□□ 0.69
PSMB4-204ENST00000476467 RIMS1Q86UR5 1692 aaKnown RBP19.36■□□□□ 0.69
PSMB4-204ENST00000476467 FOXD1Q16676 465 aa19.36■□□□□ 0.69
PSMB4-204ENST00000476467 SPHKAPQ2M3C7 1700 aa19.35■□□□□ 0.69
PSMB4-204ENST00000476467 CLSPNQ9HAW4 1339 aa19.35■□□□□ 0.69
PSMB4-204ENST00000476467 ZMYM3Q14202 1370 aa19.34■□□□□ 0.69
PSMB4-204ENST00000476467 ANKRD30BQ9BXX2 1392 aa19.33■□□□□ 0.69
PSMB4-204ENST00000476467 PREX1Q8TCU6 1659 aa19.33■□□□□ 0.69
PSMB4-204ENST00000476467 PTPRTO14522 1441 aa19.33■□□□□ 0.69
PSMB4-204ENST00000476467 C3P01024 1663 aa19.32■□□□□ 0.68
PSMB4-204ENST00000476467 TRPM2O94759 1503 aa19.32■□□□□ 0.68
PSMB4-204ENST00000476467 ERVK-7P63135 1459 aa19.31■□□□□ 0.68
PSMB4-204ENST00000476467 PLA2R1Q13018 1463 aa19.31■□□□□ 0.68
PSMB4-204ENST00000476467 NOS1P29475 1434 aa19.31■□□□□ 0.68
PSMB4-204ENST00000476467 CFAP65Q6ZU64 1925 aaKnown RBP19.3■□□□□ 0.68
PSMB4-204ENST00000476467 SPATA31D1Q6ZQQ2 1576 aa19.29■□□□□ 0.68
PSMB4-204ENST00000476467 SYNMO15061 1565 aa19.28■□□□□ 0.68
PSMB4-204ENST00000476467 CCDC144AA2RUR9 1427 aa19.25■□□□□ 0.67
PSMB4-204ENST00000476467 FBXO31Q5XUX0 539 aaPredicted RBP19.25■□□□□ 0.67
PSMB4-204ENST00000476467 CLTCL1P53675 1640 aa19.25■□□□□ 0.67
PSMB4-204ENST00000476467 PTPRMP28827 1452 aa19.24■□□□□ 0.67
PSMB4-204ENST00000476467 PIK3C2BO00750 1634 aa19.24■□□□□ 0.67
PSMB4-204ENST00000476467 CEBPAP49715 358 aaPredicted RBP19.23■□□□□ 0.67
PSMB4-204ENST00000476467 UGGT1Q9NYU2 1555 aa19.23■□□□□ 0.67
PSMB4-204ENST00000476467 TNRQ92752 1358 aa19.22■□□□□ 0.67
PSMB4-204ENST00000476467 KDM4FA0A1W2PPD8 638 aa19.21■□□□□ 0.67
PSMB4-204ENST00000476467 SIN3AQ96ST3 1273 aa19.21■□□□□ 0.67
PSMB4-204ENST00000476467 SLC52A1Q9NWF4 448 aa19.18■□□□□ 0.66
PSMB4-204ENST00000476467 KIF1BO60333 1816 aa19.18■□□□□ 0.66
PSMB4-204ENST00000476467 NEUROD1Q13562 356 aa19.17■□□□□ 0.66
PSMB4-204ENST00000476467 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
PSMB4-204ENST00000476467 NLRP1Q9C000 1473 aa19.16■□□□□ 0.66
PSMB4-204ENST00000476467 NEURL4Q96JN8 1562 aa19.16■□□□□ 0.66
PSMB4-204ENST00000476467 MYO3AQ8NEV4 1616 aa19.15■□□□□ 0.66
PSMB4-204ENST00000476467 ADGRB3O60242 1522 aa19.15■□□□□ 0.66
PSMB4-204ENST00000476467 IDI1Q13907 227 aa19.14■□□□□ 0.65
PSMB4-204ENST00000476467 SPATA31E1Q6ZUB1 1445 aa19.14■□□□□ 0.65
PSMB4-204ENST00000476467 SETD1BQ9UPS6 1966 aaKnown RBP19.13■□□□□ 0.65
PSMB4-204ENST00000476467 TMEM131LA2VDJ0 1609 aa19.12■□□□□ 0.65
PSMB4-204ENST00000476467 KDM5AP29375 1690 aaKnown RBP19.12■□□□□ 0.65
PSMB4-204ENST00000476467 TONSLQ96HA7 1378 aa19.11■□□□□ 0.65
PSMB4-204ENST00000476467 ZNF142P52746 1687 aaPredicted RBP19.1■□□□□ 0.65
PSMB4-204ENST00000476467 TIMELESSQ9UNS1 1208 aa19.09■□□□□ 0.65
PSMB4-204ENST00000476467 MYO5BQ9ULV0 1848 aa19.09■□□□□ 0.65
PSMB4-204ENST00000476467 A2ML1A8K2U0 1454 aa19.09■□□□□ 0.65
PSMB4-204ENST00000476467 UBR1Q8IWV7 1749 aa19.09■□□□□ 0.65
PSMB4-204ENST00000476467 CEP170BQ9Y4F5 1589 aaPredicted RBP19.09■□□□□ 0.65
PSMB4-204ENST00000476467 CHGAP10645 457 aaKnown RBP19.08■□□□□ 0.64
PSMB4-204ENST00000476467 UHRF1BP1Q6BDS2 1440 aa19.06■□□□□ 0.64
PSMB4-204ENST00000476467 STAG3Q9UJ98 1225 aa19.06■□□□□ 0.64
PSMB4-204ENST00000476467 RGL3Q3MIN7 710 aa19.05■□□□□ 0.64
PSMB4-204ENST00000476467 IFT172Q9UG01 1749 aa19.04■□□□□ 0.64
PSMB4-204ENST00000476467 L3MBTL2Q969R5 705 aa19.04■□□□□ 0.64
PSMB4-204ENST00000476467 PPLO60437 1756 aa19.03■□□□□ 0.64
PSMB4-204ENST00000476467 ZNF326Q5BKZ1 582 aaKnown RBP19.02■□□□□ 0.64
PSMB4-204ENST00000476467 NEXMIFQ5QGS0 1516 aa19.02■□□□□ 0.64
PSMB4-204ENST00000476467 RPGRIP1LQ68CZ1 1315 aa19.02■□□□□ 0.63
PSMB4-204ENST00000476467 MYOM2P54296 1465 aa18.99■□□□□ 0.63
PSMB4-204ENST00000476467 SLIT1O75093 1534 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms