RNA–Protein interactions for RNA: ENST00000474833.5

PCCB-212, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-212ENST00000474833 RTEL1-TNFRSF6BF6WH68 1400 aa24.1■■□□□ 1.45
PCCB-212ENST00000474833 SHANK2Q9UPX8 1470 aa24.1■■□□□ 1.45
PCCB-212ENST00000474833 VWDEQ8N2E2 1590 aa24.1■■□□□ 1.45
PCCB-212ENST00000474833 PZPP20742 1482 aa24.09■■□□□ 1.45
PCCB-212ENST00000474833 DHX29Q7Z478 1369 aaKnown RBP24.08■■□□□ 1.45
PCCB-212ENST00000474833 TNRQ92752 1358 aa24.08■■□□□ 1.45
PCCB-212ENST00000474833 KDM5DQ9BY66 1539 aa24.08■■□□□ 1.45
PCCB-212ENST00000474833 FAM135AQ9P2D6 1515 aa24.08■■□□□ 1.45
PCCB-212ENST00000474833 MTUS2Q5JR59 1369 aa24.07■■□□□ 1.44
PCCB-212ENST00000474833 EHBP1L1Q8N3D4 1523 aa24.06■■□□□ 1.44
PCCB-212ENST00000474833 FBXO31Q5XUX0 539 aaPredicted RBP24.06■■□□□ 1.44
PCCB-212ENST00000474833 PIP4K2BP78356 416 aa24.03■■□□□ 1.44
PCCB-212ENST00000474833 DEPDC5O75140 1603 aa24.02■■□□□ 1.44
PCCB-212ENST00000474833 CEP162Q5TB80 1403 aa24.01■■□□□ 1.43
PCCB-212ENST00000474833 MED14O60244 1454 aa24.01■■□□□ 1.43
PCCB-212ENST00000474833 SCAF1Q9H7N4 1312 aaKnown RBP24■■□□□ 1.43
PCCB-212ENST00000474833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24■■□□□ 1.43
PCCB-212ENST00000474833 CCDC141Q6ZP82 1450 aa24■■□□□ 1.43
PCCB-212ENST00000474833 TOM1O60784 492 aa23.99■■□□□ 1.43
PCCB-212ENST00000474833 NLRP1Q9C000 1473 aa23.99■■□□□ 1.43
PCCB-212ENST00000474833 STRCP1A6NGW2 1772 aa23.97■■□□□ 1.43
PCCB-212ENST00000474833 KIF3BO15066 747 aa23.97■■□□□ 1.43
PCCB-212ENST00000474833 MIA2Q96PC5 1412 aa23.97■■□□□ 1.43
PCCB-212ENST00000474833 UGGT1Q9NYU2 1555 aa23.97■■□□□ 1.43
PCCB-212ENST00000474833 CAMSAP2Q08AD1 1489 aa23.96■■□□□ 1.43
PCCB-212ENST00000474833 NPHP4O75161 1426 aaPredicted RBP23.96■■□□□ 1.43
PCCB-212ENST00000474833 IQGAP1P46940 1657 aa23.95■■□□□ 1.42
PCCB-212ENST00000474833 ANKLE2Q86XL3 938 aa23.93■■□□□ 1.42
PCCB-212ENST00000474833 RNF17Q9BXT8 1623 aaKnown RBP23.92■■□□□ 1.42
PCCB-212ENST00000474833 NCOA2Q15596 1464 aa23.91■■□□□ 1.42
PCCB-212ENST00000474833 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
PCCB-212ENST00000474833 LRRC7Q96NW7 1537 aa23.9■■□□□ 1.42
PCCB-212ENST00000474833 WASHC2CQ9Y4E1 1318 aa23.9■■□□□ 1.42
PCCB-212ENST00000474833 THEMISQ8N1K5 641 aaPredicted RBP23.9■■□□□ 1.42
PCCB-212ENST00000474833 SYNMO15061 1565 aa23.9■■□□□ 1.42
PCCB-212ENST00000474833 ABCC3O15438 1527 aa23.89■■□□□ 1.41
PCCB-212ENST00000474833 ZC3H13Q5T200 1668 aaKnown RBP23.88■■□□□ 1.41
PCCB-212ENST00000474833 MROH1Q8NDA8 1641 aa23.85■■□□□ 1.41
PCCB-212ENST00000474833 ERVK-7P63135 1459 aa23.83■■□□□ 1.41
PCCB-212ENST00000474833 RSPH4AQ5TD94 716 aa23.81■■□□□ 1.4
PCCB-212ENST00000474833 MAST1Q9Y2H9 1570 aa23.81■■□□□ 1.4
PCCB-212ENST00000474833 UBR1Q8IWV7 1749 aa23.81■■□□□ 1.4
PCCB-212ENST00000474833 EIF2AK4Q9P2K8 1649 aaKnown RBP23.8■■□□□ 1.4
PCCB-212ENST00000474833 PHF23Q9BUL5 403 aaPredicted RBP23.79■■□□□ 1.4
PCCB-212ENST00000474833 XIRP1Q702N8 1843 aaKnown RBP23.76■■□□□ 1.39
PCCB-212ENST00000474833 ARHGAP23Q9P227 1491 aa23.75■■□□□ 1.39
PCCB-212ENST00000474833 CEP152O94986 1710 aa23.75■■□□□ 1.39
PCCB-212ENST00000474833 SCAF11Q99590 1463 aaKnown RBP23.75■■□□□ 1.39
PCCB-212ENST00000474833 RGS17Q9UGC6 210 aaPredicted RBP23.74■■□□□ 1.39
PCCB-212ENST00000474833 SENP3Q9H4L4 574 aaPredicted RBP23.73■■□□□ 1.39
PCCB-212ENST00000474833 SLIT1O75093 1534 aa23.73■■□□□ 1.39
PCCB-212ENST00000474833 TSPY4P0CV99 314 aa23.69■■□□□ 1.38
PCCB-212ENST00000474833 TSPY10P0CW01 314 aa23.69■■□□□ 1.38
PCCB-212ENST00000474833 LTKP29376 864 aa23.68■■□□□ 1.38
PCCB-212ENST00000474833 PRDM15P57071 1507 aaPredicted RBP23.67■■□□□ 1.38
PCCB-212ENST00000474833 LRRC9Q6ZRR7 1453 aa23.67■■□□□ 1.38
PCCB-212ENST00000474833 ARHGAP31Q2M1Z3 1444 aa23.64■■□□□ 1.37
PCCB-212ENST00000474833 CFAP65Q6ZU64 1925 aaKnown RBP23.64■■□□□ 1.37
PCCB-212ENST00000474833 DUOX2Q9NRD8 1548 aa23.63■■□□□ 1.37
PCCB-212ENST00000474833 PIK3C2BO00750 1634 aa23.62■■□□□ 1.37
PCCB-212ENST00000474833 FAM135BQ49AJ0 1406 aa23.6■■□□□ 1.37
PCCB-212ENST00000474833 MAP3K1Q13233 1512 aa23.59■■□□□ 1.37
PCCB-212ENST00000474833 TXNDC2Q86VQ3 553 aa23.58■■□□□ 1.37
PCCB-212ENST00000474833 MYOM3Q5VTT5 1437 aa23.57■■□□□ 1.36
PCCB-212ENST00000474833 TMEM2Q9UHN6 1383 aa23.56■■□□□ 1.36
PCCB-212ENST00000474833 CROCC2H7BZ55 1655 aa23.56■■□□□ 1.36
PCCB-212ENST00000474833 KDM5AP29375 1690 aaKnown RBP23.56■■□□□ 1.36
PCCB-212ENST00000474833 VPS8Q8N3P4 1428 aa23.55■■□□□ 1.36
PCCB-212ENST00000474833 ROBO1Q9Y6N7 1651 aa23.54■■□□□ 1.36
PCCB-212ENST00000474833 ERBINQ96RT1 1412 aa23.54■■□□□ 1.36
PCCB-212ENST00000474833 POTEAQ6S8J7 498 aa23.54■■□□□ 1.36
PCCB-212ENST00000474833 TET3O43151 1660 aa23.54■■□□□ 1.36
PCCB-212ENST00000474833 TMEM94Q12767 1356 aa23.53■■□□□ 1.36
PCCB-212ENST00000474833 KIF15Q9NS87 1388 aa23.53■■□□□ 1.36
PCCB-212ENST00000474833 KANK4Q5T7N3 995 aaPredicted RBP23.52■■□□□ 1.36
PCCB-212ENST00000474833 EFCAB6Q5THR3 1501 aa23.51■■□□□ 1.35
PCCB-212ENST00000474833 NWD1Q149M9 1564 aa23.51■■□□□ 1.35
PCCB-212ENST00000474833 ABCC5O15440 1437 aa23.5■■□□□ 1.35
PCCB-212ENST00000474833 EID1Q9Y6B2 187 aa23.49■■□□□ 1.35
PCCB-212ENST00000474833 LMTK2Q8IWU2 1503 aa23.49■■□□□ 1.35
PCCB-212ENST00000474833 SETD1AO15047 1707 aaKnown RBP23.46■■□□□ 1.35
PCCB-212ENST00000474833 NKTRP30414 1462 aaKnown RBP23.46■■□□□ 1.35
PCCB-212ENST00000474833 ADGRB3O60242 1522 aa23.44■■□□□ 1.34
PCCB-212ENST00000474833 KCNA6P17658 529 aa23.44■■□□□ 1.34
PCCB-212ENST00000474833 RBM33Q96EV2 1170 aaKnown RBP23.43■■□□□ 1.34
PCCB-212ENST00000474833 PTPN23Q9H3S7 1636 aa23.42■■□□□ 1.34
PCCB-212ENST00000474833 IDI1Q13907 227 aa23.42■■□□□ 1.34
PCCB-212ENST00000474833 NOS1P29475 1434 aa23.42■■□□□ 1.34
PCCB-212ENST00000474833 SLC26A8Q96RN1 970 aa23.41■■□□□ 1.34
PCCB-212ENST00000474833 RRP7BPQ9NSQ0 103 aa23.41■■□□□ 1.34
PCCB-212ENST00000474833 DAPK1P53355 1430 aa23.41■■□□□ 1.34
PCCB-212ENST00000474833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.39■■□□□ 1.33
PCCB-212ENST00000474833 PHLPP1O60346 1717 aa23.38■■□□□ 1.33
PCCB-212ENST00000474833 PROSER2Q86WR7 435 aaPredicted RBP23.37■■□□□ 1.33
PCCB-212ENST00000474833 KANK1Q14678 1352 aa23.37■■□□□ 1.33
PCCB-212ENST00000474833 COL16A1Q07092 1604 aaPredicted RBP23.37■■□□□ 1.33
PCCB-212ENST00000474833 STAG3Q9UJ98 1225 aa23.36■■□□□ 1.33
PCCB-212ENST00000474833 ZFYVE9O95405 1425 aa23.34■■□□□ 1.33
PCCB-212ENST00000474833 MSH6P52701 1360 aa23.32■■□□□ 1.32
PCCB-212ENST00000474833 JCADQ9P266 1359 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms