RNA–Protein interactions for RNA: ENST00000474627.7

ATPAF2-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF2, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-206ENST00000474627 ADGRL2O95490 1459 aa29.61■■■□□ 2.33
ATPAF2-206ENST00000474627 PPP6R1Q9UPN7 881 aa29.61■■■□□ 2.33
ATPAF2-206ENST00000474627 CNTLNQ9NXG0 1405 aa29.61■■■□□ 2.33
ATPAF2-206ENST00000474627 ERBINQ96RT1 1412 aa29.57■■■□□ 2.32
ATPAF2-206ENST00000474627 EIF2AK4Q9P2K8 1649 aaKnown RBP29.55■■■□□ 2.32
ATPAF2-206ENST00000474627 ZMYM3Q14202 1370 aa29.54■■■□□ 2.32
ATPAF2-206ENST00000474627 CLTCQ00610 1675 aaKnown RBP29.53■■■□□ 2.32
ATPAF2-206ENST00000474627 WASHC2CQ9Y4E1 1318 aa29.52■■■□□ 2.32
ATPAF2-206ENST00000474627 ROCK1Q13464 1354 aa29.52■■■□□ 2.32
ATPAF2-206ENST00000474627 RNF17Q9BXT8 1623 aaKnown RBP29.5■■■□□ 2.31
ATPAF2-206ENST00000474627 C3P01024 1663 aa29.49■■■□□ 2.31
ATPAF2-206ENST00000474627 MROH2AA6NES4 1674 aa29.48■■■□□ 2.31
ATPAF2-206ENST00000474627 KDM5DQ9BY66 1539 aa29.48■■■□□ 2.31
ATPAF2-206ENST00000474627 ANKRD50Q9ULJ7 1429 aa29.47■■■□□ 2.31
ATPAF2-206ENST00000474627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.46■■■□□ 2.316e-6■□□□□ 8.2
ATPAF2-206ENST00000474627 MROH1Q8NDA8 1641 aa29.45■■■□□ 2.3
ATPAF2-206ENST00000474627 FAM135AQ9P2D6 1515 aa29.44■■■□□ 2.3
ATPAF2-206ENST00000474627 ABCC3O15438 1527 aa29.4■■■□□ 2.3
ATPAF2-206ENST00000474627 PRDM15P57071 1507 aaPredicted RBP29.39■■■□□ 2.29
ATPAF2-206ENST00000474627 LMTK3Q96Q04 1460 aa29.38■■■□□ 2.29
ATPAF2-206ENST00000474627 KANK1Q14678 1352 aa29.37■■■□□ 2.29
ATPAF2-206ENST00000474627 NPATQ14207 1427 aa29.37■■■□□ 2.29
ATPAF2-206ENST00000474627 DEPDC5O75140 1603 aa29.37■■■□□ 2.29
ATPAF2-206ENST00000474627 HRCP23327 699 aa29.37■■■□□ 2.29
ATPAF2-206ENST00000474627 FBXO31Q5XUX0 539 aaPredicted RBP29.35■■■□□ 2.29
ATPAF2-206ENST00000474627 ZC3H13Q5T200 1668 aaKnown RBP29.34■■■□□ 2.29
ATPAF2-206ENST00000474627 PZPP20742 1482 aa29.33■■■□□ 2.29
ATPAF2-206ENST00000474627 UHRF1BP1Q6BDS2 1440 aa29.33■■■□□ 2.29
ATPAF2-206ENST00000474627 SETD1BQ9UPS6 1966 aaKnown RBP29.32■■■□□ 2.28
ATPAF2-206ENST00000474627 CEP152O94986 1710 aa29.31■■■□□ 2.28
ATPAF2-206ENST00000474627 PREX1Q8TCU6 1659 aa29.31■■■□□ 2.28
ATPAF2-206ENST00000474627 HSPA2P54652 639 aa29.3■■■□□ 2.28
ATPAF2-206ENST00000474627 NAIPQ13075 1403 aa29.28■■■□□ 2.28
ATPAF2-206ENST00000474627 VWDEQ8N2E2 1590 aa29.27■■■□□ 2.28
ATPAF2-206ENST00000474627 CAMSAP1Q5T5Y3 1602 aa29.27■■■□□ 2.28
ATPAF2-206ENST00000474627 TNRQ92752 1358 aa29.25■■■□□ 2.27
ATPAF2-206ENST00000474627 HFM1A2PYH4 1435 aa29.24■■■□□ 2.27
ATPAF2-206ENST00000474627 LMTK2Q8IWU2 1503 aa29.24■■■□□ 2.27
ATPAF2-206ENST00000474627 UNC13BO14795 1591 aa29.23■■■□□ 2.27
ATPAF2-206ENST00000474627 ARHGAP31Q2M1Z3 1444 aa29.23■■■□□ 2.27
ATPAF2-206ENST00000474627 NUP155O75694 1391 aa29.2■■■□□ 2.27
ATPAF2-206ENST00000474627 GCC2Q8IWJ2 1684 aa29.19■■■□□ 2.26
ATPAF2-206ENST00000474627 ERVK-7P63135 1459 aa29.19■■■□□ 2.26
ATPAF2-206ENST00000474627 MYO3AQ8NEV4 1616 aa29.19■■■□□ 2.26
ATPAF2-206ENST00000474627 SPATA31D1Q6ZQQ2 1576 aa29.16■■■□□ 2.26
ATPAF2-206ENST00000474627 EFCAB6Q5THR3 1501 aa29.14■■■□□ 2.26
ATPAF2-206ENST00000474627 CFAP65Q6ZU64 1925 aaKnown RBP29.14■■■□□ 2.25
ATPAF2-206ENST00000474627 CEP170BQ9Y4F5 1589 aaPredicted RBP29.13■■■□□ 2.25
ATPAF2-206ENST00000474627 A2ML1A8K2U0 1454 aa29.12■■■□□ 2.25
ATPAF2-206ENST00000474627 IQGAP3Q86VI3 1631 aa29.11■■■□□ 2.25
ATPAF2-206ENST00000474627 TET3O43151 1660 aa29.1■■■□□ 2.25
ATPAF2-206ENST00000474627 NLRP1Q9C000 1473 aa29.1■■■□□ 2.25
ATPAF2-206ENST00000474627 TRIM52Q96A61 297 aa29.09■■■□□ 2.25
ATPAF2-206ENST00000474627 ZNF142P52746 1687 aaPredicted RBP29.09■■■□□ 2.25
ATPAF2-206ENST00000474627 RPRD2Q5VT52 1461 aaKnown RBP29.07■■■□□ 2.24
ATPAF2-206ENST00000474627 NOS1P29475 1434 aa29.04■■■□□ 2.24
ATPAF2-206ENST00000474627 ZEB1P37275 1124 aaPredicted RBP29.04■■■□□ 2.24
ATPAF2-206ENST00000474627 SETD5Q9C0A6 1442 aa29.02■■■□□ 2.24
ATPAF2-206ENST00000474627 UGGT1Q9NYU2 1555 aa29.01■■■□□ 2.23
ATPAF2-206ENST00000474627 THEMISQ8N1K5 641 aaPredicted RBP29.01■■■□□ 2.23
ATPAF2-206ENST00000474627 E9PCH4 1651 aa29■■■□□ 2.23
ATPAF2-206ENST00000474627 IDI1Q13907 227 aa28.99■■■□□ 2.23
ATPAF2-206ENST00000474627 SYNMO15061 1565 aa28.99■■■□□ 2.23
ATPAF2-206ENST00000474627 STRCQ7RTU9 1775 aa28.98■■■□□ 2.23
ATPAF2-206ENST00000474627 NCKAP5LQ9HCH0 1330 aa28.97■■■□□ 2.23
ATPAF2-206ENST00000474627 PLA2R1Q13018 1463 aa28.96■■■□□ 2.23
ATPAF2-206ENST00000474627 SLC52A1Q9NWF4 448 aa28.96■■■□□ 2.23
ATPAF2-206ENST00000474627 SLC4A1APQ9BWU0 796 aaKnown RBP28.95■■■□□ 2.22
ATPAF2-206ENST00000474627 STAG3Q9UJ98 1225 aa28.95■■■□□ 2.22
ATPAF2-206ENST00000474627 DMRT2Q9Y5R5 561 aa28.95■■■□□ 2.22
ATPAF2-206ENST00000474627 RAB3GAP2Q9H2M9 1393 aa28.93■■■□□ 2.22
ATPAF2-206ENST00000474627 PKD2Q13563 968 aa28.92■■■□□ 2.22
ATPAF2-206ENST00000474627 PIK3C2BO00750 1634 aa28.91■■■□□ 2.22
ATPAF2-206ENST00000474627 UBR1Q8IWV7 1749 aa28.89■■■□□ 2.22
ATPAF2-206ENST00000474627 ANKLE2Q86XL3 938 aa28.89■■■□□ 2.22
ATPAF2-206ENST00000474627 ACIN1Q9UKV3 1341 aaKnown RBP28.88■■■□□ 2.21
ATPAF2-206ENST00000474627 MPHOSPH9Q99550 1183 aa28.86■■■□□ 2.21
ATPAF2-206ENST00000474627 PTPRTO14522 1441 aa28.86■■■□□ 2.21
ATPAF2-206ENST00000474627 CHGAP10645 457 aaKnown RBP28.83■■■□□ 2.21
ATPAF2-206ENST00000474627 FOXD1Q16676 465 aa28.82■■■□□ 2.2
ATPAF2-206ENST00000474627 ADGRB3O60242 1522 aa28.82■■■□□ 2.2
ATPAF2-206ENST00000474627 SPHKAPQ2M3C7 1700 aa28.8■■■□□ 2.2
ATPAF2-206ENST00000474627 TMEM2Q9UHN6 1383 aa28.8■■■□□ 2.2
ATPAF2-206ENST00000474627 KDM5AP29375 1690 aaKnown RBP28.8■■■□□ 2.2
ATPAF2-206ENST00000474627 TXNDC2Q86VQ3 553 aa28.79■■■□□ 2.2
ATPAF2-206ENST00000474627 ARHGAP23Q9P227 1491 aa28.79■■■□□ 2.2
ATPAF2-206ENST00000474627 SLIT1O75093 1534 aa28.78■■■□□ 2.2
ATPAF2-206ENST00000474627 LTKP29376 864 aa28.78■■■□□ 2.2
ATPAF2-206ENST00000474627 EID1Q9Y6B2 187 aa28.78■■■□□ 2.2
ATPAF2-206ENST00000474627 POLR1AO95602 1720 aaPredicted RBP28.77■■■□□ 2.2
ATPAF2-206ENST00000474627 NEURL4Q96JN8 1562 aa28.77■■■□□ 2.2
ATPAF2-206ENST00000474627 TRPM2O94759 1503 aa28.75■■■□□ 2.19
ATPAF2-206ENST00000474627 TMEM131LA2VDJ0 1609 aa28.75■■■□□ 2.19
ATPAF2-206ENST00000474627 SCAF11Q99590 1463 aaKnown RBP28.75■■■□□ 2.19
ATPAF2-206ENST00000474627 NPHP4O75161 1426 aaPredicted RBP28.74■■■□□ 2.19
ATPAF2-206ENST00000474627 MED14O60244 1454 aa28.73■■■□□ 2.19
ATPAF2-206ENST00000474627 CLTCL1P53675 1640 aa28.7■■■□□ 2.18
ATPAF2-206ENST00000474627 CCER1Q8TC90 406 aaPredicted RBP28.69■■■□□ 2.18
ATPAF2-206ENST00000474627 MYO5BQ9ULV0 1848 aa28.69■■■□□ 2.18
ATPAF2-206ENST00000474627 RIMS2Q9UQ26 1411 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms