RNA–Protein interactions for RNA: ENST00000476086.6

NR1H3-219, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-219ENST00000476086 TRIM52Q96A61 297 aa28.11■■■□□ 2.09
NR1H3-219ENST00000476086 RNF17Q9BXT8 1623 aaKnown RBP28.1■■■□□ 2.09
NR1H3-219ENST00000476086 KANK1Q14678 1352 aa28.06■■■□□ 2.08
NR1H3-219ENST00000476086 KDM5DQ9BY66 1539 aa28.06■■■□□ 2.08
NR1H3-219ENST00000476086 PRDM15P57071 1507 aaPredicted RBP28.04■■■□□ 2.08
NR1H3-219ENST00000476086 NUP155O75694 1391 aa28.04■■■□□ 2.08
NR1H3-219ENST00000476086 IQGAP3Q86VI3 1631 aa28.03■■■□□ 2.08
NR1H3-219ENST00000476086 SIGLEC1Q9BZZ2 1709 aa28.01■■■□□ 2.07
NR1H3-219ENST00000476086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.01■■■□□ 2.072e-6■■□□□ 13
NR1H3-219ENST00000476086 MROH1Q8NDA8 1641 aa28■■■□□ 2.07
NR1H3-219ENST00000476086 ARID4BQ4LE39 1312 aaPredicted RBP27.99■■■□□ 2.07
NR1H3-219ENST00000476086 GGT6Q6P531 493 aa27.99■■■□□ 2.07
NR1H3-219ENST00000476086 FAM135AQ9P2D6 1515 aa27.97■■■□□ 2.07
NR1H3-219ENST00000476086 PPP6R1Q9UPN7 881 aa27.97■■■□□ 2.07
NR1H3-219ENST00000476086 VWDEQ8N2E2 1590 aa27.97■■■□□ 2.07
NR1H3-219ENST00000476086 ZC3H13Q5T200 1668 aaKnown RBP27.97■■■□□ 2.07
NR1H3-219ENST00000476086 SLC4A1APQ9BWU0 796 aaKnown RBP27.95■■■□□ 2.06
NR1H3-219ENST00000476086 PZPP20742 1482 aa27.95■■■□□ 2.06
NR1H3-219ENST00000476086 MPHOSPH9Q99550 1183 aa27.94■■■□□ 2.06
NR1H3-219ENST00000476086 DHX57Q6P158 1386 aaKnown RBP27.94■■■□□ 2.06
NR1H3-219ENST00000476086 TET3O43151 1660 aa27.92■■■□□ 2.06
NR1H3-219ENST00000476086 CEP152O94986 1710 aa27.92■■■□□ 2.06
NR1H3-219ENST00000476086 CCER1Q8TC90 406 aaPredicted RBP27.91■■■□□ 2.06
NR1H3-219ENST00000476086 LMTK2Q8IWU2 1503 aa27.91■■■□□ 2.06
NR1H3-219ENST00000476086 WASHC2CQ9Y4E1 1318 aa27.9■■■□□ 2.06
NR1H3-219ENST00000476086 ABCC3O15438 1527 aa27.87■■■□□ 2.05
NR1H3-219ENST00000476086 MLECQ14165 292 aa27.86■■■□□ 2.05
NR1H3-219ENST00000476086 ESF1Q9H501 851 aaKnown RBP27.86■■■□□ 2.05
NR1H3-219ENST00000476086 CLSPNQ9HAW4 1339 aa27.85■■■□□ 2.05
NR1H3-219ENST00000476086 CAMSAP1Q5T5Y3 1602 aa27.84■■■□□ 2.05
NR1H3-219ENST00000476086 PKD2Q13563 968 aa27.83■■■□□ 2.05
NR1H3-219ENST00000476086 EFCAB6Q5THR3 1501 aa27.82■■■□□ 2.04
NR1H3-219ENST00000476086 CLTCQ00610 1675 aaKnown RBP27.82■■■□□ 2.04
NR1H3-219ENST00000476086 CNTLNQ9NXG0 1405 aa27.81■■■□□ 2.04
NR1H3-219ENST00000476086 E9PCH4 1651 aa27.81■■■□□ 2.04
NR1H3-219ENST00000476086 FER1L4A9Z1Z3 1794 aa27.81■■■□□ 2.04
NR1H3-219ENST00000476086 RPRD2Q5VT52 1461 aaKnown RBP27.79■■■□□ 2.04
NR1H3-219ENST00000476086 MROH2AA6NES4 1674 aa27.78■■■□□ 2.04
NR1H3-219ENST00000476086 ARHGAP31Q2M1Z3 1444 aa27.76■■■□□ 2.04
NR1H3-219ENST00000476086 SPHKAPQ2M3C7 1700 aa27.72■■■□□ 2.03
NR1H3-219ENST00000476086 ADAMTSL3P82987 1691 aa27.72■■■□□ 2.03
NR1H3-219ENST00000476086 FOXD1Q16676 465 aa27.71■■■□□ 2.03
NR1H3-219ENST00000476086 NPATQ14207 1427 aa27.7■■■□□ 2.03
NR1H3-219ENST00000476086 CFAP65Q6ZU64 1925 aaKnown RBP27.7■■■□□ 2.02
NR1H3-219ENST00000476086 ANKRD30BQ9BXX2 1392 aa27.69■■■□□ 2.02
NR1H3-219ENST00000476086 MADDQ8WXG6 1647 aa27.67■■■□□ 2.02
NR1H3-219ENST00000476086 ZMYM3Q14202 1370 aa27.66■■■□□ 2.02
NR1H3-219ENST00000476086 PREX1Q8TCU6 1659 aa27.65■■■□□ 2.02
NR1H3-219ENST00000476086 PTPRTO14522 1441 aa27.65■■■□□ 2.02
NR1H3-219ENST00000476086 RIMS1Q86UR5 1692 aaKnown RBP27.65■■■□□ 2.02
NR1H3-219ENST00000476086 TRPM2O94759 1503 aa27.64■■■□□ 2.02
NR1H3-219ENST00000476086 C3P01024 1663 aa27.62■■■□□ 2.01
NR1H3-219ENST00000476086 CCDC144AA2RUR9 1427 aa27.6■■■□□ 2.01
NR1H3-219ENST00000476086 NOS1P29475 1434 aa27.59■■■□□ 2.01
NR1H3-219ENST00000476086 ERVK-7P63135 1459 aa27.58■■■□□ 2.01
NR1H3-219ENST00000476086 PLA2R1Q13018 1463 aa27.58■■■□□ 2.01
NR1H3-219ENST00000476086 SPATA31D1Q6ZQQ2 1576 aa27.58■■■□□ 2.01
NR1H3-219ENST00000476086 KIF1BO60333 1816 aa27.53■■■□□ 2
NR1H3-219ENST00000476086 SYNMO15061 1565 aa27.53■■■□□ 2
NR1H3-219ENST00000476086 NEUROD1Q13562 356 aa27.53■■■□□ 2
NR1H3-219ENST00000476086 SIN3AQ96ST3 1273 aa27.53■■■□□ 2
NR1H3-219ENST00000476086 CLTCL1P53675 1640 aa27.52■■■□□ 2
NR1H3-219ENST00000476086 ZEB1P37275 1124 aaPredicted RBP27.52■■■□□ 2
NR1H3-219ENST00000476086 FBXO31Q5XUX0 539 aaPredicted RBP27.51■■□□□ 1.99
NR1H3-219ENST00000476086 SLC52A1Q9NWF4 448 aa27.51■■□□□ 1.99
NR1H3-219ENST00000476086 PIK3C2BO00750 1634 aa27.51■■□□□ 1.99
NR1H3-219ENST00000476086 TIMELESSQ9UNS1 1208 aa27.49■■□□□ 1.99
NR1H3-219ENST00000476086 TNRQ92752 1358 aa27.48■■□□□ 1.99
NR1H3-219ENST00000476086 PTPRMP28827 1452 aa27.46■■□□□ 1.99
NR1H3-219ENST00000476086 CEBPAP49715 358 aaPredicted RBP27.46■■□□□ 1.99
NR1H3-219ENST00000476086 TONSLQ96HA7 1378 aa27.46■■□□□ 1.99
NR1H3-219ENST00000476086 NEURL4Q96JN8 1562 aa27.45■■□□□ 1.99
NR1H3-219ENST00000476086 UGGT1Q9NYU2 1555 aa27.44■■□□□ 1.98
NR1H3-219ENST00000476086 SETD1BQ9UPS6 1966 aaKnown RBP27.44■■□□□ 1.98
NR1H3-219ENST00000476086 NLRP1Q9C000 1473 aa27.41■■□□□ 1.98
NR1H3-219ENST00000476086 PLPPR3Q6T4P5 718 aa27.41■■□□□ 1.98
NR1H3-219ENST00000476086 IDI1Q13907 227 aa27.4■■□□□ 1.98
NR1H3-219ENST00000476086 KDM5AP29375 1690 aaKnown RBP27.39■■□□□ 1.97
NR1H3-219ENST00000476086 ADGRB3O60242 1522 aa27.37■■□□□ 1.97
NR1H3-219ENST00000476086 SPATA31E1Q6ZUB1 1445 aa27.37■■□□□ 1.97
NR1H3-219ENST00000476086 KDM4FA0A1W2PPD8 638 aa27.36■■□□□ 1.97
NR1H3-219ENST00000476086 MYO3AQ8NEV4 1616 aa27.36■■□□□ 1.97
NR1H3-219ENST00000476086 TMEM131LA2VDJ0 1609 aa27.35■■□□□ 1.97
NR1H3-219ENST00000476086 CHGAP10645 457 aaKnown RBP27.35■■□□□ 1.97
NR1H3-219ENST00000476086 STAG3Q9UJ98 1225 aa27.35■■□□□ 1.97
NR1H3-219ENST00000476086 MYO5BQ9ULV0 1848 aa27.33■■□□□ 1.97
NR1H3-219ENST00000476086 RGL3Q3MIN7 710 aa27.32■■□□□ 1.96
NR1H3-219ENST00000476086 L3MBTL2Q969R5 705 aa27.3■■□□□ 1.96
NR1H3-219ENST00000476086 STAC3Q96MF2 364 aa27.3■■□□□ 1.96
NR1H3-219ENST00000476086 UBR1Q8IWV7 1749 aa27.3■■□□□ 1.96
NR1H3-219ENST00000476086 ZNF326Q5BKZ1 582 aaKnown RBP27.29■■□□□ 1.96
NR1H3-219ENST00000476086 ZNF142P52746 1687 aaPredicted RBP27.29■■□□□ 1.96
NR1H3-219ENST00000476086 A2ML1A8K2U0 1454 aa27.28■■□□□ 1.96
NR1H3-219ENST00000476086 RPGRIP1LQ68CZ1 1315 aa27.28■■□□□ 1.96
NR1H3-219ENST00000476086 IFT172Q9UG01 1749 aa27.27■■□□□ 1.96
NR1H3-219ENST00000476086 CEP170BQ9Y4F5 1589 aaPredicted RBP27.26■■□□□ 1.96
NR1H3-219ENST00000476086 PPLO60437 1756 aa27.25■■□□□ 1.95
NR1H3-219ENST00000476086 UHRF1BP1Q6BDS2 1440 aa27.24■■□□□ 1.95
NR1H3-219ENST00000476086 DCAF11Q8TEB1 546 aa27.24■■□□□ 1.95
NR1H3-219ENST00000476086 PPP1R15AO75807 674 aaPredicted RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms