RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 MTUS2Q5JR59 1369 aa17.91■□□□□ 0.46
EXOSC1-208ENST00000476234 TIAM1Q13009 1591 aa17.91■□□□□ 0.46
EXOSC1-208ENST00000476234 ZNF644Q9H582 1327 aaPredicted RBP17.91■□□□□ 0.46
EXOSC1-208ENST00000476234 DHX29Q7Z478 1369 aaKnown RBP17.9■□□□□ 0.46
EXOSC1-208ENST00000476234 FAM135AQ9P2D6 1515 aa17.88■□□□□ 0.45
EXOSC1-208ENST00000476234 NEURL4Q96JN8 1562 aa17.87■□□□□ 0.45
EXOSC1-208ENST00000476234 CEP162Q5TB80 1403 aa17.87■□□□□ 0.45
EXOSC1-208ENST00000476234 EHBP1L1Q8N3D4 1523 aa17.87■□□□□ 0.45
EXOSC1-208ENST00000476234 PZPP20742 1482 aa17.85■□□□□ 0.45
EXOSC1-208ENST00000476234 CPS1P31327 1500 aa17.85■□□□□ 0.45
EXOSC1-208ENST00000476234 POLR1AO95602 1720 aaPredicted RBP17.84■□□□□ 0.45
EXOSC1-208ENST00000476234 TNRQ92752 1358 aa17.84■□□□□ 0.45
EXOSC1-208ENST00000476234 KDM5DQ9BY66 1539 aa17.83■□□□□ 0.45
EXOSC1-208ENST00000476234 SHANK2Q9UPX8 1470 aa17.83■□□□□ 0.45
EXOSC1-208ENST00000476234 FBXO31Q5XUX0 539 aaPredicted RBP17.83■□□□□ 0.44
EXOSC1-208ENST00000476234 LOC105371045A0A1W2PR82 267 aa17.82■□□□□ 0.44
EXOSC1-208ENST00000476234 KIF3BO15066 747 aa17.81■□□□□ 0.44
EXOSC1-208ENST00000476234 CCDC141Q6ZP82 1450 aa17.81■□□□□ 0.44
EXOSC1-208ENST00000476234 RSPH4AQ5TD94 716 aa17.8■□□□□ 0.44
EXOSC1-208ENST00000476234 MED14O60244 1454 aa17.8■□□□□ 0.44
EXOSC1-208ENST00000476234 VWDEQ8N2E2 1590 aa17.79■□□□□ 0.44
EXOSC1-208ENST00000476234 TOM1O60784 492 aa17.79■□□□□ 0.44
EXOSC1-208ENST00000476234 HSPA1LP34931 641 aa17.79■□□□□ 0.44
EXOSC1-208ENST00000476234 NLRP1Q9C000 1473 aa17.79■□□□□ 0.44
EXOSC1-208ENST00000476234 MIA2Q96PC5 1412 aa17.79■□□□□ 0.44
EXOSC1-208ENST00000476234 MED1Q15648 1581 aaPredicted RBP17.78■□□□□ 0.44
EXOSC1-208ENST00000476234 CAMSAP2Q08AD1 1489 aa17.77■□□□□ 0.44
EXOSC1-208ENST00000476234 DEPDC5O75140 1603 aa17.77■□□□□ 0.44
EXOSC1-208ENST00000476234 ANKLE2Q86XL3 938 aa17.77■□□□□ 0.44
EXOSC1-208ENST00000476234 THEMISQ8N1K5 641 aaPredicted RBP17.77■□□□□ 0.44
EXOSC1-208ENST00000476234 ALKQ9UM73 1620 aa17.76■□□□□ 0.43
EXOSC1-208ENST00000476234 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
EXOSC1-208ENST00000476234 WASHC2CQ9Y4E1 1318 aa17.76■□□□□ 0.43
EXOSC1-208ENST00000476234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.76■□□□□ 0.43
EXOSC1-208ENST00000476234 ARHGEF5Q12774 1597 aa17.75■□□□□ 0.43
EXOSC1-208ENST00000476234 UGGT1Q9NYU2 1555 aa17.74■□□□□ 0.43
EXOSC1-208ENST00000476234 NPHP4O75161 1426 aaPredicted RBP17.74■□□□□ 0.43
EXOSC1-208ENST00000476234 PIP4K2BP78356 416 aa17.73■□□□□ 0.43
EXOSC1-208ENST00000476234 RNF17Q9BXT8 1623 aaKnown RBP17.71■□□□□ 0.43
EXOSC1-208ENST00000476234 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.42
EXOSC1-208ENST00000476234 ABCC3O15438 1527 aa17.69■□□□□ 0.42
EXOSC1-208ENST00000476234 IQGAP1P46940 1657 aa17.69■□□□□ 0.42
EXOSC1-208ENST00000476234 MAST1Q9Y2H9 1570 aa17.68■□□□□ 0.42
EXOSC1-208ENST00000476234 ZC3H13Q5T200 1668 aaKnown RBP17.67■□□□□ 0.42
EXOSC1-208ENST00000476234 STRCP1A6NGW2 1772 aa17.67■□□□□ 0.42
EXOSC1-208ENST00000476234 TSPY4P0CV99 314 aa17.67■□□□□ 0.42
EXOSC1-208ENST00000476234 TSPY10P0CW01 314 aa17.67■□□□□ 0.42
EXOSC1-208ENST00000476234 LRRC7Q96NW7 1537 aa17.67■□□□□ 0.42
EXOSC1-208ENST00000476234 MROH1Q8NDA8 1641 aa17.65■□□□□ 0.42
EXOSC1-208ENST00000476234 EIF2AK4Q9P2K8 1649 aaKnown RBP17.65■□□□□ 0.42
EXOSC1-208ENST00000476234 ERVK-7P63135 1459 aa17.65■□□□□ 0.42
EXOSC1-208ENST00000476234 SYNMO15061 1565 aa17.65■□□□□ 0.42
EXOSC1-208ENST00000476234 LRRC9Q6ZRR7 1453 aa17.62■□□□□ 0.41
EXOSC1-208ENST00000476234 UBR1Q8IWV7 1749 aa17.61■□□□□ 0.41
EXOSC1-208ENST00000476234 ARHGAP23Q9P227 1491 aa17.6■□□□□ 0.41
EXOSC1-208ENST00000476234 SLIT1O75093 1534 aa17.59■□□□□ 0.41
EXOSC1-208ENST00000476234 SCAF11Q99590 1463 aaKnown RBP17.58■□□□□ 0.41
EXOSC1-208ENST00000476234 VPS8Q8N3P4 1428 aa17.58■□□□□ 0.41
EXOSC1-208ENST00000476234 ARHGAP31Q2M1Z3 1444 aa17.57■□□□□ 0.4
EXOSC1-208ENST00000476234 DUOX2Q9NRD8 1548 aa17.56■□□□□ 0.4
EXOSC1-208ENST00000476234 CEP152O94986 1710 aa17.55■□□□□ 0.4
EXOSC1-208ENST00000476234 LTKP29376 864 aa17.55■□□□□ 0.4
EXOSC1-208ENST00000476234 MAP3K1Q13233 1512 aa17.55■□□□□ 0.4
EXOSC1-208ENST00000476234 PRDM15P57071 1507 aaPredicted RBP17.54■□□□□ 0.4
EXOSC1-208ENST00000476234 KANK4Q5T7N3 995 aaPredicted RBP17.54■□□□□ 0.4
EXOSC1-208ENST00000476234 MYOM3Q5VTT5 1437 aa17.54■□□□□ 0.4
EXOSC1-208ENST00000476234 XIRP1Q702N8 1843 aaKnown RBP17.52■□□□□ 0.4
EXOSC1-208ENST00000476234 TXNDC2Q86VQ3 553 aa17.52■□□□□ 0.4
EXOSC1-208ENST00000476234 RGS17Q9UGC6 210 aaPredicted RBP17.51■□□□□ 0.39
EXOSC1-208ENST00000476234 ERBINQ96RT1 1412 aa17.5■□□□□ 0.39
EXOSC1-208ENST00000476234 FAM135BQ49AJ0 1406 aa17.49■□□□□ 0.39
EXOSC1-208ENST00000476234 TMEM2Q9UHN6 1383 aa17.49■□□□□ 0.39
EXOSC1-208ENST00000476234 CFAP65Q6ZU64 1925 aaKnown RBP17.49■□□□□ 0.39
EXOSC1-208ENST00000476234 KIF15Q9NS87 1388 aa17.48■□□□□ 0.39
EXOSC1-208ENST00000476234 KDM5AP29375 1690 aaKnown RBP17.48■□□□□ 0.39
EXOSC1-208ENST00000476234 PIK3C2BO00750 1634 aa17.47■□□□□ 0.39
EXOSC1-208ENST00000476234 ABCC5O15440 1437 aa17.47■□□□□ 0.39
EXOSC1-208ENST00000476234 EID1Q9Y6B2 187 aa17.46■□□□□ 0.39
EXOSC1-208ENST00000476234 CROCC2H7BZ55 1655 aa17.45■□□□□ 0.38
EXOSC1-208ENST00000476234 LMTK2Q8IWU2 1503 aa17.44■□□□□ 0.38
EXOSC1-208ENST00000476234 TET3O43151 1660 aa17.44■□□□□ 0.38
EXOSC1-208ENST00000476234 EFCAB6Q5THR3 1501 aa17.42■□□□□ 0.38
EXOSC1-208ENST00000476234 TMEM94Q12767 1356 aa17.42■□□□□ 0.38
EXOSC1-208ENST00000476234 KCNA6P17658 529 aa17.42■□□□□ 0.38
EXOSC1-208ENST00000476234 MAPK8IP2Q13387 824 aaPredicted RBP17.42■□□□□ 0.38
EXOSC1-208ENST00000476234 IDI1Q13907 227 aa17.41■□□□□ 0.38
EXOSC1-208ENST00000476234 RRP7BPQ9NSQ0 103 aa17.41■□□□□ 0.38
EXOSC1-208ENST00000476234 DAPK1P53355 1430 aa17.4■□□□□ 0.38
EXOSC1-208ENST00000476234 KANK1Q14678 1352 aa17.4■□□□□ 0.38
EXOSC1-208ENST00000476234 PTPN23Q9H3S7 1636 aa17.39■□□□□ 0.38
EXOSC1-208ENST00000476234 NOS1P29475 1434 aa17.39■□□□□ 0.38
EXOSC1-208ENST00000476234 NWD1Q149M9 1564 aa17.38■□□□□ 0.37
EXOSC1-208ENST00000476234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
EXOSC1-208ENST00000476234 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
EXOSC1-208ENST00000476234 ROBO1Q9Y6N7 1651 aa17.37■□□□□ 0.37
EXOSC1-208ENST00000476234 POTEAQ6S8J7 498 aa17.36■□□□□ 0.37
EXOSC1-208ENST00000476234 STAG3Q9UJ98 1225 aa17.36■□□□□ 0.37
EXOSC1-208ENST00000476234 ADGRB3O60242 1522 aa17.36■□□□□ 0.37
EXOSC1-208ENST00000476234 SLC26A8Q96RN1 970 aa17.35■□□□□ 0.37
EXOSC1-208ENST00000476234 FGD6Q6ZV73 1430 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms