RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 SHANK2Q9UPX8 1470 aa29.27■■■□□ 2.28
RNF220-212ENST00000475378 MTUS2Q5JR59 1369 aa29.26■■■□□ 2.27
RNF220-212ENST00000475378 DHX29Q7Z478 1369 aaKnown RBP29.26■■■□□ 2.27
RNF220-212ENST00000475378 TNRQ92752 1358 aa29.25■■■□□ 2.27
RNF220-212ENST00000475378 FAM135AQ9P2D6 1515 aa29.24■■■□□ 2.27
RNF220-212ENST00000475378 PZPP20742 1482 aa29.23■■■□□ 2.27
RNF220-212ENST00000475378 VWDEQ8N2E2 1590 aa29.23■■■□□ 2.27
RNF220-212ENST00000475378 TOM1O60784 492 aa29.22■■■□□ 2.27
RNF220-212ENST00000475378 PIP4K2BP78356 416 aa29.22■■■□□ 2.27
RNF220-212ENST00000475378 FBXO31Q5XUX0 539 aaPredicted RBP29.22■■■□□ 2.27
RNF220-212ENST00000475378 SCAF1Q9H7N4 1312 aaKnown RBP29.21■■■□□ 2.27
RNF220-212ENST00000475378 KDM5DQ9BY66 1539 aa29.21■■■□□ 2.27
RNF220-212ENST00000475378 ALKQ9UM73 1620 aa29.21■■■□□ 2.27
RNF220-212ENST00000475378 EHBP1L1Q8N3D4 1523 aa29.19■■■□□ 2.26
RNF220-212ENST00000475378 DEPDC5O75140 1603 aa29.17■■■□□ 2.26
RNF220-212ENST00000475378 MED14O60244 1454 aa29.16■■■□□ 2.26
RNF220-212ENST00000475378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.15■■■□□ 2.26
RNF220-212ENST00000475378 CEP162Q5TB80 1403 aa29.14■■■□□ 2.26
RNF220-212ENST00000475378 KIF3BO15066 747 aa29.14■■■□□ 2.26
RNF220-212ENST00000475378 ANKLE2Q86XL3 938 aa29.13■■■□□ 2.25
RNF220-212ENST00000475378 CCDC141Q6ZP82 1450 aa29.12■■■□□ 2.25
RNF220-212ENST00000475378 NLRP1Q9C000 1473 aa29.12■■■□□ 2.25
RNF220-212ENST00000475378 UGGT1Q9NYU2 1555 aa29.12■■■□□ 2.25
RNF220-212ENST00000475378 MIA2Q96PC5 1412 aa29.11■■■□□ 2.25
RNF220-212ENST00000475378 STRCP1A6NGW2 1772 aa29.11■■■□□ 2.25
RNF220-212ENST00000475378 NPHP4O75161 1426 aaPredicted RBP29.11■■■□□ 2.25
RNF220-212ENST00000475378 IQGAP1P46940 1657 aa29.1■■■□□ 2.25
RNF220-212ENST00000475378 THEMISQ8N1K5 641 aaPredicted RBP29.09■■■□□ 2.25
RNF220-212ENST00000475378 WASHC2CQ9Y4E1 1318 aa29.08■■■□□ 2.25
RNF220-212ENST00000475378 CAMSAP2Q08AD1 1489 aa29.06■■■□□ 2.24
RNF220-212ENST00000475378 RSPH4AQ5TD94 716 aa29.01■■■□□ 2.23
RNF220-212ENST00000475378 RNF17Q9BXT8 1623 aaKnown RBP29.01■■■□□ 2.23
RNF220-212ENST00000475378 SYNMO15061 1565 aa29.01■■■□□ 2.23
RNF220-212ENST00000475378 ARHGEF5Q12774 1597 aa29.01■■■□□ 2.23
RNF220-212ENST00000475378 LRRC7Q96NW7 1537 aa29■■■□□ 2.23
RNF220-212ENST00000475378 NCOA2Q15596 1464 aa28.99■■■□□ 2.23
RNF220-212ENST00000475378 PHF23Q9BUL5 403 aaPredicted RBP28.99■■■□□ 2.23
RNF220-212ENST00000475378 ZC3H13Q5T200 1668 aaKnown RBP28.99■■■□□ 2.23
RNF220-212ENST00000475378 ABCC3O15438 1527 aa28.95■■■□□ 2.23
RNF220-212ENST00000475378 CFAP65Q6ZU64 1925 aaKnown RBP28.92■■■□□ 2.22
RNF220-212ENST00000475378 UBR1Q8IWV7 1749 aa28.92■■■□□ 2.22
RNF220-212ENST00000475378 ERVK-7P63135 1459 aa28.91■■■□□ 2.22
RNF220-212ENST00000475378 MROH1Q8NDA8 1641 aa28.9■■■□□ 2.22
RNF220-212ENST00000475378 EIF2AK4Q9P2K8 1649 aaKnown RBP28.9■■■□□ 2.22
RNF220-212ENST00000475378 MAST1Q9Y2H9 1570 aa28.89■■■□□ 2.22
RNF220-212ENST00000475378 XIRP1Q702N8 1843 aaKnown RBP28.89■■■□□ 2.22
RNF220-212ENST00000475378 CEP152O94986 1710 aa28.88■■■□□ 2.21
RNF220-212ENST00000475378 TSPY4P0CV99 314 aa28.86■■■□□ 2.21
RNF220-212ENST00000475378 TSPY10P0CW01 314 aa28.86■■■□□ 2.21
RNF220-212ENST00000475378 SENP3Q9H4L4 574 aaPredicted RBP28.84■■■□□ 2.21
RNF220-212ENST00000475378 RGS17Q9UGC6 210 aaPredicted RBP28.82■■■□□ 2.2
RNF220-212ENST00000475378 SCAF11Q99590 1463 aaKnown RBP28.82■■■□□ 2.2
RNF220-212ENST00000475378 ARHGAP23Q9P227 1491 aa28.81■■■□□ 2.2
RNF220-212ENST00000475378 SLIT1O75093 1534 aa28.79■■■□□ 2.2
RNF220-212ENST00000475378 LTKP29376 864 aa28.76■■■□□ 2.19
RNF220-212ENST00000475378 LRRC9Q6ZRR7 1453 aa28.71■■■□□ 2.19
RNF220-212ENST00000475378 ARHGAP31Q2M1Z3 1444 aa28.7■■■□□ 2.19
RNF220-212ENST00000475378 DUOX2Q9NRD8 1548 aa28.7■■■□□ 2.19
RNF220-212ENST00000475378 TXNDC2Q86VQ3 553 aa28.7■■■□□ 2.18
RNF220-212ENST00000475378 PRDM15P57071 1507 aaPredicted RBP28.69■■■□□ 2.18
RNF220-212ENST00000475378 PIK3C2BO00750 1634 aa28.68■■■□□ 2.18
RNF220-212ENST00000475378 FAM135BQ49AJ0 1406 aa28.68■■■□□ 2.18
RNF220-212ENST00000475378 KDM5AP29375 1690 aaKnown RBP28.63■■■□□ 2.17
RNF220-212ENST00000475378 TMEM2Q9UHN6 1383 aa28.61■■■□□ 2.17
RNF220-212ENST00000475378 ROBO1Q9Y6N7 1651 aa28.61■■■□□ 2.17
RNF220-212ENST00000475378 MYOM3Q5VTT5 1437 aa28.6■■■□□ 2.17
RNF220-212ENST00000475378 EID1Q9Y6B2 187 aa28.6■■■□□ 2.17
RNF220-212ENST00000475378 CROCC2H7BZ55 1655 aa28.6■■■□□ 2.17
RNF220-212ENST00000475378 POTEAQ6S8J7 498 aa28.59■■■□□ 2.17
RNF220-212ENST00000475378 MAP3K1Q13233 1512 aa28.59■■■□□ 2.17
RNF220-212ENST00000475378 TMEM94Q12767 1356 aa28.58■■■□□ 2.17
RNF220-212ENST00000475378 ERBINQ96RT1 1412 aa28.58■■■□□ 2.17
RNF220-212ENST00000475378 TET3O43151 1660 aa28.57■■■□□ 2.16
RNF220-212ENST00000475378 VPS8Q8N3P4 1428 aa28.56■■■□□ 2.16
RNF220-212ENST00000475378 KIF15Q9NS87 1388 aa28.55■■■□□ 2.16
RNF220-212ENST00000475378 EFCAB6Q5THR3 1501 aa28.54■■■□□ 2.16
RNF220-212ENST00000475378 KANK4Q5T7N3 995 aaPredicted RBP28.54■■■□□ 2.16
RNF220-212ENST00000475378 KCNA6P17658 529 aa28.52■■■□□ 2.16
RNF220-212ENST00000475378 NWD1Q149M9 1564 aa28.51■■■□□ 2.15
RNF220-212ENST00000475378 ABCC5O15440 1437 aa28.51■■■□□ 2.15
RNF220-212ENST00000475378 LMTK2Q8IWU2 1503 aa28.48■■■□□ 2.15
RNF220-212ENST00000475378 SETD1AO15047 1707 aaKnown RBP28.48■■■□□ 2.15
RNF220-212ENST00000475378 IDI1Q13907 227 aa28.47■■■□□ 2.15
RNF220-212ENST00000475378 RRP7BPQ9NSQ0 103 aa28.47■■■□□ 2.15
RNF220-212ENST00000475378 NKTRP30414 1462 aaKnown RBP28.46■■■□□ 2.15
RNF220-212ENST00000475378 STAG3Q9UJ98 1225 aa28.46■■■□□ 2.15
RNF220-212ENST00000475378 PROSER2Q86WR7 435 aaPredicted RBP28.45■■■□□ 2.14
RNF220-212ENST00000475378 RBM33Q96EV2 1170 aaKnown RBP28.45■■■□□ 2.14
RNF220-212ENST00000475378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.45■■■□□ 2.145e-9■■□□□ 13.5
RNF220-212ENST00000475378 PHLPP1O60346 1717 aa28.45■■■□□ 2.14
RNF220-212ENST00000475378 PTPN23Q9H3S7 1636 aa28.44■■■□□ 2.14
RNF220-212ENST00000475378 SLC26A8Q96RN1 970 aa28.44■■■□□ 2.14
RNF220-212ENST00000475378 ADGRB3O60242 1522 aa28.43■■■□□ 2.14
RNF220-212ENST00000475378 KANK1Q14678 1352 aa28.42■■■□□ 2.14
RNF220-212ENST00000475378 NOS1P29475 1434 aa28.42■■■□□ 2.14
RNF220-212ENST00000475378 CHD2O14647 1828 aaKnown RBP28.4■■■□□ 2.14
RNF220-212ENST00000475378 DAPK1P53355 1430 aa28.4■■■□□ 2.14
RNF220-212ENST00000475378 MYO5BQ9ULV0 1848 aa28.37■■■□□ 2.13
RNF220-212ENST00000475378 MSH6P52701 1360 aa28.37■■■□□ 2.13
RNF220-212ENST00000475378 COL16A1Q07092 1604 aaPredicted RBP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms