RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 TRAPPC8Q9Y2L5 1435 aa14.76□□□□□ -0.05
PCCB-213ENST00000475214 RTEL1-TNFRSF6BF6WH68 1400 aa14.75□□□□□ -0.05
PCCB-213ENST00000475214 SPAG9O60271 1321 aaKnown RBP14.75□□□□□ -0.05
PCCB-213ENST00000475214 ZNF316A6NFI3 1004 aaPredicted RBP14.74□□□□□ -0.05
PCCB-213ENST00000475214 DUOX2Q9NRD8 1548 aa14.74□□□□□ -0.05
PCCB-213ENST00000475214 TONSLQ96HA7 1378 aa14.73□□□□□ -0.05
PCCB-213ENST00000475214 HSPA2P54652 639 aa14.73□□□□□ -0.05
PCCB-213ENST00000475214 PZPP20742 1482 aa14.73□□□□□ -0.05
PCCB-213ENST00000475214 NUP155O75694 1391 aa14.73□□□□□ -0.05
PCCB-213ENST00000475214 AFAP1Q8N556 730 aa14.72□□□□□ -0.05
PCCB-213ENST00000475214 FER1L4A9Z1Z3 1794 aa14.72□□□□□ -0.05
PCCB-213ENST00000475214 KDM5DQ9BY66 1539 aa14.71□□□□□ -0.05
PCCB-213ENST00000475214 MLECQ14165 292 aa14.71□□□□□ -0.05
PCCB-213ENST00000475214 KDM5CP41229 1560 aa14.71□□□□□ -0.05
PCCB-213ENST00000475214 ERBINQ96RT1 1412 aa14.7□□□□□ -0.06
PCCB-213ENST00000475214 PLPPR3Q6T4P5 718 aa14.7□□□□□ -0.06
PCCB-213ENST00000475214 MLH3Q9UHC1 1453 aa14.69□□□□□ -0.06
PCCB-213ENST00000475214 ANKRD30BQ9BXX2 1392 aa14.69□□□□□ -0.06
PCCB-213ENST00000475214 PPP1R15AO75807 674 aaPredicted RBP14.68□□□□□ -0.06
PCCB-213ENST00000475214 PKD2Q13563 968 aa14.68□□□□□ -0.06
PCCB-213ENST00000475214 FOXD1Q16676 465 aa14.68□□□□□ -0.06
PCCB-213ENST00000475214 INO80Q9ULG1 1556 aaPredicted RBP14.68□□□□□ -0.06
PCCB-213ENST00000475214 ATP7AQ04656 1500 aa14.67□□□□□ -0.06
PCCB-213ENST00000475214 UNC13BO14795 1591 aa14.67□□□□□ -0.06
PCCB-213ENST00000475214 ESF1Q9H501 851 aaKnown RBP14.66□□□□□ -0.06
PCCB-213ENST00000475214 REREQ9P2R6 1566 aa14.65□□□□□ -0.06
PCCB-213ENST00000475214 PREX1Q8TCU6 1659 aa14.65□□□□□ -0.06
PCCB-213ENST00000475214 CERKQ8TCT0 537 aa14.64□□□□□ -0.07
PCCB-213ENST00000475214 FAM135AQ9P2D6 1515 aa14.64□□□□□ -0.07
PCCB-213ENST00000475214 RPRD2Q5VT52 1461 aaKnown RBP14.63□□□□□ -0.07
PCCB-213ENST00000475214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.63□□□□□ -0.07
PCCB-213ENST00000475214 DIP2CQ9Y2E4 1556 aa14.63□□□□□ -0.07
PCCB-213ENST00000475214 IQGAP3Q86VI3 1631 aa14.62□□□□□ -0.07
PCCB-213ENST00000475214 AGLP35573 1532 aa14.61□□□□□ -0.07
PCCB-213ENST00000475214 DHX29Q7Z478 1369 aaKnown RBP14.6□□□□□ -0.07
PCCB-213ENST00000475214 KIDINS220Q9ULH0 1771 aa14.6□□□□□ -0.07
PCCB-213ENST00000475214 CEBPAP49715 358 aaPredicted RBP14.6□□□□□ -0.07
PCCB-213ENST00000475214 ABCA6Q8N139 1617 aa14.59□□□□□ -0.07
PCCB-213ENST00000475214 EIF2AK4Q9P2K8 1649 aaKnown RBP14.59□□□□□ -0.07
PCCB-213ENST00000475214 DIEXFQ68CQ4 756 aaKnown RBP14.59□□□□□ -0.07
PCCB-213ENST00000475214 CNTLNQ9NXG0 1405 aa14.58□□□□□ -0.07
PCCB-213ENST00000475214 KANK1Q14678 1352 aa14.58□□□□□ -0.08
PCCB-213ENST00000475214 STRCQ7RTU9 1775 aa14.57□□□□□ -0.08
PCCB-213ENST00000475214 L3MBTL2Q969R5 705 aa14.57□□□□□ -0.08
PCCB-213ENST00000475214 UHRF1BP1Q6BDS2 1440 aa14.56□□□□□ -0.08
PCCB-213ENST00000475214 A2MP01023 1474 aa14.56□□□□□ -0.08
PCCB-213ENST00000475214 DEPDC5O75140 1603 aa14.55□□□□□ -0.08
PCCB-213ENST00000475214 KIF3BO15066 747 aa14.55□□□□□ -0.08
PCCB-213ENST00000475214 DMRT2Q9Y5R5 561 aa14.55□□□□□ -0.08
PCCB-213ENST00000475214 SETD1BQ9UPS6 1966 aaKnown RBP14.53□□□□□ -0.08
PCCB-213ENST00000475214 C3P01024 1663 aa14.53□□□□□ -0.08
PCCB-213ENST00000475214 PPP6R1Q9UPN7 881 aa14.52□□□□□ -0.09
PCCB-213ENST00000475214 CCDC144AA2RUR9 1427 aa14.51□□□□□ -0.09
PCCB-213ENST00000475214 PRDM15P57071 1507 aaPredicted RBP14.51□□□□□ -0.09
PCCB-213ENST00000475214 TET3O43151 1660 aa14.5□□□□□ -0.09
PCCB-213ENST00000475214 VWDEQ8N2E2 1590 aa14.5□□□□□ -0.09
PCCB-213ENST00000475214 PTPRTO14522 1441 aa14.49□□□□□ -0.09
PCCB-213ENST00000475214 RNF17Q9BXT8 1623 aaKnown RBP14.48□□□□□ -0.09
PCCB-213ENST00000475214 NPATQ14207 1427 aa14.48□□□□□ -0.09
PCCB-213ENST00000475214 E9PCH4 1651 aa14.47□□□□□ -0.09
PCCB-213ENST00000475214 GGT6Q6P531 493 aa14.47□□□□□ -0.09
PCCB-213ENST00000475214 MROH1Q8NDA8 1641 aa14.47□□□□□ -0.09
PCCB-213ENST00000475214 ZMYM3Q14202 1370 aa14.47□□□□□ -0.09
PCCB-213ENST00000475214 MROH2AA6NES4 1674 aa14.46□□□□□ -0.09
PCCB-213ENST00000475214 PLA2R1Q13018 1463 aa14.46□□□□□ -0.09
PCCB-213ENST00000475214 LMTK2Q8IWU2 1503 aa14.45□□□□□ -0.1
PCCB-213ENST00000475214 LTBP4Q8N2S1 1624 aa14.44□□□□□ -0.1
PCCB-213ENST00000475214 NBPF8Q3BBV2 869 aa14.44□□□□□ -0.1
PCCB-213ENST00000475214 DISP3Q9P2K9 1392 aa14.44□□□□□ -0.1
PCCB-213ENST00000475214 SPHKAPQ2M3C7 1700 aa14.43□□□□□ -0.1
PCCB-213ENST00000475214 TRPM2O94759 1503 aa14.42□□□□□ -0.1
PCCB-213ENST00000475214 EIF4G2P78344 907 aaKnown RBP eCLIP14.42□□□□□ -0.1
PCCB-213ENST00000475214 EFCAB6Q5THR3 1501 aa14.41□□□□□ -0.1
PCCB-213ENST00000475214 CEP152O94986 1710 aa14.41□□□□□ -0.1
PCCB-213ENST00000475214 ILDR2Q71H61 639 aa14.41□□□□□ -0.1
PCCB-213ENST00000475214 DCAF11Q8TEB1 546 aa14.41□□□□□ -0.1
PCCB-213ENST00000475214 IQSEC2Q5JU85 1478 aa14.41□□□□□ -0.1
PCCB-213ENST00000475214 ZNF326Q5BKZ1 582 aaKnown RBP14.4□□□□□ -0.1
PCCB-213ENST00000475214 WASHC2CQ9Y4E1 1318 aa14.4□□□□□ -0.1
PCCB-213ENST00000475214 HSPA5P11021 654 aaKnown RBP14.39□□□□□ -0.11
PCCB-213ENST00000475214 RGL3Q3MIN7 710 aa14.39□□□□□ -0.11
PCCB-213ENST00000475214 KDM2AQ9Y2K7 1162 aa14.39□□□□□ -0.11
PCCB-213ENST00000475214 CAMSAP1Q5T5Y3 1602 aa14.39□□□□□ -0.11
PCCB-213ENST00000475214 CLTCQ00610 1675 aaKnown RBP14.39□□□□□ -0.11
PCCB-213ENST00000475214 HIRIP3Q9BW71 556 aaPredicted RBP14.38□□□□□ -0.11
PCCB-213ENST00000475214 SPATA31D1Q6ZQQ2 1576 aa14.37□□□□□ -0.11
PCCB-213ENST00000475214 ZC3H13Q5T200 1668 aaKnown RBP14.36□□□□□ -0.11
PCCB-213ENST00000475214 ABCC3O15438 1527 aa14.36□□□□□ -0.11
PCCB-213ENST00000475214 SOCS7O14512 581 aa14.36□□□□□ -0.11
PCCB-213ENST00000475214 STAC3Q96MF2 364 aa14.36□□□□□ -0.11
PCCB-213ENST00000475214 CLTCL1P53675 1640 aa14.36□□□□□ -0.11
PCCB-213ENST00000475214 RALGAPBQ86X10 1494 aa14.36□□□□□ -0.11
PCCB-213ENST00000475214 ZNF142P52746 1687 aaPredicted RBP14.35□□□□□ -0.11
PCCB-213ENST00000475214 MYO3AQ8NEV4 1616 aa14.34□□□□□ -0.11
PCCB-213ENST00000475214 SPATA31E1Q6ZUB1 1445 aa14.34□□□□□ -0.11
PCCB-213ENST00000475214 NEURL4Q96JN8 1562 aa14.34□□□□□ -0.11
PCCB-213ENST00000475214 KIF1BO60333 1816 aa14.33□□□□□ -0.12
PCCB-213ENST00000475214 PRAG1Q86YV5 1406 aa14.32□□□□□ -0.12
PCCB-213ENST00000475214 DDX10Q13206 875 aaKnown RBP14.32□□□□□ -0.12
PCCB-213ENST00000475214 MIER1Q8N108 512 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms