RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 PRDM15P57071 1507 aaPredicted RBP22.67■■□□□ 1.22
MCF2L-224ENST00000475524 PCGF6Q9BYE7 350 aa22.67■■□□□ 1.22
MCF2L-224ENST00000475524 RAB3GAP2Q9H2M9 1393 aa22.65■■□□□ 1.22
MCF2L-224ENST00000475524 MROH1Q8NDA8 1641 aa22.65■■□□□ 1.22
MCF2L-224ENST00000475524 KDM5DQ9BY66 1539 aa22.64■■□□□ 1.21
MCF2L-224ENST00000475524 ZC3H13Q5T200 1668 aaKnown RBP22.63■■□□□ 1.21
MCF2L-224ENST00000475524 PPP6R1Q9UPN7 881 aa22.62■■□□□ 1.21
MCF2L-224ENST00000475524 VWDEQ8N2E2 1590 aa22.62■■□□□ 1.21
MCF2L-224ENST00000475524 KIF3BO15066 747 aa22.61■■□□□ 1.21
MCF2L-224ENST00000475524 IQGAP3Q86VI3 1631 aa22.6■■□□□ 1.21
MCF2L-224ENST00000475524 KANK1Q14678 1352 aa22.57■■□□□ 1.2
MCF2L-224ENST00000475524 LMTK2Q8IWU2 1503 aa22.57■■□□□ 1.2
MCF2L-224ENST00000475524 MROH2AA6NES4 1674 aa22.53■■□□□ 1.2
MCF2L-224ENST00000475524 TET3O43151 1660 aa22.53■■□□□ 1.2
MCF2L-224ENST00000475524 ADAMTSL3P82987 1691 aa22.53■■□□□ 1.2
MCF2L-224ENST00000475524 ARID4BQ4LE39 1312 aaPredicted RBP22.53■■□□□ 1.2
MCF2L-224ENST00000475524 CNTLNQ9NXG0 1405 aa22.52■■□□□ 1.2
MCF2L-224ENST00000475524 ABCC3O15438 1527 aa22.52■■□□□ 1.19
MCF2L-224ENST00000475524 CEP152O94986 1710 aa22.51■■□□□ 1.19
MCF2L-224ENST00000475524 FER1L4A9Z1Z3 1794 aa22.51■■□□□ 1.19
MCF2L-224ENST00000475524 NUP155O75694 1391 aa22.5■■□□□ 1.19
MCF2L-224ENST00000475524 PZPP20742 1482 aa22.49■■□□□ 1.19
MCF2L-224ENST00000475524 GGT6Q6P531 493 aa22.49■■□□□ 1.19
MCF2L-224ENST00000475524 CAMSAP1Q5T5Y3 1602 aa22.48■■□□□ 1.19
MCF2L-224ENST00000475524 EFCAB6Q5THR3 1501 aa22.47■■□□□ 1.19
MCF2L-224ENST00000475524 CLTCQ00610 1675 aaKnown RBP22.47■■□□□ 1.19
MCF2L-224ENST00000475524 ARHGAP31Q2M1Z3 1444 aa22.46■■□□□ 1.19
MCF2L-224ENST00000475524 TRIM52Q96A61 297 aa22.45■■□□□ 1.18
MCF2L-224ENST00000475524 RPRD2Q5VT52 1461 aaKnown RBP22.45■■□□□ 1.18
MCF2L-224ENST00000475524 MADDQ8WXG6 1647 aa22.44■■□□□ 1.18
MCF2L-224ENST00000475524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.44■■□□□ 1.184e-7■■□□□ 12.4
MCF2L-224ENST00000475524 WASHC2CQ9Y4E1 1318 aa22.44■■□□□ 1.18
MCF2L-224ENST00000475524 E9PCH4 1651 aa22.42■■□□□ 1.18
MCF2L-224ENST00000475524 MLECQ14165 292 aa22.41■■□□□ 1.18
MCF2L-224ENST00000475524 ESF1Q9H501 851 aaKnown RBP22.41■■□□□ 1.18
MCF2L-224ENST00000475524 SLC4A1APQ9BWU0 796 aaKnown RBP22.39■■□□□ 1.17
MCF2L-224ENST00000475524 RIMS1Q86UR5 1692 aaKnown RBP22.39■■□□□ 1.17
MCF2L-224ENST00000475524 MPHOSPH9Q99550 1183 aa22.38■■□□□ 1.17
MCF2L-224ENST00000475524 C3P01024 1663 aa22.36■■□□□ 1.17
MCF2L-224ENST00000475524 NPATQ14207 1427 aa22.36■■□□□ 1.17
MCF2L-224ENST00000475524 DHX57Q6P158 1386 aaKnown RBP22.36■■□□□ 1.17
MCF2L-224ENST00000475524 SPHKAPQ2M3C7 1700 aa22.34■■□□□ 1.17
MCF2L-224ENST00000475524 PREX1Q8TCU6 1659 aa22.34■■□□□ 1.17
MCF2L-224ENST00000475524 ZMYM3Q14202 1370 aa22.34■■□□□ 1.17
MCF2L-224ENST00000475524 SPATA31D1Q6ZQQ2 1576 aa22.33■■□□□ 1.16
MCF2L-224ENST00000475524 PKD2Q13563 968 aa22.31■■□□□ 1.16
MCF2L-224ENST00000475524 PTPRTO14522 1441 aa22.31■■□□□ 1.16
MCF2L-224ENST00000475524 NOS1P29475 1434 aa22.3■■□□□ 1.16
MCF2L-224ENST00000475524 ERVK-7P63135 1459 aa22.29■■□□□ 1.16
MCF2L-224ENST00000475524 TRPM2O94759 1503 aa22.29■■□□□ 1.16
MCF2L-224ENST00000475524 CLSPNQ9HAW4 1339 aa22.29■■□□□ 1.16
MCF2L-224ENST00000475524 PTPRMP28827 1452 aa22.28■■□□□ 1.16
MCF2L-224ENST00000475524 PIK3C2BO00750 1634 aa22.24■■□□□ 1.15
MCF2L-224ENST00000475524 SYNMO15061 1565 aa22.24■■□□□ 1.15
MCF2L-224ENST00000475524 ANKRD30BQ9BXX2 1392 aa22.24■■□□□ 1.15
MCF2L-224ENST00000475524 CFAP65Q6ZU64 1925 aaKnown RBP22.23■■□□□ 1.15
MCF2L-224ENST00000475524 PLA2R1Q13018 1463 aa22.22■■□□□ 1.15
MCF2L-224ENST00000475524 SETD1BQ9UPS6 1966 aaKnown RBP22.22■■□□□ 1.15
MCF2L-224ENST00000475524 KDM4FA0A1W2PPD8 638 aa22.22■■□□□ 1.15
MCF2L-224ENST00000475524 KDM5AP29375 1690 aaKnown RBP22.2■■□□□ 1.15
MCF2L-224ENST00000475524 NEURL4Q96JN8 1562 aa22.2■■□□□ 1.14
MCF2L-224ENST00000475524 NLRP1Q9C000 1473 aa22.19■■□□□ 1.14
MCF2L-224ENST00000475524 TNRQ92752 1358 aa22.18■■□□□ 1.14
MCF2L-224ENST00000475524 SLC52A1Q9NWF4 448 aa22.18■■□□□ 1.14
MCF2L-224ENST00000475524 CLTCL1P53675 1640 aa22.17■■□□□ 1.14
MCF2L-224ENST00000475524 CCDC144AA2RUR9 1427 aa22.17■■□□□ 1.14
MCF2L-224ENST00000475524 MYO3AQ8NEV4 1616 aa22.17■■□□□ 1.14
MCF2L-224ENST00000475524 KIF1BO60333 1816 aa22.16■■□□□ 1.14
MCF2L-224ENST00000475524 ZNF142P52746 1687 aaPredicted RBP22.16■■□□□ 1.14
MCF2L-224ENST00000475524 FOXD1Q16676 465 aa22.15■■□□□ 1.14
MCF2L-224ENST00000475524 FBXO31Q5XUX0 539 aaPredicted RBP22.15■■□□□ 1.14
MCF2L-224ENST00000475524 CCER1Q8TC90 406 aaPredicted RBP22.14■■□□□ 1.13
MCF2L-224ENST00000475524 CEBPAP49715 358 aaPredicted RBP22.13■■□□□ 1.13
MCF2L-224ENST00000475524 UGGT1Q9NYU2 1555 aa22.11■■□□□ 1.13
MCF2L-224ENST00000475524 ADGRB3O60242 1522 aa22.11■■□□□ 1.13
MCF2L-224ENST00000475524 TMEM131LA2VDJ0 1609 aa22.09■■□□□ 1.13
MCF2L-224ENST00000475524 A2ML1A8K2U0 1454 aa22.09■■□□□ 1.13
MCF2L-224ENST00000475524 CEP170BQ9Y4F5 1589 aaPredicted RBP22.08■■□□□ 1.13
MCF2L-224ENST00000475524 UBR1Q8IWV7 1749 aa22.08■■□□□ 1.12
MCF2L-224ENST00000475524 IDI1Q13907 227 aa22.06■■□□□ 1.12
MCF2L-224ENST00000475524 UHRF1BP1Q6BDS2 1440 aa22.06■■□□□ 1.12
MCF2L-224ENST00000475524 SPATA31E1Q6ZUB1 1445 aa22.06■■□□□ 1.12
MCF2L-224ENST00000475524 MYO5BQ9ULV0 1848 aa22.03■■□□□ 1.12
MCF2L-224ENST00000475524 TIMELESSQ9UNS1 1208 aa22.01■■□□□ 1.11
MCF2L-224ENST00000475524 IFT172Q9UG01 1749 aa22■■□□□ 1.11
MCF2L-224ENST00000475524 SLIT1O75093 1534 aa21.98■■□□□ 1.11
MCF2L-224ENST00000475524 PLPPR3Q6T4P5 718 aa21.98■■□□□ 1.11
MCF2L-224ENST00000475524 SIN3AQ96ST3 1273 aa21.98■■□□□ 1.11
MCF2L-224ENST00000475524 PPLO60437 1756 aa21.97■■□□□ 1.11
MCF2L-224ENST00000475524 STAC3Q96MF2 364 aa21.97■■□□□ 1.11
MCF2L-224ENST00000475524 RPGRIP1LQ68CZ1 1315 aa21.97■■□□□ 1.11
MCF2L-224ENST00000475524 ARHGAP23Q9P227 1491 aa21.96■■□□□ 1.11
MCF2L-224ENST00000475524 THEMISQ8N1K5 641 aaPredicted RBP21.95■■□□□ 1.1
MCF2L-224ENST00000475524 STAG3Q9UJ98 1225 aa21.95■■□□□ 1.1
MCF2L-224ENST00000475524 NEXMIFQ5QGS0 1516 aa21.95■■□□□ 1.1
MCF2L-224ENST00000475524 TONSLQ96HA7 1378 aa21.93■■□□□ 1.1
MCF2L-224ENST00000475524 LMTK3Q96Q04 1460 aa21.93■■□□□ 1.1
MCF2L-224ENST00000475524 MYOM2P54296 1465 aa21.92■■□□□ 1.1
MCF2L-224ENST00000475524 ZFYVE9O95405 1425 aa21.92■■□□□ 1.1
MCF2L-224ENST00000475524 TMEM2Q9UHN6 1383 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms