RNA–Protein interactions for RNA: ENST00000474734.5

CACFD1-204, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 689 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-204ENST00000474734 NCKAP5LQ9HCH0 1330 aa28.12■■■□□ 2.09
CACFD1-204ENST00000474734 DHX29Q7Z478 1369 aaKnown RBP28.11■■■□□ 2.09
CACFD1-204ENST00000474734 PTPRKQ15262 1439 aa28.11■■■□□ 2.09
CACFD1-204ENST00000474734 DNMT1P26358 1616 aaKnown RBP28.1■■■□□ 2.09
CACFD1-204ENST00000474734 LTBP4Q8N2S1 1624 aa28.1■■■□□ 2.09
CACFD1-204ENST00000474734 MYO3AQ8NEV4 1616 aa28.08■■■□□ 2.09
CACFD1-204ENST00000474734 DAPK1P53355 1430 aa28.07■■■□□ 2.08
CACFD1-204ENST00000474734 ZNF142P52746 1687 aaPredicted RBP28.05■■■□□ 2.08
CACFD1-204ENST00000474734 CEP170BQ9Y4F5 1589 aaPredicted RBP28.05■■■□□ 2.08
CACFD1-204ENST00000474734 SHANK2Q9UPX8 1470 aa28.04■■■□□ 2.08
CACFD1-204ENST00000474734 ABCC5O15440 1437 aa28.04■■■□□ 2.08
CACFD1-204ENST00000474734 PKD2Q13563 968 aa28.04■■■□□ 2.08
CACFD1-204ENST00000474734 CROCC2H7BZ55 1655 aa28.03■■■□□ 2.08
CACFD1-204ENST00000474734 KIF3BO15066 747 aa28.03■■■□□ 2.08
CACFD1-204ENST00000474734 TSPY4P0CV99 314 aa28.03■■■□□ 2.08
CACFD1-204ENST00000474734 TSPY10P0CW01 314 aa28.03■■■□□ 2.08
CACFD1-204ENST00000474734 PLA2R1Q13018 1463 aa28.02■■■□□ 2.08
CACFD1-204ENST00000474734 IQSEC2Q5JU85 1478 aa28.02■■■□□ 2.08
CACFD1-204ENST00000474734 DISP3Q9P2K9 1392 aa28■■■□□ 2.07
CACFD1-204ENST00000474734 ZNF335Q9H4Z2 1342 aaPredicted RBP28■■■□□ 2.07
CACFD1-204ENST00000474734 MAST1Q9Y2H9 1570 aa27.99■■■□□ 2.07
CACFD1-204ENST00000474734 TRIM26Q12899 539 aaPredicted RBP27.99■■■□□ 2.07
CACFD1-204ENST00000474734 A2ML1A8K2U0 1454 aa27.95■■■□□ 2.07
CACFD1-204ENST00000474734 ITGAEP38570 1179 aa27.95■■■□□ 2.06
CACFD1-204ENST00000474734 FBXO31Q5XUX0 539 aaPredicted RBP27.94■■■□□ 2.06
CACFD1-204ENST00000474734 WASHC2CQ9Y4E1 1318 aa27.93■■■□□ 2.06
CACFD1-204ENST00000474734 TNRQ92752 1358 aa27.92■■■□□ 2.06
CACFD1-204ENST00000474734 ADGRL2O95490 1459 aa27.91■■■□□ 2.06
CACFD1-204ENST00000474734 KDM5DQ9BY66 1539 aa27.91■■■□□ 2.06
CACFD1-204ENST00000474734 ROCK1Q13464 1354 aa27.89■■■□□ 2.06
CACFD1-204ENST00000474734 ANKRD30AQ9BXX3 1397 aa27.89■■■□□ 2.06
CACFD1-204ENST00000474734 UBAP1LF5GYI3 381 aa27.89■■■□□ 2.06
CACFD1-204ENST00000474734 PZPP20742 1482 aa27.89■■■□□ 2.05
CACFD1-204ENST00000474734 FAM135AQ9P2D6 1515 aa27.87■■■□□ 2.05
CACFD1-204ENST00000474734 CHIC2Q9UKJ5 165 aa27.87■■■□□ 2.05
CACFD1-204ENST00000474734 ILDR2Q71H61 639 aa27.86■■■□□ 2.05
CACFD1-204ENST00000474734 SPATA31D1Q6ZQQ2 1576 aa27.81■■■□□ 2.04
CACFD1-204ENST00000474734 KIF15Q9NS87 1388 aa27.8■■■□□ 2.04
CACFD1-204ENST00000474734 ANKLE2Q86XL3 938 aa27.79■■■□□ 2.04
CACFD1-204ENST00000474734 THEMISQ8N1K5 641 aaPredicted RBP27.79■■■□□ 2.04
CACFD1-204ENST00000474734 POLR1AO95602 1720 aaPredicted RBP27.78■■■□□ 2.04
CACFD1-204ENST00000474734 DUOX2Q9NRD8 1548 aa27.77■■■□□ 2.04
CACFD1-204ENST00000474734 RNF17Q9BXT8 1623 aaKnown RBP27.77■■■□□ 2.04
CACFD1-204ENST00000474734 NLRP1Q9C000 1473 aa27.76■■■□□ 2.04
CACFD1-204ENST00000474734 RRP7BPQ9NSQ0 103 aa27.76■■■□□ 2.03
CACFD1-204ENST00000474734 MROH1Q8NDA8 1641 aa27.76■■■□□ 2.03
CACFD1-204ENST00000474734 NEURL4Q96JN8 1562 aa27.76■■■□□ 2.03
CACFD1-204ENST00000474734 ABCC3O15438 1527 aa27.76■■■□□ 2.03
CACFD1-204ENST00000474734 HFM1A2PYH4 1435 aa27.75■■■□□ 2.03
CACFD1-204ENST00000474734 UGGT1Q9NYU2 1555 aa27.73■■■□□ 2.03
CACFD1-204ENST00000474734 GCC2Q8IWJ2 1684 aa27.73■■■□□ 2.03
CACFD1-204ENST00000474734 ERBINQ96RT1 1412 aa27.72■■■□□ 2.03
CACFD1-204ENST00000474734 SOCS7O14512 581 aa27.71■■■□□ 2.03
CACFD1-204ENST00000474734 NAIPQ13075 1403 aa27.71■■■□□ 2.03
CACFD1-204ENST00000474734 EIF2AK4Q9P2K8 1649 aaKnown RBP27.7■■■□□ 2.03
CACFD1-204ENST00000474734 SCAF1Q9H7N4 1312 aaKnown RBP27.7■■■□□ 2.03
CACFD1-204ENST00000474734 ANKRD50Q9ULJ7 1429 aa27.69■■■□□ 2.02
CACFD1-204ENST00000474734 CPS1P31327 1500 aa27.69■■■□□ 2.02
CACFD1-204ENST00000474734 ZC3H13Q5T200 1668 aaKnown RBP27.67■■■□□ 2.02
CACFD1-204ENST00000474734 NPHP4O75161 1426 aaPredicted RBP27.67■■■□□ 2.02
CACFD1-204ENST00000474734 TOM1O60784 492 aa27.66■■■□□ 2.02
CACFD1-204ENST00000474734 PIP4K2BP78356 416 aa27.66■■■□□ 2.02
CACFD1-204ENST00000474734 PCGF6Q9BYE7 350 aa27.65■■■□□ 2.02
CACFD1-204ENST00000474734 SETD5Q9C0A6 1442 aa27.65■■■□□ 2.02
CACFD1-204ENST00000474734 ERVK-7P63135 1459 aa27.64■■■□□ 2.02
CACFD1-204ENST00000474734 MED14O60244 1454 aa27.64■■■□□ 2.01
CACFD1-204ENST00000474734 DEPDC5O75140 1603 aa27.63■■■□□ 2.01
CACFD1-204ENST00000474734 VWDEQ8N2E2 1590 aa27.62■■■□□ 2.01
CACFD1-204ENST00000474734 ACIN1Q9UKV3 1341 aaKnown RBP27.61■■■□□ 2.01
CACFD1-204ENST00000474734 PRDM15P57071 1507 aaPredicted RBP27.6■■■□□ 2.01
CACFD1-204ENST00000474734 CEP152O94986 1710 aa27.59■■■□□ 2.01
CACFD1-204ENST00000474734 HSPA1LP34931 641 aa27.59■■■□□ 2.01
CACFD1-204ENST00000474734 CFAP65Q6ZU64 1925 aaKnown RBP27.59■■■□□ 2.01
CACFD1-204ENST00000474734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.58■■■□□ 2.01
CACFD1-204ENST00000474734 IQGAP1P46940 1657 aa27.58■■■□□ 2.01
CACFD1-204ENST00000474734 ARHGAP31Q2M1Z3 1444 aa27.55■■■□□ 2
CACFD1-204ENST00000474734 RAB3GAP2Q9H2M9 1393 aa27.54■■■□□ 2
CACFD1-204ENST00000474734 HRCP23327 699 aa27.53■■■□□ 2
CACFD1-204ENST00000474734 UNC13BO14795 1591 aa27.51■■□□□ 1.99
CACFD1-204ENST00000474734 UBR1Q8IWV7 1749 aa27.5■■□□□ 1.99
CACFD1-204ENST00000474734 SCAF11Q99590 1463 aaKnown RBP27.47■■□□□ 1.99
CACFD1-204ENST00000474734 TXNDC2Q86VQ3 553 aa27.47■■□□□ 1.99
CACFD1-204ENST00000474734 KANK1Q14678 1352 aa27.47■■□□□ 1.99
CACFD1-204ENST00000474734 STRCP1A6NGW2 1772 aa27.45■■□□□ 1.99
CACFD1-204ENST00000474734 LTKP29376 864 aa27.45■■□□□ 1.98
CACFD1-204ENST00000474734 LMTK2Q8IWU2 1503 aa27.45■■□□□ 1.98
CACFD1-204ENST00000474734 LRRC7Q96NW7 1537 aa27.45■■□□□ 1.98
CACFD1-204ENST00000474734 EID1Q9Y6B2 187 aa27.43■■□□□ 1.98
CACFD1-204ENST00000474734 ALKQ9UM73 1620 aa27.42■■□□□ 1.98
CACFD1-204ENST00000474734 STAG3Q9UJ98 1225 aa27.42■■□□□ 1.98
CACFD1-204ENST00000474734 MED1Q15648 1581 aaPredicted RBP27.41■■□□□ 1.98
CACFD1-204ENST00000474734 ARHGAP23Q9P227 1491 aa27.41■■□□□ 1.98
CACFD1-204ENST00000474734 NUP155O75694 1391 aa27.41■■□□□ 1.98
CACFD1-204ENST00000474734 TRIM52Q96A61 297 aa27.41■■□□□ 1.98
CACFD1-204ENST00000474734 SLIT1O75093 1534 aa27.41■■□□□ 1.98
CACFD1-204ENST00000474734 SYNMO15061 1565 aa27.4■■□□□ 1.98
CACFD1-204ENST00000474734 SENP3Q9H4L4 574 aaPredicted RBP27.4■■□□□ 1.98
CACFD1-204ENST00000474734 IQGAP3Q86VI3 1631 aa27.39■■□□□ 1.98
CACFD1-204ENST00000474734 IDI1Q13907 227 aa27.38■■□□□ 1.97
CACFD1-204ENST00000474734 PIK3C2BO00750 1634 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms