RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CLSPNQ9HAW4 1339 aa9.87□□□□□ -0.83
ATG4A-207ENST00000474825 ARHGEF12Q9NZN5 1544 aa9.87□□□□□ -0.83
ATG4A-207ENST00000474825 CCDC141Q6ZP82 1450 aa9.86□□□□□ -0.83
ATG4A-207ENST00000474825 ZEB1P37275 1124 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-207ENST00000474825 FARP1Q9Y4F1 1045 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-207ENST00000474825 DHX57Q6P158 1386 aaKnown RBP9.86□□□□□ -0.83
ATG4A-207ENST00000474825 MAST1Q9Y2H9 1570 aa9.85□□□□□ -0.83
ATG4A-207ENST00000474825 CD109Q6YHK3 1445 aa9.85□□□□□ -0.83
ATG4A-207ENST00000474825 HNRNPMP52272 730 aaKnown RBP eCLIP9.85□□□□□ -0.83
ATG4A-207ENST00000474825 ZNF777Q9ULD5 760 aaPredicted RBP9.85□□□□□ -0.83
ATG4A-207ENST00000474825 ABCC1P33527 1531 aa9.85□□□□□ -0.83
ATG4A-207ENST00000474825 FANCAO15360 1455 aa9.84□□□□□ -0.83
ATG4A-207ENST00000474825 CROCC2H7BZ55 1655 aa9.83□□□□□ -0.84
ATG4A-207ENST00000474825 RTEL1-TNFRSF6BF6WH68 1400 aa9.83□□□□□ -0.84
ATG4A-207ENST00000474825 C9orf84Q5VXU9 1444 aa9.83□□□□□ -0.84
ATG4A-207ENST00000474825 TSPY4P0CV99 314 aa9.83□□□□□ -0.84
ATG4A-207ENST00000474825 TSPY10P0CW01 314 aa9.83□□□□□ -0.84
ATG4A-207ENST00000474825 PLSCR2Q9NRY7 297 aa9.83□□□□□ -0.84
ATG4A-207ENST00000474825 KIF13AQ9H1H9 1805 aa9.83□□□□□ -0.84
ATG4A-207ENST00000474825 ANKRD30AQ9BXX3 1397 aa9.83□□□□□ -0.84
ATG4A-207ENST00000474825 GCC2Q8IWJ2 1684 aa9.83□□□□□ -0.84
ATG4A-207ENST00000474825 SYCP2Q9BX26 1530 aa9.82□□□□□ -0.84
ATG4A-207ENST00000474825 CCER1Q8TC90 406 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-207ENST00000474825 CHIC2Q9UKJ5 165 aa9.82□□□□□ -0.84
ATG4A-207ENST00000474825 NEO1Q92859 1461 aa9.82□□□□□ -0.84
ATG4A-207ENST00000474825 TRAPPC8Q9Y2L5 1435 aa9.82□□□□□ -0.84
ATG4A-207ENST00000474825 RRP7BPQ9NSQ0 103 aa9.81□□□□□ -0.84
ATG4A-207ENST00000474825 MAP3K4Q9Y6R4 1608 aa9.81□□□□□ -0.84
ATG4A-207ENST00000474825 DIP2BQ9P265 1576 aa9.8□□□□□ -0.84
ATG4A-207ENST00000474825 DCBLD2Q96PD2 775 aa9.8□□□□□ -0.84
ATG4A-207ENST00000474825 ADGBQ8N7X0 1667 aa9.8□□□□□ -0.84
ATG4A-207ENST00000474825 CFAP74Q9C0B2 1584 aa9.8□□□□□ -0.84
ATG4A-207ENST00000474825 SCAPERQ9BY12 1400 aa9.79□□□□□ -0.84
ATG4A-207ENST00000474825 PLXNC1O60486 1568 aa9.79□□□□□ -0.84
ATG4A-207ENST00000474825 ADGRL1O94910 1474 aa9.79□□□□□ -0.84
ATG4A-207ENST00000474825 ZNF579Q8NAF0 562 aaKnown RBP9.78□□□□□ -0.84
ATG4A-207ENST00000474825 ANKRD50Q9ULJ7 1429 aa9.78□□□□□ -0.84
ATG4A-207ENST00000474825 KDM6BO15054 1643 aa9.78□□□□□ -0.84
ATG4A-207ENST00000474825 KIF15Q9NS87 1388 aa9.77□□□□□ -0.84
ATG4A-207ENST00000474825 TSPOAP1O95153 1857 aa9.76□□□□□ -0.85
ATG4A-207ENST00000474825 KDM5CP41229 1560 aa9.76□□□□□ -0.85
ATG4A-207ENST00000474825 POGZQ7Z3K3 1410 aa9.76□□□□□ -0.85
ATG4A-207ENST00000474825 AFAP1Q8N556 730 aa9.76□□□□□ -0.85
ATG4A-207ENST00000474825 DENND4BO75064 1496 aaPredicted RBP9.76□□□□□ -0.85
ATG4A-207ENST00000474825 ZNF518AQ6AHZ1 1483 aa9.76□□□□□ -0.85
ATG4A-207ENST00000474825 MLH3Q9UHC1 1453 aa9.76□□□□□ -0.85
ATG4A-207ENST00000474825 SPAG9O60271 1321 aaKnown RBP9.76□□□□□ -0.85
ATG4A-207ENST00000474825 ZFYVE16Q7Z3T8 1539 aa9.76□□□□□ -0.85
ATG4A-207ENST00000474825 KDM5DQ9BY66 1539 aa9.75□□□□□ -0.85
ATG4A-207ENST00000474825 DUOX2Q9NRD8 1548 aa9.75□□□□□ -0.85
ATG4A-207ENST00000474825 INO80Q9ULG1 1556 aaPredicted RBP9.75□□□□□ -0.85
ATG4A-207ENST00000474825 ERBINQ96RT1 1412 aa9.74□□□□□ -0.85
ATG4A-207ENST00000474825 TEX14Q8IWB6 1497 aa9.73□□□□□ -0.85
ATG4A-207ENST00000474825 MPHOSPH9Q99550 1183 aa9.73□□□□□ -0.85
ATG4A-207ENST00000474825 PZPP20742 1482 aa9.72□□□□□ -0.85
ATG4A-207ENST00000474825 ATP7AQ04656 1500 aa9.72□□□□□ -0.85
ATG4A-207ENST00000474825 PPRC1Q5VV67 1664 aaKnown RBP9.72□□□□□ -0.85
ATG4A-207ENST00000474825 TIMELESSQ9UNS1 1208 aa9.72□□□□□ -0.85
ATG4A-207ENST00000474825 MAGI2Q86UL8 1455 aa9.72□□□□□ -0.85
ATG4A-207ENST00000474825 DHX29Q7Z478 1369 aaKnown RBP9.71□□□□□ -0.86
ATG4A-207ENST00000474825 KIDINS220Q9ULH0 1771 aa9.7□□□□□ -0.86
ATG4A-207ENST00000474825 UNC13BO14795 1591 aa9.69□□□□□ -0.86
ATG4A-207ENST00000474825 ZMYM4Q5VZL5 1548 aa9.69□□□□□ -0.86
ATG4A-207ENST00000474825 ZRANB1Q9UGI0 708 aa9.69□□□□□ -0.86
ATG4A-207ENST00000474825 RICTORQ6R327 1708 aa9.68□□□□□ -0.86
ATG4A-207ENST00000474825 FRMPD1Q5SYB0 1578 aa9.68□□□□□ -0.86
ATG4A-207ENST00000474825 ANKRD30BQ9BXX2 1392 aa9.68□□□□□ -0.86
ATG4A-207ENST00000474825 TRIM52Q96A61 297 aa9.68□□□□□ -0.86
ATG4A-207ENST00000474825 NUP155O75694 1391 aa9.67□□□□□ -0.86
ATG4A-207ENST00000474825 RAPGEF3O95398 923 aa9.67□□□□□ -0.86
ATG4A-207ENST00000474825 OTUD5Q96G74 571 aa9.67□□□□□ -0.86
ATG4A-207ENST00000474825 EIF2AK4Q9P2K8 1649 aaKnown RBP9.67□□□□□ -0.86
ATG4A-207ENST00000474825 VWDEQ8N2E2 1590 aa9.67□□□□□ -0.86
ATG4A-207ENST00000474825 HECW2Q9P2P5 1572 aa9.67□□□□□ -0.86
ATG4A-207ENST00000474825 A2MP01023 1474 aa9.66□□□□□ -0.86
ATG4A-207ENST00000474825 DEPDC5O75140 1603 aa9.66□□□□□ -0.86
ATG4A-207ENST00000474825 COL17A1Q9UMD9 1497 aaPredicted RBP9.66□□□□□ -0.86
ATG4A-207ENST00000474825 BCORL1Q5H9F3 1711 aa9.65□□□□□ -0.86
ATG4A-207ENST00000474825 ATP10AO60312 1499 aa9.65□□□□□ -0.87
ATG4A-207ENST00000474825 IQGAP3Q86VI3 1631 aa9.64□□□□□ -0.87
ATG4A-207ENST00000474825 REREQ9P2R6 1566 aa9.64□□□□□ -0.87
ATG4A-207ENST00000474825 GALR2O43603 387 aaPredicted RBP9.64□□□□□ -0.87
ATG4A-207ENST00000474825 SIN3AQ96ST3 1273 aa9.64□□□□□ -0.87
ATG4A-207ENST00000474825 FAM135AQ9P2D6 1515 aa9.64□□□□□ -0.87
ATG4A-207ENST00000474825 DIP2CQ9Y2E4 1556 aa9.63□□□□□ -0.87
ATG4A-207ENST00000474825 PRDM15P57071 1507 aaPredicted RBP9.63□□□□□ -0.87
ATG4A-207ENST00000474825 LMTK2Q8IWU2 1503 aa9.63□□□□□ -0.87
ATG4A-207ENST00000474825 PKD2Q13563 968 aa9.63□□□□□ -0.87
ATG4A-207ENST00000474825 ABCA6Q8N139 1617 aa9.63□□□□□ -0.87
ATG4A-207ENST00000474825 MROH1Q8NDA8 1641 aa9.63□□□□□ -0.87
ATG4A-207ENST00000474825 RPRD2Q5VT52 1461 aaKnown RBP9.62□□□□□ -0.87
ATG4A-207ENST00000474825 KDM4FA0A1W2PPD8 638 aa9.62□□□□□ -0.87
ATG4A-207ENST00000474825 CREBZFQ9NS37 354 aa9.62□□□□□ -0.87
ATG4A-207ENST00000474825 RNF17Q9BXT8 1623 aaKnown RBP9.62□□□□□ -0.87
ATG4A-207ENST00000474825 YEATS2Q9ULM3 1422 aa9.62□□□□□ -0.87
ATG4A-207ENST00000474825 AGLP35573 1532 aa9.61□□□□□ -0.87
ATG4A-207ENST00000474825 PLA2R1Q13018 1463 aa9.6□□□□□ -0.87
ATG4A-207ENST00000474825 PTPRTO14522 1441 aa9.6□□□□□ -0.87
ATG4A-207ENST00000474825 POTEMA6NI47 508 aa9.6□□□□□ -0.87
ATG4A-207ENST00000474825 POTEB2H3BUK9 544 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms