RNA–Protein interactions for RNA: ENST00000475727.1

LHX9-205, Transcript of LIM homeobox 9, humanhuman

TSL 1 (best)

Gene LHX9, Length 259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-205ENST00000475727 RAB3GAP2Q9H2M9 1393 aa16.1■□□□□ 0.17
LHX9-205ENST00000475727 ESF1Q9H501 851 aaKnown RBP16.09■□□□□ 0.17
LHX9-205ENST00000475727 KANK1Q14678 1352 aa16.09■□□□□ 0.17
LHX9-205ENST00000475727 HRCP23327 699 aa16.08■□□□□ 0.16
LHX9-205ENST00000475727 BCORL1Q5H9F3 1711 aa16.08■□□□□ 0.16
LHX9-205ENST00000475727 PPP6R1Q9UPN7 881 aa16.06■□□□□ 0.16
LHX9-205ENST00000475727 SIGLEC1Q9BZZ2 1709 aa16.05■□□□□ 0.16
LHX9-205ENST00000475727 RNF17Q9BXT8 1623 aaKnown RBP16.05■□□□□ 0.16
LHX9-205ENST00000475727 NUP155O75694 1391 aa16.05■□□□□ 0.16
LHX9-205ENST00000475727 WASHC2CQ9Y4E1 1318 aa16.03■□□□□ 0.16
LHX9-205ENST00000475727 DEPDC5O75140 1603 aa16.03■□□□□ 0.16
LHX9-205ENST00000475727 UNC13BO14795 1591 aa16.03■□□□□ 0.16
LHX9-205ENST00000475727 PRDM15P57071 1507 aaPredicted RBP16.01■□□□□ 0.15
LHX9-205ENST00000475727 FAM135AQ9P2D6 1515 aa16■□□□□ 0.15
LHX9-205ENST00000475727 MROH1Q8NDA8 1641 aa15.99■□□□□ 0.15
LHX9-205ENST00000475727 SLC4A1APQ9BWU0 796 aaKnown RBP15.99■□□□□ 0.15
LHX9-205ENST00000475727 CNTLNQ9NXG0 1405 aa15.99■□□□□ 0.15
LHX9-205ENST00000475727 KDM5DQ9BY66 1539 aa15.99■□□□□ 0.15
LHX9-205ENST00000475727 ZC3H13Q5T200 1668 aaKnown RBP15.98■□□□□ 0.15
LHX9-205ENST00000475727 FER1L4A9Z1Z3 1794 aa15.97■□□□□ 0.15
LHX9-205ENST00000475727 IQGAP3Q86VI3 1631 aa15.97■□□□□ 0.15
LHX9-205ENST00000475727 CEP152O94986 1710 aa15.97■□□□□ 0.15
LHX9-205ENST00000475727 ABCC3O15438 1527 aa15.96■□□□□ 0.15
LHX9-205ENST00000475727 VWDEQ8N2E2 1590 aa15.96■□□□□ 0.14
LHX9-205ENST00000475727 CLTCQ00610 1675 aaKnown RBP15.95■□□□□ 0.14
LHX9-205ENST00000475727 MPHOSPH9Q99550 1183 aa15.95■□□□□ 0.14
LHX9-205ENST00000475727 LMTK2Q8IWU2 1503 aa15.94■□□□□ 0.14
LHX9-205ENST00000475727 ADAMTSL3P82987 1691 aa15.94■□□□□ 0.14
LHX9-205ENST00000475727 TET3O43151 1660 aa15.93■□□□□ 0.14
LHX9-205ENST00000475727 PZPP20742 1482 aa15.93■□□□□ 0.14
LHX9-205ENST00000475727 MADDQ8WXG6 1647 aa15.93■□□□□ 0.14
LHX9-205ENST00000475727 PKD2Q13563 968 aa15.92■□□□□ 0.14
LHX9-205ENST00000475727 RIMS1Q86UR5 1692 aaKnown RBP15.92■□□□□ 0.14
LHX9-205ENST00000475727 ZMYM3Q14202 1370 aa15.91■□□□□ 0.14
LHX9-205ENST00000475727 CAMSAP1Q5T5Y3 1602 aa15.91■□□□□ 0.14
LHX9-205ENST00000475727 MROH2AA6NES4 1674 aa15.91■□□□□ 0.14
LHX9-205ENST00000475727 EFCAB6Q5THR3 1501 aa15.9■□□□□ 0.14
LHX9-205ENST00000475727 PLPPR3Q6T4P5 718 aa15.9■□□□□ 0.14
LHX9-205ENST00000475727 ARHGAP31Q2M1Z3 1444 aa15.89■□□□□ 0.13
LHX9-205ENST00000475727 CFAP65Q6ZU64 1925 aaKnown RBP15.88■□□□□ 0.13
LHX9-205ENST00000475727 RPRD2Q5VT52 1461 aaKnown RBP15.87■□□□□ 0.13
LHX9-205ENST00000475727 DHX57Q6P158 1386 aaKnown RBP15.87■□□□□ 0.13
LHX9-205ENST00000475727 NPATQ14207 1427 aa15.86■□□□□ 0.13
LHX9-205ENST00000475727 E9PCH4 1651 aa15.86■□□□□ 0.13
LHX9-205ENST00000475727 KDM4FA0A1W2PPD8 638 aa15.86■□□□□ 0.13
LHX9-205ENST00000475727 CEBPAP49715 358 aaPredicted RBP15.86■□□□□ 0.13
LHX9-205ENST00000475727 FOXD1Q16676 465 aa15.85■□□□□ 0.13
LHX9-205ENST00000475727 PTPRMP28827 1452 aa15.84■□□□□ 0.13
LHX9-205ENST00000475727 C3P01024 1663 aa15.84■□□□□ 0.13
LHX9-205ENST00000475727 CCER1Q8TC90 406 aaPredicted RBP15.84■□□□□ 0.13
LHX9-205ENST00000475727 FBXO31Q5XUX0 539 aaPredicted RBP15.83■□□□□ 0.12
LHX9-205ENST00000475727 ERVK-7P63135 1459 aa15.82■□□□□ 0.12
LHX9-205ENST00000475727 PREX1Q8TCU6 1659 aa15.82■□□□□ 0.12
LHX9-205ENST00000475727 TNRQ92752 1358 aa15.81■□□□□ 0.12
LHX9-205ENST00000475727 SPHKAPQ2M3C7 1700 aa15.8■□□□□ 0.12
LHX9-205ENST00000475727 SPATA31D1Q6ZQQ2 1576 aa15.79■□□□□ 0.12
LHX9-205ENST00000475727 PTPRTO14522 1441 aa15.79■□□□□ 0.12
LHX9-205ENST00000475727 NOS1P29475 1434 aa15.79■□□□□ 0.12
LHX9-205ENST00000475727 SETD1BQ9UPS6 1966 aaKnown RBP15.78■□□□□ 0.12
LHX9-205ENST00000475727 SLC52A1Q9NWF4 448 aa15.78■□□□□ 0.12
LHX9-205ENST00000475727 CCDC144AA2RUR9 1427 aa15.77■□□□□ 0.12
LHX9-205ENST00000475727 ANKRD30BQ9BXX2 1392 aa15.77■□□□□ 0.12
LHX9-205ENST00000475727 TRPM2O94759 1503 aa15.77■□□□□ 0.11
LHX9-205ENST00000475727 CLSPNQ9HAW4 1339 aa15.76■□□□□ 0.11
LHX9-205ENST00000475727 STAG3Q9UJ98 1225 aa15.76■□□□□ 0.11
LHX9-205ENST00000475727 CHGAP10645 457 aaKnown RBP15.75■□□□□ 0.11
LHX9-205ENST00000475727 PLA2R1Q13018 1463 aa15.75■□□□□ 0.11
LHX9-205ENST00000475727 SYNMO15061 1565 aa15.75■□□□□ 0.11
LHX9-205ENST00000475727 NLRP1Q9C000 1473 aa15.73■□□□□ 0.11
LHX9-205ENST00000475727 IDI1Q13907 227 aa15.73■□□□□ 0.11
LHX9-205ENST00000475727 NEUROD1Q13562 356 aa15.72■□□□□ 0.11
LHX9-205ENST00000475727 UHRF1BP1Q6BDS2 1440 aa15.71■□□□□ 0.11
LHX9-205ENST00000475727 CLTCL1P53675 1640 aa15.71■□□□□ 0.11
LHX9-205ENST00000475727 KIF1BO60333 1816 aa15.71■□□□□ 0.1
LHX9-205ENST00000475727 UGGT1Q9NYU2 1555 aa15.7■□□□□ 0.1
LHX9-205ENST00000475727 SIN3AQ96ST3 1273 aa15.7■□□□□ 0.1
LHX9-205ENST00000475727 PIK3C2BO00750 1634 aa15.69■□□□□ 0.1
LHX9-205ENST00000475727 MYO3AQ8NEV4 1616 aa15.69■□□□□ 0.1
LHX9-205ENST00000475727 AEBP2Q6ZN18 517 aaPredicted RBP15.69■□□□□ 0.1
LHX9-205ENST00000475727 A2ML1A8K2U0 1454 aa15.69■□□□□ 0.1
LHX9-205ENST00000475727 ZNF326Q5BKZ1 582 aaKnown RBP15.68■□□□□ 0.1
LHX9-205ENST00000475727 THEMISQ8N1K5 641 aaPredicted RBP15.67■□□□□ 0.1
LHX9-205ENST00000475727 CEP170BQ9Y4F5 1589 aaPredicted RBP15.66■□□□□ 0.1
LHX9-205ENST00000475727 RGL3Q3MIN7 710 aa15.66■□□□□ 0.1
LHX9-205ENST00000475727 ADGRB3O60242 1522 aa15.66■□□□□ 0.1
LHX9-205ENST00000475727 TONSLQ96HA7 1378 aa15.64■□□□□ 0.09
LHX9-205ENST00000475727 ZNF142P52746 1687 aaPredicted RBP15.64■□□□□ 0.09
LHX9-205ENST00000475727 HDGFP51858 240 aaKnown RBP15.64■□□□□ 0.09
LHX9-205ENST00000475727 KDM5AP29375 1690 aaKnown RBP15.63■□□□□ 0.09
LHX9-205ENST00000475727 TMEM131LA2VDJ0 1609 aa15.63■□□□□ 0.09
LHX9-205ENST00000475727 RPGRIP1LQ68CZ1 1315 aa15.63■□□□□ 0.09
LHX9-205ENST00000475727 UBR1Q8IWV7 1749 aa15.63■□□□□ 0.09
LHX9-205ENST00000475727 NEURL4Q96JN8 1562 aa15.62■□□□□ 0.09
LHX9-205ENST00000475727 MYO5BQ9ULV0 1848 aa15.61■□□□□ 0.09
LHX9-205ENST00000475727 SPATA31E1Q6ZUB1 1445 aa15.61■□□□□ 0.09
LHX9-205ENST00000475727 EID1Q9Y6B2 187 aa15.61■□□□□ 0.09
LHX9-205ENST00000475727 PPP1R15AO75807 674 aaPredicted RBP15.6■□□□□ 0.09
LHX9-205ENST00000475727 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.6■□□□□ 0.09
LHX9-205ENST00000475727 TIMELESSQ9UNS1 1208 aa15.6■□□□□ 0.09
LHX9-205ENST00000475727 DCAF11Q8TEB1 546 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms