RNA–Protein interactions for RNA: ENST00000475432.6

HIF3A-207, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-207ENST00000475432 FAM135AQ9P2D6 1515 aa26.24■■□□□ 1.79
HIF3A-207ENST00000475432 FRMPD1Q5SYB0 1578 aa26.22■■□□□ 1.79
HIF3A-207ENST00000475432 TIMELESSQ9UNS1 1208 aa26.21■■□□□ 1.79
HIF3A-207ENST00000475432 A2MP01023 1474 aa26.21■■□□□ 1.79
HIF3A-207ENST00000475432 KIF3BO15066 747 aa26.18■■□□□ 1.78
HIF3A-207ENST00000475432 ABCA6Q8N139 1617 aa26.18■■□□□ 1.78
HIF3A-207ENST00000475432 EIF2AK4Q9P2K8 1649 aaKnown RBP26.17■■□□□ 1.78
HIF3A-207ENST00000475432 IQGAP3Q86VI3 1631 aa26.17■■□□□ 1.78
HIF3A-207ENST00000475432 ZMYM4Q5VZL5 1548 aa26.16■■□□□ 1.78
HIF3A-207ENST00000475432 DEPDC5O75140 1603 aa26.14■■□□□ 1.78
HIF3A-207ENST00000475432 YEATS2Q9ULM3 1422 aa26.14■■□□□ 1.78
HIF3A-207ENST00000475432 TONSLQ96HA7 1378 aa26.14■■□□□ 1.77
HIF3A-207ENST00000475432 DIP2CQ9Y2E4 1556 aa26.14■■□□□ 1.77
HIF3A-207ENST00000475432 COL17A1Q9UMD9 1497 aaPredicted RBP26.13■■□□□ 1.77
HIF3A-207ENST00000475432 TRHP20396 242 aaPredicted RBP26.1■■□□□ 1.77
HIF3A-207ENST00000475432 RPRD2Q5VT52 1461 aaKnown RBP26.1■■□□□ 1.77
HIF3A-207ENST00000475432 KANK1Q14678 1352 aa26.09■■□□□ 1.77
HIF3A-207ENST00000475432 PRDM15P57071 1507 aaPredicted RBP26.08■■□□□ 1.77
HIF3A-207ENST00000475432 MROH1Q8NDA8 1641 aa26.07■■□□□ 1.76
HIF3A-207ENST00000475432 VWDEQ8N2E2 1590 aa26.07■■□□□ 1.76
HIF3A-207ENST00000475432 PPP1R15AO75807 674 aaPredicted RBP26.04■■□□□ 1.76
HIF3A-207ENST00000475432 RNF17Q9BXT8 1623 aaKnown RBP26.04■■□□□ 1.76
HIF3A-207ENST00000475432 BCORL1Q5H9F3 1711 aa26.03■■□□□ 1.76
HIF3A-207ENST00000475432 ATP10AO60312 1499 aa26.02■■□□□ 1.76
HIF3A-207ENST00000475432 GGT6Q6P531 493 aa26■■□□□ 1.75
HIF3A-207ENST00000475432 PLA2R1Q13018 1463 aa25.99■■□□□ 1.75
HIF3A-207ENST00000475432 L3MBTL2Q969R5 705 aa25.97■■□□□ 1.75
HIF3A-207ENST00000475432 TET3O43151 1660 aa25.97■■□□□ 1.75
HIF3A-207ENST00000475432 LMTK2Q8IWU2 1503 aa25.96■■□□□ 1.75
HIF3A-207ENST00000475432 REREQ9P2R6 1566 aa25.94■■□□□ 1.74
HIF3A-207ENST00000475432 E9PCH4 1651 aa25.94■■□□□ 1.74
HIF3A-207ENST00000475432 CCDC144AA2RUR9 1427 aa25.94■■□□□ 1.74
HIF3A-207ENST00000475432 ARHGEF40Q8TER5 1519 aa25.93■■□□□ 1.74
HIF3A-207ENST00000475432 WASHC2CQ9Y4E1 1318 aa25.91■■□□□ 1.74
HIF3A-207ENST00000475432 EFCAB6Q5THR3 1501 aa25.9■■□□□ 1.74
HIF3A-207ENST00000475432 PTPRTO14522 1441 aa25.89■■□□□ 1.74
HIF3A-207ENST00000475432 AGLP35573 1532 aa25.89■■□□□ 1.73
HIF3A-207ENST00000475432 ABCC3O15438 1527 aa25.88■■□□□ 1.73
HIF3A-207ENST00000475432 ZNF316A6NFI3 1004 aaPredicted RBP25.87■■□□□ 1.73
HIF3A-207ENST00000475432 CEP152O94986 1710 aa25.87■■□□□ 1.73
HIF3A-207ENST00000475432 TRPM2O94759 1503 aa25.85■■□□□ 1.73
HIF3A-207ENST00000475432 NPATQ14207 1427 aa25.82■■□□□ 1.72
HIF3A-207ENST00000475432 SPHKAPQ2M3C7 1700 aa25.81■■□□□ 1.72
HIF3A-207ENST00000475432 SIGLEC1Q9BZZ2 1709 aa25.81■■□□□ 1.72
HIF3A-207ENST00000475432 ZC3H13Q5T200 1668 aaKnown RBP25.78■■□□□ 1.72
HIF3A-207ENST00000475432 CAMSAP1Q5T5Y3 1602 aa25.78■■□□□ 1.72
HIF3A-207ENST00000475432 PPP6R1Q9UPN7 881 aa25.78■■□□□ 1.72
HIF3A-207ENST00000475432 NBPF8Q3BBV2 869 aa25.76■■□□□ 1.72
HIF3A-207ENST00000475432 ARHGAP31Q2M1Z3 1444 aa25.76■■□□□ 1.71
HIF3A-207ENST00000475432 RGL3Q3MIN7 710 aa25.75■■□□□ 1.71
HIF3A-207ENST00000475432 CLTCL1P53675 1640 aa25.74■■□□□ 1.71
HIF3A-207ENST00000475432 DCAF11Q8TEB1 546 aa25.74■■□□□ 1.71
HIF3A-207ENST00000475432 SPATA31E1Q6ZUB1 1445 aa25.73■■□□□ 1.71
HIF3A-207ENST00000475432 MLECQ14165 292 aa25.72■■□□□ 1.71
HIF3A-207ENST00000475432 CNTLNQ9NXG0 1405 aa25.71■■□□□ 1.71
HIF3A-207ENST00000475432 UGGT1Q9NYU2 1555 aa25.7■■□□□ 1.71
HIF3A-207ENST00000475432 KDM2AQ9Y2K7 1162 aa25.7■■□□□ 1.7
HIF3A-207ENST00000475432 UHRF1BP1Q6BDS2 1440 aa25.7■■□□□ 1.7
HIF3A-207ENST00000475432 ARID4BQ4LE39 1312 aaPredicted RBP25.69■■□□□ 1.7
HIF3A-207ENST00000475432 NOS1P29475 1434 aa25.69■■□□□ 1.7
HIF3A-207ENST00000475432 ZNF326Q5BKZ1 582 aaKnown RBP25.69■■□□□ 1.7
HIF3A-207ENST00000475432 NEURL4Q96JN8 1562 aa25.63■■□□□ 1.69
HIF3A-207ENST00000475432 CLTCQ00610 1675 aaKnown RBP25.61■■□□□ 1.69
HIF3A-207ENST00000475432 SYNMO15061 1565 aa25.61■■□□□ 1.69
HIF3A-207ENST00000475432 PRAG1Q86YV5 1406 aa25.6■■□□□ 1.69
HIF3A-207ENST00000475432 ESF1Q9H501 851 aaKnown RBP25.6■■□□□ 1.69
HIF3A-207ENST00000475432 CFAP65Q6ZU64 1925 aaKnown RBP25.58■■□□□ 1.69
HIF3A-207ENST00000475432 FBXO31Q5XUX0 539 aaPredicted RBP25.58■■□□□ 1.69
HIF3A-207ENST00000475432 HIRIP3Q9BW71 556 aaPredicted RBP25.58■■□□□ 1.69
HIF3A-207ENST00000475432 RALGAPBQ86X10 1494 aa25.58■■□□□ 1.69
HIF3A-207ENST00000475432 PREX1Q8TCU6 1659 aa25.56■■□□□ 1.68
HIF3A-207ENST00000475432 ERVK-7P63135 1459 aa25.56■■□□□ 1.68
HIF3A-207ENST00000475432 EIF4G2P78344 907 aaKnown RBP eCLIP25.56■■□□□ 1.68
HIF3A-207ENST00000475432 ADGRB3O60242 1522 aa25.56■■□□□ 1.68
HIF3A-207ENST00000475432 PIK3C2BO00750 1634 aa25.56■■□□□ 1.68
HIF3A-207ENST00000475432 DIEXFQ68CQ4 756 aaKnown RBP25.56■■□□□ 1.68
HIF3A-207ENST00000475432 STAC3Q96MF2 364 aa25.56■■□□□ 1.68
HIF3A-207ENST00000475432 SLC52A1Q9NWF4 448 aa25.56■■□□□ 1.68
HIF3A-207ENST00000475432 KIF1BO60333 1816 aa25.55■■□□□ 1.68
HIF3A-207ENST00000475432 HSPA5P11021 654 aaKnown RBP25.54■■□□□ 1.68
HIF3A-207ENST00000475432 ZMYM3Q14202 1370 aa25.54■■□□□ 1.68
HIF3A-207ENST00000475432 CHGAP10645 457 aaKnown RBP25.54■■□□□ 1.68
HIF3A-207ENST00000475432 IDI1Q13907 227 aa25.53■■□□□ 1.68
HIF3A-207ENST00000475432 MROH2AA6NES4 1674 aa25.52■■□□□ 1.68
HIF3A-207ENST00000475432 SPATA31D1Q6ZQQ2 1576 aa25.5■■□□□ 1.67
HIF3A-207ENST00000475432 ROCK2O75116 1388 aaKnown RBP25.48■■□□□ 1.67
HIF3A-207ENST00000475432 CARD11Q9BXL7 1154 aa25.48■■□□□ 1.67
HIF3A-207ENST00000475432 TRPM1Q7Z4N2 1603 aa25.48■■□□□ 1.67
HIF3A-207ENST00000475432 MADDQ8WXG6 1647 aa25.47■■□□□ 1.67
HIF3A-207ENST00000475432 MYOM2P54296 1465 aa25.47■■□□□ 1.67
HIF3A-207ENST00000475432 USP47Q96K76 1375 aa25.46■■□□□ 1.67
HIF3A-207ENST00000475432 RPGRIP1LQ68CZ1 1315 aa25.45■■□□□ 1.67
HIF3A-207ENST00000475432 NBPF1Q3BBV0 1214 aa25.44■■□□□ 1.66
HIF3A-207ENST00000475432 GPRASP1Q5JY77 1395 aa25.44■■□□□ 1.66
HIF3A-207ENST00000475432 ADGRF5Q8IZF2 1346 aa25.42■■□□□ 1.66
HIF3A-207ENST00000475432 IFT172Q9UG01 1749 aa25.41■■□□□ 1.66
HIF3A-207ENST00000475432 NRXN1Q9ULB1 1477 aa25.4■■□□□ 1.66
HIF3A-207ENST00000475432 TMEM131LA2VDJ0 1609 aa25.39■■□□□ 1.66
HIF3A-207ENST00000475432 TNRQ92752 1358 aa25.37■■□□□ 1.65
HIF3A-207ENST00000475432 PPLO60437 1756 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms