RNA–Protein interactions for RNA: ENST00000475074.1

IMP4-214, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-214ENST00000475074 RNF17Q9BXT8 1623 aaKnown RBP16.4■□□□□ 0.22
IMP4-214ENST00000475074 PPP6R1Q9UPN7 881 aa16.39■□□□□ 0.21
IMP4-214ENST00000475074 FAM135AQ9P2D6 1515 aa16.38■□□□□ 0.21
IMP4-214ENST00000475074 PRDM15P57071 1507 aaPredicted RBP16.37■□□□□ 0.21
IMP4-214ENST00000475074 KIF3BO15066 747 aa16.36■□□□□ 0.21
IMP4-214ENST00000475074 KANK1Q14678 1352 aa16.35■□□□□ 0.21
IMP4-214ENST00000475074 VWDEQ8N2E2 1590 aa16.34■□□□□ 0.21
IMP4-214ENST00000475074 IQGAP3Q86VI3 1631 aa16.34■□□□□ 0.21
IMP4-214ENST00000475074 NUP155O75694 1391 aa16.34■□□□□ 0.21
IMP4-214ENST00000475074 CLSPNQ9HAW4 1339 aa16.33■□□□□ 0.2
IMP4-214ENST00000475074 MROH1Q8NDA8 1641 aa16.33■□□□□ 0.2
IMP4-214ENST00000475074 LMTK2Q8IWU2 1503 aa16.32■□□□□ 0.2
IMP4-214ENST00000475074 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
IMP4-214ENST00000475074 ZC3H13Q5T200 1668 aaKnown RBP16.3■□□□□ 0.2
IMP4-214ENST00000475074 PZPP20742 1482 aa16.3■□□□□ 0.2
IMP4-214ENST00000475074 DHX57Q6P158 1386 aaKnown RBP16.3■□□□□ 0.2
IMP4-214ENST00000475074 MPHOSPH9Q99550 1183 aa16.29■□□□□ 0.2
IMP4-214ENST00000475074 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
IMP4-214ENST00000475074 SIGLEC1Q9BZZ2 1709 aa16.28■□□□□ 0.2
IMP4-214ENST00000475074 TET3O43151 1660 aa16.27■□□□□ 0.19
IMP4-214ENST00000475074 GGT6Q6P531 493 aa16.26■□□□□ 0.19
IMP4-214ENST00000475074 RPRD2Q5VT52 1461 aaKnown RBP16.25■□□□□ 0.19
IMP4-214ENST00000475074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.25■□□□□ 0.19
IMP4-214ENST00000475074 ARHGAP31Q2M1Z3 1444 aa16.25■□□□□ 0.19
IMP4-214ENST00000475074 ABCC3O15438 1527 aa16.24■□□□□ 0.19
IMP4-214ENST00000475074 WASHC2CQ9Y4E1 1318 aa16.24■□□□□ 0.19
IMP4-214ENST00000475074 CNTLNQ9NXG0 1405 aa16.24■□□□□ 0.19
IMP4-214ENST00000475074 ARID4BQ4LE39 1312 aaPredicted RBP16.23■□□□□ 0.19
IMP4-214ENST00000475074 EFCAB6Q5THR3 1501 aa16.23■□□□□ 0.19
IMP4-214ENST00000475074 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
IMP4-214ENST00000475074 PKD2Q13563 968 aa16.21■□□□□ 0.19
IMP4-214ENST00000475074 MROH2AA6NES4 1674 aa16.2■□□□□ 0.18
IMP4-214ENST00000475074 CAMSAP1Q5T5Y3 1602 aa16.19■□□□□ 0.18
IMP4-214ENST00000475074 CEP152O94986 1710 aa16.19■□□□□ 0.18
IMP4-214ENST00000475074 ESF1Q9H501 851 aaKnown RBP16.19■□□□□ 0.18
IMP4-214ENST00000475074 E9PCH4 1651 aa16.18■□□□□ 0.18
IMP4-214ENST00000475074 ANKRD30BQ9BXX2 1392 aa16.18■□□□□ 0.18
IMP4-214ENST00000475074 PTPRTO14522 1441 aa16.18■□□□□ 0.18
IMP4-214ENST00000475074 CLTCQ00610 1675 aaKnown RBP16.16■□□□□ 0.18
IMP4-214ENST00000475074 ADAMTSL3P82987 1691 aa16.15■□□□□ 0.18
IMP4-214ENST00000475074 MLECQ14165 292 aa16.15■□□□□ 0.18
IMP4-214ENST00000475074 NPATQ14207 1427 aa16.15■□□□□ 0.18
IMP4-214ENST00000475074 FER1L4A9Z1Z3 1794 aa16.14■□□□□ 0.17
IMP4-214ENST00000475074 TIMELESSQ9UNS1 1208 aa16.13■□□□□ 0.17
IMP4-214ENST00000475074 SPHKAPQ2M3C7 1700 aa16.13■□□□□ 0.17
IMP4-214ENST00000475074 TRPM2O94759 1503 aa16.13■□□□□ 0.17
IMP4-214ENST00000475074 ZMYM3Q14202 1370 aa16.13■□□□□ 0.17
IMP4-214ENST00000475074 NOS1P29475 1434 aa16.12■□□□□ 0.17
IMP4-214ENST00000475074 PLA2R1Q13018 1463 aa16.1■□□□□ 0.17
IMP4-214ENST00000475074 NEURL4Q96JN8 1562 aa16.09■□□□□ 0.17
IMP4-214ENST00000475074 ZEB1P37275 1124 aaPredicted RBP16.09■□□□□ 0.17
IMP4-214ENST00000475074 FOXD1Q16676 465 aa16.09■□□□□ 0.17
IMP4-214ENST00000475074 SLC52A1Q9NWF4 448 aa16.09■□□□□ 0.17
IMP4-214ENST00000475074 CCDC144AA2RUR9 1427 aa16.09■□□□□ 0.17
IMP4-214ENST00000475074 SPATA31D1Q6ZQQ2 1576 aa16.09■□□□□ 0.17
IMP4-214ENST00000475074 MADDQ8WXG6 1647 aa16.08■□□□□ 0.17
IMP4-214ENST00000475074 PREX1Q8TCU6 1659 aa16.08■□□□□ 0.17
IMP4-214ENST00000475074 ERVK-7P63135 1459 aa16.08■□□□□ 0.16
IMP4-214ENST00000475074 C3P01024 1663 aa16.05■□□□□ 0.16
IMP4-214ENST00000475074 PIK3C2BO00750 1634 aa16.05■□□□□ 0.16
IMP4-214ENST00000475074 RIMS1Q86UR5 1692 aaKnown RBP16.04■□□□□ 0.16
IMP4-214ENST00000475074 AEBP2Q6ZN18 517 aaPredicted RBP16.03■□□□□ 0.16
IMP4-214ENST00000475074 SYNMO15061 1565 aa16.03■□□□□ 0.16
IMP4-214ENST00000475074 STAC3Q96MF2 364 aa16.02■□□□□ 0.16
IMP4-214ENST00000475074 SIN3AQ96ST3 1273 aa16.02■□□□□ 0.16
IMP4-214ENST00000475074 CLTCL1P53675 1640 aa16.01■□□□□ 0.15
IMP4-214ENST00000475074 NLRP1Q9C000 1473 aa16.01■□□□□ 0.15
IMP4-214ENST00000475074 KDM5AP29375 1690 aaKnown RBP16.01■□□□□ 0.15
IMP4-214ENST00000475074 TNRQ92752 1358 aa16■□□□□ 0.15
IMP4-214ENST00000475074 PTPRMP28827 1452 aa16■□□□□ 0.15
IMP4-214ENST00000475074 FBXO31Q5XUX0 539 aaPredicted RBP16■□□□□ 0.15
IMP4-214ENST00000475074 KIF1BO60333 1816 aa16■□□□□ 0.15
IMP4-214ENST00000475074 CFAP65Q6ZU64 1925 aaKnown RBP16■□□□□ 0.15
IMP4-214ENST00000475074 SPATA31E1Q6ZUB1 1445 aa15.99■□□□□ 0.15
IMP4-214ENST00000475074 TONSLQ96HA7 1378 aa15.99■□□□□ 0.15
IMP4-214ENST00000475074 NEUROD1Q13562 356 aa15.98■□□□□ 0.15
IMP4-214ENST00000475074 SETD1BQ9UPS6 1966 aaKnown RBP15.98■□□□□ 0.15
IMP4-214ENST00000475074 IDI1Q13907 227 aa15.97■□□□□ 0.15
IMP4-214ENST00000475074 ADGRB3O60242 1522 aa15.97■□□□□ 0.15
IMP4-214ENST00000475074 RPGRIP1LQ68CZ1 1315 aa15.96■□□□□ 0.15
IMP4-214ENST00000475074 UGGT1Q9NYU2 1555 aa15.95■□□□□ 0.14
IMP4-214ENST00000475074 CEBPAP49715 358 aaPredicted RBP15.94■□□□□ 0.14
IMP4-214ENST00000475074 TMEM131LA2VDJ0 1609 aa15.94■□□□□ 0.14
IMP4-214ENST00000475074 KDM4FA0A1W2PPD8 638 aa15.93■□□□□ 0.14
IMP4-214ENST00000475074 L3MBTL2Q969R5 705 aa15.92■□□□□ 0.14
IMP4-214ENST00000475074 A2ML1A8K2U0 1454 aa15.91■□□□□ 0.14
IMP4-214ENST00000475074 MYO3AQ8NEV4 1616 aa15.9■□□□□ 0.14
IMP4-214ENST00000475074 ZNF142P52746 1687 aaPredicted RBP15.9■□□□□ 0.14
IMP4-214ENST00000475074 PPP1R15AO75807 674 aaPredicted RBP15.9■□□□□ 0.14
IMP4-214ENST00000475074 UBR1Q8IWV7 1749 aa15.89■□□□□ 0.13
IMP4-214ENST00000475074 ZFYVE9O95405 1425 aa15.89■□□□□ 0.13
IMP4-214ENST00000475074 UHRF1BP1Q6BDS2 1440 aa15.88■□□□□ 0.13
IMP4-214ENST00000475074 HDGFP51858 240 aaKnown RBP15.88■□□□□ 0.13
IMP4-214ENST00000475074 STAG3Q9UJ98 1225 aa15.88■□□□□ 0.13
IMP4-214ENST00000475074 MYOM2P54296 1465 aa15.88■□□□□ 0.13
IMP4-214ENST00000475074 IFT172Q9UG01 1749 aa15.88■□□□□ 0.13
IMP4-214ENST00000475074 CEP170BQ9Y4F5 1589 aaPredicted RBP15.87■□□□□ 0.13
IMP4-214ENST00000475074 THEMISQ8N1K5 641 aaPredicted RBP15.87■□□□□ 0.13
IMP4-214ENST00000475074 PPLO60437 1756 aa15.86■□□□□ 0.13
IMP4-214ENST00000475074 RGL3Q3MIN7 710 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms