RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 FLIIQ13045 1269 aa10.42□□□□□ -0.74
SDHB-205ENST00000475506 RBM33Q96EV2 1170 aaKnown RBP10.42□□□□□ -0.74
SDHB-205ENST00000475506 ARID3CA6NKF2 412 aa10.41□□□□□ -0.74
SDHB-205ENST00000475506 MDM2Q00987 491 aaPredicted RBP10.41□□□□□ -0.74
SDHB-205ENST00000475506 SLC39A7Q92504 469 aa10.41□□□□□ -0.74
SDHB-205ENST00000475506 EPAS1Q99814 870 aa10.41□□□□□ -0.74
SDHB-205ENST00000475506 KDM4FA0A1W2PPD8 638 aa10.39□□□□□ -0.75
SDHB-205ENST00000475506 FAM161AQ3B820 660 aa10.39□□□□□ -0.75
SDHB-205ENST00000475506 SLAIN1Q8ND83 568 aa10.39□□□□□ -0.75
SDHB-205ENST00000475506 PCMTD1Q96MG8 357 aaPredicted RBP10.39□□□□□ -0.75
SDHB-205ENST00000475506 DCBLD2Q96PD2 775 aa10.39□□□□□ -0.75
SDHB-205ENST00000475506 ARID3AQ99856 593 aa10.39□□□□□ -0.75
SDHB-205ENST00000475506 C7P10643 843 aa10.38□□□□□ -0.75
SDHB-205ENST00000475506 CLCN1P35523 988 aa10.38□□□□□ -0.75
SDHB-205ENST00000475506 SH3D19Q5HYK7 790 aa10.38□□□□□ -0.75
SDHB-205ENST00000475506 C3orf67Q6ZVT6 689 aa10.38□□□□□ -0.75
SDHB-205ENST00000475506 GPCPD1Q9NPB8 672 aa10.38□□□□□ -0.75
SDHB-205ENST00000475506 NLRP7Q8WX94 980 aa10.37□□□□□ -0.75
SDHB-205ENST00000475506 METRNQ9UJH8 293 aa10.37□□□□□ -0.75
SDHB-205ENST00000475506 PCDHGA4Q9Y5G9 962 aa10.37□□□□□ -0.75
SDHB-205ENST00000475506 SSTR3P32745 418 aaPredicted RBP10.36□□□□□ -0.75
SDHB-205ENST00000475506 CLUAP1Q96AJ1 413 aa10.36□□□□□ -0.75
SDHB-205ENST00000475506 APBB1O00213 710 aa10.35□□□□□ -0.75
SDHB-205ENST00000475506 POTEIP0CG38 1075 aa10.35□□□□□ -0.75
SDHB-205ENST00000475506 TYW1BQ6NUM6 668 aa10.35□□□□□ -0.75
SDHB-205ENST00000475506 MCM6Q14566 821 aa10.33□□□□□ -0.76
SDHB-205ENST00000475506 METTL3Q86U44 580 aaKnown RBP10.33□□□□□ -0.76
SDHB-205ENST00000475506 PROCA1Q8NCQ7 364 aaPredicted RBP10.33□□□□□ -0.76
SDHB-205ENST00000475506 BEGAINQ9BUH8 593 aa10.33□□□□□ -0.76
SDHB-205ENST00000475506 FAM217BQ9NTX9 383 aaPredicted RBP10.33□□□□□ -0.76
SDHB-205ENST00000475506 A6NJR5 290 aa10.32□□□□□ -0.76
SDHB-205ENST00000475506 SKIV2LQ15477 1246 aaKnown RBP10.32□□□□□ -0.76
SDHB-205ENST00000475506 JPH4Q96JJ6 628 aa10.32□□□□□ -0.76
SDHB-205ENST00000475506 PADI6Q6TGC4 694 aa10.31□□□□□ -0.76
SDHB-205ENST00000475506 TRAK2O60296 914 aa10.3□□□□□ -0.76
SDHB-205ENST00000475506 FOSBP53539 338 aa10.3□□□□□ -0.76
SDHB-205ENST00000475506 FBXW7Q969H0 707 aa10.3□□□□□ -0.76
SDHB-205ENST00000475506 ADGRG1Q9Y653 693 aa10.3□□□□□ -0.76
SDHB-205ENST00000475506 PXYLP1Q8TE99 480 aa10.29□□□□□ -0.76
SDHB-205ENST00000475506 C6orf132Q5T0Z8 1188 aa10.28□□□□□ -0.76
SDHB-205ENST00000475506 TTC13Q8NBP0 860 aa10.28□□□□□ -0.76
SDHB-205ENST00000475506 POLR3EQ9NVU0 708 aa10.28□□□□□ -0.76
SDHB-205ENST00000475506 OATP04181 439 aa10.27□□□□□ -0.77
SDHB-205ENST00000475506 MYSM1Q5VVJ2 828 aa10.26□□□□□ -0.77
SDHB-205ENST00000475506 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.26□□□□□ -0.77
SDHB-205ENST00000475506 PODXL2Q9NZ53 605 aa10.26□□□□□ -0.77
SDHB-205ENST00000475506 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.26□□□□□ -0.77
SDHB-205ENST00000475506 TRIM26Q12899 539 aaPredicted RBP10.25□□□□□ -0.77
SDHB-205ENST00000475506 FBXO31Q5XUX0 539 aaPredicted RBP10.25□□□□□ -0.77
SDHB-205ENST00000475506 POM121Q96HA1 1249 aa10.25□□□□□ -0.77
SDHB-205ENST00000475506 ADAM33Q9BZ11 813 aa10.24□□□□□ -0.77
SDHB-205ENST00000475506 HRCP23327 699 aa10.23□□□□□ -0.77
SDHB-205ENST00000475506 CCDC82Q8N4S0 544 aa10.23□□□□□ -0.77
SDHB-205ENST00000475506 CERKQ8TCT0 537 aa10.23□□□□□ -0.77
SDHB-205ENST00000475506 KHSRPQ92945 711 aaKnown RBP eCLIP10.23□□□□□ -0.77
SDHB-205ENST00000475506 ZDHHC16Q969W1 377 aa10.23□□□□□ -0.77
SDHB-205ENST00000475506 ZNF454Q8N9F8 522 aa10.22□□□□□ -0.77
SDHB-205ENST00000475506 FNBP4Q8N3X1 1017 aaPredicted RBP10.21□□□□□ -0.77
SDHB-205ENST00000475506 RBM27Q9P2N5 1060 aaKnown RBP10.21□□□□□ -0.77
SDHB-205ENST00000475506 FAM198AQ9UFP1 575 aa10.21□□□□□ -0.77
SDHB-205ENST00000475506 NUDT7P0C024 238 aa10.2□□□□□ -0.78
SDHB-205ENST00000475506 TBC1D2Q9BYX2 928 aa10.2□□□□□ -0.78
SDHB-205ENST00000475506 CLK2P49760 499 aaKnown RBP10.19□□□□□ -0.78
SDHB-205ENST00000475506 PRSS12P56730 875 aa10.19□□□□□ -0.78
SDHB-205ENST00000475506 PROSER2Q86WR7 435 aaPredicted RBP10.19□□□□□ -0.78
SDHB-205ENST00000475506 HOXB3P14651 431 aaPredicted RBP10.18□□□□□ -0.78
SDHB-205ENST00000475506 ARSIQ5FYB1 569 aa10.18□□□□□ -0.78
SDHB-205ENST00000475506 CDCA7LQ96GN5 454 aa10.18□□□□□ -0.78
SDHB-205ENST00000475506 LIMD1Q9UGP4 676 aa10.18□□□□□ -0.78
SDHB-205ENST00000475506 ZNF777Q9ULD5 760 aaPredicted RBP10.18□□□□□ -0.78
SDHB-205ENST00000475506 ATP1B4Q9UN42 357 aaPredicted RBP10.18□□□□□ -0.78
SDHB-205ENST00000475506 SNRKQ9NRH2 765 aa10.17□□□□□ -0.78
SDHB-205ENST00000475506 C3orf80F5H4A9 247 aa10.16□□□□□ -0.78
SDHB-205ENST00000475506 RFC5P40937 340 aa10.16□□□□□ -0.78
SDHB-205ENST00000475506 COG6Q9Y2V7 657 aa10.16□□□□□ -0.78
SDHB-205ENST00000475506 SPDYE5A6NIY4 337 aa10.15□□□□□ -0.78
SDHB-205ENST00000475506 COL9A1P20849 921 aa10.15□□□□□ -0.78
SDHB-205ENST00000475506 POTEJP0CG39 1038 aa10.14□□□□□ -0.79
SDHB-205ENST00000475506 GPR153Q6NV75 609 aa10.14□□□□□ -0.79
SDHB-205ENST00000475506 RBM46Q8TBY0 533 aaKnown RBP10.14□□□□□ -0.79
SDHB-205ENST00000475506 SPIRE2Q8WWL2 714 aa10.14□□□□□ -0.79
SDHB-205ENST00000475506 EYA1Q99502 592 aa10.14□□□□□ -0.79
SDHB-205ENST00000475506 RCCD1A6NED2 376 aa10.13□□□□□ -0.79
SDHB-205ENST00000475506 PPP2R2DQ66LE6 453 aa10.12□□□□□ -0.79
SDHB-205ENST00000475506 BANK1Q8NDB2 785 aa10.12□□□□□ -0.79
SDHB-205ENST00000475506 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.11□□□□□ -0.79
SDHB-205ENST00000475506 RAD21O60216 631 aa10.11□□□□□ -0.79
SDHB-205ENST00000475506 CD46P15529 392 aa10.11□□□□□ -0.79
SDHB-205ENST00000475506 RIC3Q7Z5B4 369 aa10.11□□□□□ -0.79
SDHB-205ENST00000475506 TSKSQ9UJT2 592 aa10.11□□□□□ -0.79
SDHB-205ENST00000475506 DIXDC1Q155Q3 683 aa10.09□□□□□ -0.79
SDHB-205ENST00000475506 DOK7Q18PE1 504 aa10.09□□□□□ -0.79
SDHB-205ENST00000475506 LHX6Q9UPM6 363 aa10.09□□□□□ -0.79
SDHB-205ENST00000475506 SPTLC1O15269 473 aa10.08□□□□□ -0.8
SDHB-205ENST00000475506 MTMR14Q8NCE2 650 aa10.08□□□□□ -0.8
SDHB-205ENST00000475506 TMEM259Q4ZIN3 620 aa10.07□□□□□ -0.8
SDHB-205ENST00000475506 RSBN1LQ6PCB5 846 aaPredicted RBP10.07□□□□□ -0.8
SDHB-205ENST00000475506 MOXD2PA6NHM9 499 aa10.06□□□□□ -0.8
SDHB-205ENST00000475506 TUSC1Q2TAM9 212 aa10.06□□□□□ -0.8
SDHB-205ENST00000475506 NUDT18Q6ZVK8 323 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms