RNA–Protein interactions for RNA: ENST00000475296.5

PLS1-206, Transcript of plastin 1, humanhuman

TSL 3

Gene PLS1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS1-206ENST00000475296 UBAP1LF5GYI3 381 aa20.5■□□□□ 0.87
PLS1-206ENST00000475296 ILDR2Q71H61 639 aa20.5■□□□□ 0.87
PLS1-206ENST00000475296 WASHC2CQ9Y4E1 1318 aa20.49■□□□□ 0.87
PLS1-206ENST00000475296 CEP170BQ9Y4F5 1589 aaPredicted RBP20.48■□□□□ 0.87
PLS1-206ENST00000475296 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
PLS1-206ENST00000475296 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
PLS1-206ENST00000475296 FBXO31Q5XUX0 539 aaPredicted RBP20.48■□□□□ 0.87
PLS1-206ENST00000475296 MYO3AQ8NEV4 1616 aa20.48■□□□□ 0.87
PLS1-206ENST00000475296 PLA2R1Q13018 1463 aa20.48■□□□□ 0.87
PLS1-206ENST00000475296 ZNF142P52746 1687 aaPredicted RBP20.45■□□□□ 0.86
PLS1-206ENST00000475296 NCOA2Q15596 1464 aa20.44■□□□□ 0.86
PLS1-206ENST00000475296 CCDC141Q6ZP82 1450 aa20.44■□□□□ 0.86
PLS1-206ENST00000475296 A2ML1A8K2U0 1454 aa20.43■□□□□ 0.86
PLS1-206ENST00000475296 TCOF1Q13428 1488 aaKnown RBP20.43■□□□□ 0.86
PLS1-206ENST00000475296 TNRQ92752 1358 aa20.43■□□□□ 0.86
PLS1-206ENST00000475296 SOCS7O14512 581 aa20.42■□□□□ 0.86
PLS1-206ENST00000475296 CAMSAP2Q08AD1 1489 aa20.42■□□□□ 0.86
PLS1-206ENST00000475296 ANKLE2Q86XL3 938 aa20.4■□□□□ 0.86
PLS1-206ENST00000475296 THEMISQ8N1K5 641 aaPredicted RBP20.4■□□□□ 0.86
PLS1-206ENST00000475296 DNMT1P26358 1616 aaKnown RBP20.38■□□□□ 0.85
PLS1-206ENST00000475296 CNKSR2Q8WXI2 1034 aa20.37■□□□□ 0.85
PLS1-206ENST00000475296 SPATA31D1Q6ZQQ2 1576 aa20.37■□□□□ 0.85
PLS1-206ENST00000475296 KDM5DQ9BY66 1539 aa20.37■□□□□ 0.85
PLS1-206ENST00000475296 LOC105371045A0A1W2PR82 267 aa20.36■□□□□ 0.85
PLS1-206ENST00000475296 PZPP20742 1482 aa20.36■□□□□ 0.85
PLS1-206ENST00000475296 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.35■□□□□ 0.85
PLS1-206ENST00000475296 MIA2Q96PC5 1412 aa20.35■□□□□ 0.85
PLS1-206ENST00000475296 TOM1O60784 492 aa20.34■□□□□ 0.85
PLS1-206ENST00000475296 PIP4K2BP78356 416 aa20.34■□□□□ 0.85
PLS1-206ENST00000475296 FAM135AQ9P2D6 1515 aa20.32■□□□□ 0.84
PLS1-206ENST00000475296 ARHGEF5Q12774 1597 aa20.31■□□□□ 0.84
PLS1-206ENST00000475296 LRRC9Q6ZRR7 1453 aa20.3■□□□□ 0.84
PLS1-206ENST00000475296 NLRP1Q9C000 1473 aa20.3■□□□□ 0.84
PLS1-206ENST00000475296 VPS8Q8N3P4 1428 aa20.29■□□□□ 0.84
PLS1-206ENST00000475296 KANK4Q5T7N3 995 aaPredicted RBP20.29■□□□□ 0.84
PLS1-206ENST00000475296 SHANK2Q9UPX8 1470 aa20.29■□□□□ 0.84
PLS1-206ENST00000475296 NCBP3Q53F19 620 aaKnown RBP20.28■□□□□ 0.84
PLS1-206ENST00000475296 UGGT1Q9NYU2 1555 aa20.28■□□□□ 0.84
PLS1-206ENST00000475296 POLR1AO95602 1720 aaPredicted RBP20.27■□□□□ 0.83
PLS1-206ENST00000475296 CPS1P31327 1500 aa20.27■□□□□ 0.83
PLS1-206ENST00000475296 HSPA1LP34931 641 aa20.26■□□□□ 0.83
PLS1-206ENST00000475296 NPHP4O75161 1426 aaPredicted RBP20.25■□□□□ 0.83
PLS1-206ENST00000475296 NEURL4Q96JN8 1562 aa20.25■□□□□ 0.83
PLS1-206ENST00000475296 APLP2Q06481 763 aa20.23■□□□□ 0.83
PLS1-206ENST00000475296 MYOM3Q5VTT5 1437 aa20.21■□□□□ 0.83
PLS1-206ENST00000475296 MED14O60244 1454 aa20.2■□□□□ 0.82
PLS1-206ENST00000475296 ABCC3O15438 1527 aa20.2■□□□□ 0.82
PLS1-206ENST00000475296 MAST1Q9Y2H9 1570 aa20.2■□□□□ 0.82
PLS1-206ENST00000475296 RRP7BPQ9NSQ0 103 aa20.19■□□□□ 0.82
PLS1-206ENST00000475296 RNF17Q9BXT8 1623 aaKnown RBP20.18■□□□□ 0.82
PLS1-206ENST00000475296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.18■□□□□ 0.82
PLS1-206ENST00000475296 CFAP65Q6ZU64 1925 aaKnown RBP20.17■□□□□ 0.82
PLS1-206ENST00000475296 MAP3K1Q13233 1512 aa20.17■□□□□ 0.82
PLS1-206ENST00000475296 DEPDC5O75140 1603 aa20.17■□□□□ 0.82
PLS1-206ENST00000475296 VWDEQ8N2E2 1590 aa20.17■□□□□ 0.82
PLS1-206ENST00000475296 ERVK-7P63135 1459 aa20.16■□□□□ 0.82
PLS1-206ENST00000475296 ZC3H13Q5T200 1668 aaKnown RBP20.16■□□□□ 0.82
PLS1-206ENST00000475296 TXNDC2Q86VQ3 553 aa20.15■□□□□ 0.82
PLS1-206ENST00000475296 DUOX2Q9NRD8 1548 aa20.15■□□□□ 0.82
PLS1-206ENST00000475296 EIF2AK4Q9P2K8 1649 aaKnown RBP20.15■□□□□ 0.82
PLS1-206ENST00000475296 STAG3Q9UJ98 1225 aa20.14■□□□□ 0.81
PLS1-206ENST00000475296 IQGAP1P46940 1657 aa20.13■□□□□ 0.81
PLS1-206ENST00000475296 KIF15Q9NS87 1388 aa20.13■□□□□ 0.81
PLS1-206ENST00000475296 EID1Q9Y6B2 187 aa20.13■□□□□ 0.81
PLS1-206ENST00000475296 MROH1Q8NDA8 1641 aa20.12■□□□□ 0.81
PLS1-206ENST00000475296 CEP152O94986 1710 aa20.1■□□□□ 0.81
PLS1-206ENST00000475296 KANK1Q14678 1352 aa20.1■□□□□ 0.81
PLS1-206ENST00000475296 KCNA4P22459 653 aa20.1■□□□□ 0.81
PLS1-206ENST00000475296 LTKP29376 864 aa20.1■□□□□ 0.81
PLS1-206ENST00000475296 CHIC2Q9UKJ5 165 aa20.1■□□□□ 0.81
PLS1-206ENST00000475296 ABCC5O15440 1437 aa20.09■□□□□ 0.81
PLS1-206ENST00000475296 LRRC7Q96NW7 1537 aa20.07■□□□□ 0.8
PLS1-206ENST00000475296 CROCC2H7BZ55 1655 aa20.07■□□□□ 0.8
PLS1-206ENST00000475296 SCAF11Q99590 1463 aaKnown RBP20.07■□□□□ 0.8
PLS1-206ENST00000475296 ARHGAP31Q2M1Z3 1444 aa20.07■□□□□ 0.8
PLS1-206ENST00000475296 ERBINQ96RT1 1412 aa20.07■□□□□ 0.8
PLS1-206ENST00000475296 UBR1Q8IWV7 1749 aa20.05■□□□□ 0.8
PLS1-206ENST00000475296 MED1Q15648 1581 aaPredicted RBP20.05■□□□□ 0.8
PLS1-206ENST00000475296 PTPN23Q9H3S7 1636 aa20.05■□□□□ 0.8
PLS1-206ENST00000475296 RNF216Q9NWF9 866 aaPredicted RBP20.04■□□□□ 0.8
PLS1-206ENST00000475296 ANKRD30AQ9BXX3 1397 aa20.04■□□□□ 0.8
PLS1-206ENST00000475296 STRCP1A6NGW2 1772 aa20.03■□□□□ 0.8
PLS1-206ENST00000475296 DAPK1P53355 1430 aa20.03■□□□□ 0.8
PLS1-206ENST00000475296 HOXD11P31277 338 aaPredicted RBP20.03■□□□□ 0.8
PLS1-206ENST00000475296 IDI1Q13907 227 aa20.02■□□□□ 0.8
PLS1-206ENST00000475296 PRDM15P57071 1507 aaPredicted RBP20.02■□□□□ 0.79
PLS1-206ENST00000475296 ARHGAP23Q9P227 1491 aa20.01■□□□□ 0.79
PLS1-206ENST00000475296 ALKQ9UM73 1620 aa20.01■□□□□ 0.79
PLS1-206ENST00000475296 SLIT1O75093 1534 aa20.01■□□□□ 0.79
PLS1-206ENST00000475296 FGD6Q6ZV73 1430 aa20.01■□□□□ 0.79
PLS1-206ENST00000475296 TMEM2Q9UHN6 1383 aa20■□□□□ 0.79
PLS1-206ENST00000475296 SYNMO15061 1565 aa20■□□□□ 0.79
PLS1-206ENST00000475296 BCANQ96GW7 911 aa19.99■□□□□ 0.79
PLS1-206ENST00000475296 FAM50AQ14320 339 aaKnown RBP19.97■□□□□ 0.79
PLS1-206ENST00000475296 SLC26A8Q96RN1 970 aa19.97■□□□□ 0.79
PLS1-206ENST00000475296 NPM3O75607 178 aaKnown RBP19.96■□□□□ 0.79
PLS1-206ENST00000475296 PIK3C2BO00750 1634 aa19.95■□□□□ 0.78
PLS1-206ENST00000475296 KCNA6P17658 529 aa19.95■□□□□ 0.78
PLS1-206ENST00000475296 PROSER2Q86WR7 435 aaPredicted RBP19.95■□□□□ 0.78
PLS1-206ENST00000475296 SLC52A1Q9NWF4 448 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms