RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 PRDM15P57071 1507 aaPredicted RBP33.34■■■□□ 2.93
MCF2L2-209ENST00000475664 FER1L4A9Z1Z3 1794 aa33.34■■■□□ 2.93
MCF2L2-209ENST00000475664 MADDQ8WXG6 1647 aa33.33■■■□□ 2.93
MCF2L2-209ENST00000475664 UNC13BO14795 1591 aa33.33■■■□□ 2.93
MCF2L2-209ENST00000475664 GGT6Q6P531 493 aa33.32■■■□□ 2.92
MCF2L2-209ENST00000475664 FAM135AQ9P2D6 1515 aa33.29■■■□□ 2.92
MCF2L2-209ENST00000475664 SETD5Q9C0A6 1442 aa33.28■■■□□ 2.92
MCF2L2-209ENST00000475664 PPP6R1Q9UPN7 881 aa33.26■■■□□ 2.91
MCF2L2-209ENST00000475664 KDM5DQ9BY66 1539 aa33.25■■■□□ 2.91
MCF2L2-209ENST00000475664 ZC3H13Q5T200 1668 aaKnown RBP33.25■■■□□ 2.91
MCF2L2-209ENST00000475664 RIMS1Q86UR5 1692 aaKnown RBP33.25■■■□□ 2.91
MCF2L2-209ENST00000475664 VWDEQ8N2E2 1590 aa33.25■■■□□ 2.91
MCF2L2-209ENST00000475664 CLTCQ00610 1675 aaKnown RBP33.24■■■□□ 2.91
MCF2L2-209ENST00000475664 KDM4FA0A1W2PPD8 638 aa33.24■■■□□ 2.91
MCF2L2-209ENST00000475664 CEP152O94986 1710 aa33.22■■■□□ 2.91
MCF2L2-209ENST00000475664 ABCC3O15438 1527 aa33.22■■■□□ 2.91
MCF2L2-209ENST00000475664 CNTLNQ9NXG0 1405 aa33.2■■■□□ 2.91
MCF2L2-209ENST00000475664 MROH2AA6NES4 1674 aa33.2■■■□□ 2.91
MCF2L2-209ENST00000475664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.19■■■□□ 2.9
MCF2L2-209ENST00000475664 RAB3GAP2Q9H2M9 1393 aa33.19■■■□□ 2.9
MCF2L2-209ENST00000475664 IQGAP3Q86VI3 1631 aa33.18■■■□□ 2.9
MCF2L2-209ENST00000475664 KANK1Q14678 1352 aa33.18■■■□□ 2.9
MCF2L2-209ENST00000475664 WASHC2CQ9Y4E1 1318 aa33.16■■■□□ 2.9
MCF2L2-209ENST00000475664 LMTK2Q8IWU2 1503 aa33.16■■■□□ 2.9
MCF2L2-209ENST00000475664 ESF1Q9H501 851 aaKnown RBP33.15■■■□□ 2.9
MCF2L2-209ENST00000475664 CAMSAP1Q5T5Y3 1602 aa33.14■■■□□ 2.9
MCF2L2-209ENST00000475664 NUP155O75694 1391 aa33.12■■■□□ 2.89
MCF2L2-209ENST00000475664 C3P01024 1663 aa33.12■■■□□ 2.89
MCF2L2-209ENST00000475664 PTPRMP28827 1452 aa33.12■■■□□ 2.89
MCF2L2-209ENST00000475664 TET3O43151 1660 aa33.1■■■□□ 2.89
MCF2L2-209ENST00000475664 HRCP23327 699 aa33.07■■■□□ 2.88
MCF2L2-209ENST00000475664 ZMYM3Q14202 1370 aa33.07■■■□□ 2.88
MCF2L2-209ENST00000475664 EFCAB6Q5THR3 1501 aa33.07■■■□□ 2.88
MCF2L2-209ENST00000475664 ACIN1Q9UKV3 1341 aaKnown RBP33.06■■■□□ 2.88
MCF2L2-209ENST00000475664 PZPP20742 1482 aa33.05■■■□□ 2.88
MCF2L2-209ENST00000475664 TRIM52Q96A61 297 aa33.04■■■□□ 2.88
MCF2L2-209ENST00000475664 PCGF6Q9BYE7 350 aa33.04■■■□□ 2.88
MCF2L2-209ENST00000475664 ARHGAP31Q2M1Z3 1444 aa33.02■■■□□ 2.88
MCF2L2-209ENST00000475664 E9PCH4 1651 aa32.99■■■□□ 2.87
MCF2L2-209ENST00000475664 NPATQ14207 1427 aa32.99■■■□□ 2.87
MCF2L2-209ENST00000475664 CEBPAP49715 358 aaPredicted RBP32.98■■■□□ 2.87
MCF2L2-209ENST00000475664 RPRD2Q5VT52 1461 aaKnown RBP32.94■■■□□ 2.86
MCF2L2-209ENST00000475664 PREX1Q8TCU6 1659 aa32.94■■■□□ 2.86
MCF2L2-209ENST00000475664 CFAP65Q6ZU64 1925 aaKnown RBP32.93■■■□□ 2.86
MCF2L2-209ENST00000475664 PLPPR3Q6T4P5 718 aa32.91■■■□□ 2.86
MCF2L2-209ENST00000475664 SPATA31D1Q6ZQQ2 1576 aa32.91■■■□□ 2.86
MCF2L2-209ENST00000475664 SLC4A1APQ9BWU0 796 aaKnown RBP32.9■■■□□ 2.86
MCF2L2-209ENST00000475664 ERVK-7P63135 1459 aa32.9■■■□□ 2.86
MCF2L2-209ENST00000475664 FBXO31Q5XUX0 539 aaPredicted RBP32.88■■■□□ 2.85
MCF2L2-209ENST00000475664 MPHOSPH9Q99550 1183 aa32.88■■■□□ 2.85
MCF2L2-209ENST00000475664 NOS1P29475 1434 aa32.85■■■□□ 2.85
MCF2L2-209ENST00000475664 SETD1BQ9UPS6 1966 aaKnown RBP32.84■■■□□ 2.85
MCF2L2-209ENST00000475664 PKD2Q13563 968 aa32.84■■■□□ 2.85
MCF2L2-209ENST00000475664 SPHKAPQ2M3C7 1700 aa32.82■■■□□ 2.85
MCF2L2-209ENST00000475664 SYNMO15061 1565 aa32.81■■■□□ 2.84
MCF2L2-209ENST00000475664 TNRQ92752 1358 aa32.81■■■□□ 2.84
MCF2L2-209ENST00000475664 MYO3AQ8NEV4 1616 aa32.79■■■□□ 2.84
MCF2L2-209ENST00000475664 PTPRTO14522 1441 aa32.77■■■□□ 2.84
MCF2L2-209ENST00000475664 TRPM2O94759 1503 aa32.73■■■□□ 2.83
MCF2L2-209ENST00000475664 FOXD1Q16676 465 aa32.73■■■□□ 2.83
MCF2L2-209ENST00000475664 PLA2R1Q13018 1463 aa32.73■■■□□ 2.83
MCF2L2-209ENST00000475664 PIK3C2BO00750 1634 aa32.72■■■□□ 2.83
MCF2L2-209ENST00000475664 NLRP1Q9C000 1473 aa32.71■■■□□ 2.83
MCF2L2-209ENST00000475664 ZNF142P52746 1687 aaPredicted RBP32.71■■■□□ 2.83
MCF2L2-209ENST00000475664 UHRF1BP1Q6BDS2 1440 aa32.68■■■□□ 2.82
MCF2L2-209ENST00000475664 UGGT1Q9NYU2 1555 aa32.68■■■□□ 2.82
MCF2L2-209ENST00000475664 CEP170BQ9Y4F5 1589 aaPredicted RBP32.68■■■□□ 2.82
MCF2L2-209ENST00000475664 DHX57Q6P158 1386 aaKnown RBP32.68■■■□□ 2.82
MCF2L2-209ENST00000475664 AEBP2Q6ZN18 517 aaPredicted RBP32.65■■■□□ 2.82
MCF2L2-209ENST00000475664 A2ML1A8K2U0 1454 aa32.65■■■□□ 2.82
MCF2L2-209ENST00000475664 CLTCL1P53675 1640 aa32.65■■■□□ 2.82
MCF2L2-209ENST00000475664 LMTK3Q96Q04 1460 aa32.63■■■□□ 2.81
MCF2L2-209ENST00000475664 SLC52A1Q9NWF4 448 aa32.63■■■□□ 2.81
MCF2L2-209ENST00000475664 IDI1Q13907 227 aa32.61■■■□□ 2.81
MCF2L2-209ENST00000475664 ANKRD30BQ9BXX2 1392 aa32.6■■■□□ 2.81
MCF2L2-209ENST00000475664 UBR1Q8IWV7 1749 aa32.6■■■□□ 2.81
MCF2L2-209ENST00000475664 KDM5AP29375 1690 aaKnown RBP32.59■■■□□ 2.81
MCF2L2-209ENST00000475664 ADGRB3O60242 1522 aa32.57■■■□□ 2.8
MCF2L2-209ENST00000475664 TMEM131LA2VDJ0 1609 aa32.55■■■□□ 2.8
MCF2L2-209ENST00000475664 CCDC144AA2RUR9 1427 aa32.54■■■□□ 2.8
MCF2L2-209ENST00000475664 KIF1BO60333 1816 aa32.54■■■□□ 2.8
MCF2L2-209ENST00000475664 MYO5BQ9ULV0 1848 aa32.54■■■□□ 2.8
MCF2L2-209ENST00000475664 STAG3Q9UJ98 1225 aa32.44■■■□□ 2.78
MCF2L2-209ENST00000475664 THEMISQ8N1K5 641 aaPredicted RBP32.43■■■□□ 2.78
MCF2L2-209ENST00000475664 NEURL4Q96JN8 1562 aa32.43■■■□□ 2.78
MCF2L2-209ENST00000475664 HSPA2P54652 639 aa32.42■■■□□ 2.78
MCF2L2-209ENST00000475664 SPATA31E1Q6ZUB1 1445 aa32.42■■■□□ 2.78
MCF2L2-209ENST00000475664 SLIT1O75093 1534 aa32.41■■■□□ 2.78
MCF2L2-209ENST00000475664 CHGAP10645 457 aaKnown RBP32.41■■■□□ 2.78
MCF2L2-209ENST00000475664 ARHGAP23Q9P227 1491 aa32.41■■■□□ 2.78
MCF2L2-209ENST00000475664 TMEM2Q9UHN6 1383 aa32.37■■■□□ 2.77
MCF2L2-209ENST00000475664 POLR1AO95602 1720 aaPredicted RBP32.34■■■□□ 2.77
MCF2L2-209ENST00000475664 ZFYVE9O95405 1425 aa32.34■■■□□ 2.77
MCF2L2-209ENST00000475664 STRCQ7RTU9 1775 aa32.32■■■□□ 2.77
MCF2L2-209ENST00000475664 NEXMIFQ5QGS0 1516 aa32.31■■■□□ 2.76
MCF2L2-209ENST00000475664 SIN3AQ96ST3 1273 aa32.31■■■□□ 2.76
MCF2L2-209ENST00000475664 RIMS2Q9UQ26 1411 aa32.31■■■□□ 2.76
MCF2L2-209ENST00000475664 IFT172Q9UG01 1749 aa32.3■■■□□ 2.76
MCF2L2-209ENST00000475664 PPLO60437 1756 aa32.3■■■□□ 2.76
MCF2L2-209ENST00000475664 CLSPNQ9HAW4 1339 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms