RNA–Protein interactions for RNA: ENST00000474993.5

NPM3-204, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 2

Gene NPM3, Length 755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-204ENST00000474993 BCORL1Q5H9F3 1711 aa30.43■■■□□ 2.46
NPM3-204ENST00000474993 PPP6R1Q9UPN7 881 aa30.42■■■□□ 2.46
NPM3-204ENST00000474993 GGT6Q6P531 493 aa30.41■■■□□ 2.46
NPM3-204ENST00000474993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.4■■■□□ 2.46
NPM3-204ENST00000474993 NUP155O75694 1391 aa30.4■■■□□ 2.46
NPM3-204ENST00000474993 RNF17Q9BXT8 1623 aaKnown RBP30.36■■■□□ 2.45
NPM3-204ENST00000474993 UNC13BO14795 1591 aa30.36■■■□□ 2.45
NPM3-204ENST00000474993 DEPDC5O75140 1603 aa30.33■■■□□ 2.45
NPM3-204ENST00000474993 MLECQ14165 292 aa30.32■■■□□ 2.44
NPM3-204ENST00000474993 ESF1Q9H501 851 aaKnown RBP30.32■■■□□ 2.44
NPM3-204ENST00000474993 PRDM15P57071 1507 aaPredicted RBP30.32■■■□□ 2.44
NPM3-204ENST00000474993 KDM5DQ9BY66 1539 aa30.31■■■□□ 2.44
NPM3-204ENST00000474993 WASHC2CQ9Y4E1 1318 aa30.3■■■□□ 2.44
NPM3-204ENST00000474993 FAM135AQ9P2D6 1515 aa30.3■■■□□ 2.44
NPM3-204ENST00000474993 SLC4A1APQ9BWU0 796 aaKnown RBP30.29■■■□□ 2.44
NPM3-204ENST00000474993 MPHOSPH9Q99550 1183 aa30.27■■■□□ 2.44
NPM3-204ENST00000474993 SIGLEC1Q9BZZ2 1709 aa30.27■■■□□ 2.44
NPM3-204ENST00000474993 MROH1Q8NDA8 1641 aa30.25■■■□□ 2.43
NPM3-204ENST00000474993 VWDEQ8N2E2 1590 aa30.24■■■□□ 2.43
NPM3-204ENST00000474993 IQGAP3Q86VI3 1631 aa30.24■■■□□ 2.43
NPM3-204ENST00000474993 LMTK2Q8IWU2 1503 aa30.22■■■□□ 2.43
NPM3-204ENST00000474993 CNTLNQ9NXG0 1405 aa30.22■■■□□ 2.43
NPM3-204ENST00000474993 PZPP20742 1482 aa30.2■■■□□ 2.43
NPM3-204ENST00000474993 ZC3H13Q5T200 1668 aaKnown RBP30.19■■■□□ 2.42
NPM3-204ENST00000474993 ABCC3O15438 1527 aa30.18■■■□□ 2.42
NPM3-204ENST00000474993 PKD2Q13563 968 aa30.17■■■□□ 2.42
NPM3-204ENST00000474993 DHX57Q6P158 1386 aaKnown RBP30.15■■■□□ 2.42
NPM3-204ENST00000474993 TET3O43151 1660 aa30.14■■■□□ 2.41
NPM3-204ENST00000474993 CCER1Q8TC90 406 aaPredicted RBP30.11■■■□□ 2.41
NPM3-204ENST00000474993 ARHGAP31Q2M1Z3 1444 aa30.11■■■□□ 2.41
NPM3-204ENST00000474993 CEP152O94986 1710 aa30.09■■■□□ 2.41
NPM3-204ENST00000474993 RPRD2Q5VT52 1461 aaKnown RBP30.09■■■□□ 2.41
NPM3-204ENST00000474993 EFCAB6Q5THR3 1501 aa30.08■■■□□ 2.41
NPM3-204ENST00000474993 ZMYM3Q14202 1370 aa30.07■■■□□ 2.4
NPM3-204ENST00000474993 CLSPNQ9HAW4 1339 aa30.06■■■□□ 2.4
NPM3-204ENST00000474993 CLTCQ00610 1675 aaKnown RBP30.06■■■□□ 2.4
NPM3-204ENST00000474993 CAMSAP1Q5T5Y3 1602 aa30.06■■■□□ 2.4
NPM3-204ENST00000474993 ADAMTSL3P82987 1691 aa30.04■■■□□ 2.4
NPM3-204ENST00000474993 FER1L4A9Z1Z3 1794 aa30.04■■■□□ 2.4
NPM3-204ENST00000474993 NPATQ14207 1427 aa30.03■■■□□ 2.4
NPM3-204ENST00000474993 MROH2AA6NES4 1674 aa30.02■■■□□ 2.4
NPM3-204ENST00000474993 FOXD1Q16676 465 aa30■■■□□ 2.39
NPM3-204ENST00000474993 MADDQ8WXG6 1647 aa29.99■■■□□ 2.39
NPM3-204ENST00000474993 E9PCH4 1651 aa29.98■■■□□ 2.39
NPM3-204ENST00000474993 ANKRD30BQ9BXX2 1392 aa29.96■■■□□ 2.39
NPM3-204ENST00000474993 PTPRTO14522 1441 aa29.95■■■□□ 2.38
NPM3-204ENST00000474993 RIMS1Q86UR5 1692 aaKnown RBP29.92■■■□□ 2.38
NPM3-204ENST00000474993 NOS1P29475 1434 aa29.91■■■□□ 2.38
NPM3-204ENST00000474993 FBXO31Q5XUX0 539 aaPredicted RBP29.9■■■□□ 2.38
NPM3-204ENST00000474993 ERVK-7P63135 1459 aa29.9■■■□□ 2.38
NPM3-204ENST00000474993 SLC52A1Q9NWF4 448 aa29.89■■■□□ 2.38
NPM3-204ENST00000474993 CCDC144AA2RUR9 1427 aa29.88■■■□□ 2.37
NPM3-204ENST00000474993 CEBPAP49715 358 aaPredicted RBP29.88■■■□□ 2.37
NPM3-204ENST00000474993 TRPM2O94759 1503 aa29.87■■■□□ 2.37
NPM3-204ENST00000474993 PLA2R1Q13018 1463 aa29.87■■■□□ 2.37
NPM3-204ENST00000474993 SPATA31D1Q6ZQQ2 1576 aa29.86■■■□□ 2.37
NPM3-204ENST00000474993 SPHKAPQ2M3C7 1700 aa29.86■■■□□ 2.37
NPM3-204ENST00000474993 PTPRMP28827 1452 aa29.86■■■□□ 2.37
NPM3-204ENST00000474993 C3P01024 1663 aa29.85■■■□□ 2.37
NPM3-204ENST00000474993 KDM4FA0A1W2PPD8 638 aa29.85■■■□□ 2.37
NPM3-204ENST00000474993 TNRQ92752 1358 aa29.85■■■□□ 2.37
NPM3-204ENST00000474993 PREX1Q8TCU6 1659 aa29.85■■■□□ 2.37
NPM3-204ENST00000474993 PLPPR3Q6T4P5 718 aa29.84■■■□□ 2.37
NPM3-204ENST00000474993 CFAP65Q6ZU64 1925 aaKnown RBP29.81■■■□□ 2.36
NPM3-204ENST00000474993 NEUROD1Q13562 356 aa29.78■■■□□ 2.36
NPM3-204ENST00000474993 SIN3AQ96ST3 1273 aa29.78■■■□□ 2.36
NPM3-204ENST00000474993 SYNMO15061 1565 aa29.77■■■□□ 2.36
NPM3-204ENST00000474993 IDI1Q13907 227 aa29.76■■■□□ 2.35
NPM3-204ENST00000474993 NLRP1Q9C000 1473 aa29.74■■■□□ 2.35
NPM3-204ENST00000474993 STAG3Q9UJ98 1225 aa29.73■■■□□ 2.35
NPM3-204ENST00000474993 TIMELESSQ9UNS1 1208 aa29.73■■■□□ 2.35
NPM3-204ENST00000474993 CLTCL1P53675 1640 aa29.71■■■□□ 2.35
NPM3-204ENST00000474993 CHGAP10645 457 aaKnown RBP29.7■■■□□ 2.35
NPM3-204ENST00000474993 PIK3C2BO00750 1634 aa29.7■■■□□ 2.34
NPM3-204ENST00000474993 SETD1BQ9UPS6 1966 aaKnown RBP29.69■■■□□ 2.34
NPM3-204ENST00000474993 UGGT1Q9NYU2 1555 aa29.68■■■□□ 2.34
NPM3-204ENST00000474993 TONSLQ96HA7 1378 aa29.67■■■□□ 2.34
NPM3-204ENST00000474993 NEURL4Q96JN8 1562 aa29.64■■■□□ 2.34
NPM3-204ENST00000474993 ZEB1P37275 1124 aaPredicted RBP29.64■■■□□ 2.34
NPM3-204ENST00000474993 KIF1BO60333 1816 aa29.63■■■□□ 2.33
NPM3-204ENST00000474993 UHRF1BP1Q6BDS2 1440 aa29.62■■■□□ 2.33
NPM3-204ENST00000474993 SPATA31E1Q6ZUB1 1445 aa29.62■■■□□ 2.33
NPM3-204ENST00000474993 A2ML1A8K2U0 1454 aa29.62■■■□□ 2.33
NPM3-204ENST00000474993 RGL3Q3MIN7 710 aa29.62■■■□□ 2.33
NPM3-204ENST00000474993 ZNF326Q5BKZ1 582 aaKnown RBP29.62■■■□□ 2.33
NPM3-204ENST00000474993 STAC3Q96MF2 364 aa29.61■■■□□ 2.33
NPM3-204ENST00000474993 RPGRIP1LQ68CZ1 1315 aa29.61■■■□□ 2.33
NPM3-204ENST00000474993 THEMISQ8N1K5 641 aaPredicted RBP29.6■■■□□ 2.33
NPM3-204ENST00000474993 ADGRB3O60242 1522 aa29.6■■■□□ 2.33
NPM3-204ENST00000474993 HDGFP51858 240 aaKnown RBP29.59■■■□□ 2.33
NPM3-204ENST00000474993 MYO3AQ8NEV4 1616 aa29.59■■■□□ 2.33
NPM3-204ENST00000474993 KDM5AP29375 1690 aaKnown RBP29.57■■■□□ 2.32
NPM3-204ENST00000474993 TMEM131LA2VDJ0 1609 aa29.56■■■□□ 2.32
NPM3-204ENST00000474993 L3MBTL2Q969R5 705 aa29.55■■■□□ 2.32
NPM3-204ENST00000474993 CEP170BQ9Y4F5 1589 aaPredicted RBP29.55■■■□□ 2.32
NPM3-204ENST00000474993 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.52■■■□□ 2.32
NPM3-204ENST00000474993 DCAF11Q8TEB1 546 aa29.52■■■□□ 2.32
NPM3-204ENST00000474993 ZNF142P52746 1687 aaPredicted RBP29.5■■■□□ 2.31
NPM3-204ENST00000474993 VGFO15240 615 aaPredicted RBP29.49■■■□□ 2.31
NPM3-204ENST00000474993 UBR1Q8IWV7 1749 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms