RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 MROH2AA6NES4 1674 aa24.62■■□□□ 1.53
ITGB1-210ENST00000474568 DUOX2Q9NRD8 1548 aa24.61■■□□□ 1.53
ITGB1-210ENST00000474568 PREX1Q8TCU6 1659 aa24.61■■□□□ 1.53
ITGB1-210ENST00000474568 ANKRD30AQ9BXX3 1397 aa24.6■■□□□ 1.53
ITGB1-210ENST00000474568 KDM5DQ9BY66 1539 aa24.59■■□□□ 1.53
ITGB1-210ENST00000474568 PTPRKQ15262 1439 aa24.59■■□□□ 1.53
ITGB1-210ENST00000474568 ITGAEP38570 1179 aa24.57■■□□□ 1.52
ITGB1-210ENST00000474568 FBXO31Q5XUX0 539 aaPredicted RBP24.57■■□□□ 1.52
ITGB1-210ENST00000474568 NPATQ14207 1427 aa24.57■■□□□ 1.52
ITGB1-210ENST00000474568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.56■■□□□ 1.521e-12■□□□□ 10
ITGB1-210ENST00000474568 NCOA1Q15788 1441 aa24.55■■□□□ 1.52
ITGB1-210ENST00000474568 EIF2AK4Q9P2K8 1649 aaKnown RBP24.54■■□□□ 1.52
ITGB1-210ENST00000474568 ERBINQ96RT1 1412 aa24.54■■□□□ 1.52
ITGB1-210ENST00000474568 RNF17Q9BXT8 1623 aaKnown RBP24.53■■□□□ 1.52
ITGB1-210ENST00000474568 SETD1BQ9UPS6 1966 aaKnown RBP24.52■■□□□ 1.52
ITGB1-210ENST00000474568 ADGRL2O95490 1459 aa24.51■■□□□ 1.51
ITGB1-210ENST00000474568 ABCC3O15438 1527 aa24.51■■□□□ 1.51
ITGB1-210ENST00000474568 MROH1Q8NDA8 1641 aa24.5■■□□□ 1.51
ITGB1-210ENST00000474568 FAM135AQ9P2D6 1515 aa24.5■■□□□ 1.51
ITGB1-210ENST00000474568 PZPP20742 1482 aa24.49■■□□□ 1.51
ITGB1-210ENST00000474568 TNRQ92752 1358 aa24.48■■□□□ 1.51
ITGB1-210ENST00000474568 MYO3AQ8NEV4 1616 aa24.45■■□□□ 1.5
ITGB1-210ENST00000474568 ANKRD50Q9ULJ7 1429 aa24.44■■□□□ 1.5
ITGB1-210ENST00000474568 KANK1Q14678 1352 aa24.42■■□□□ 1.5
ITGB1-210ENST00000474568 PRDM15P57071 1507 aaPredicted RBP24.42■■□□□ 1.5
ITGB1-210ENST00000474568 CEP152O94986 1710 aa24.42■■□□□ 1.5
ITGB1-210ENST00000474568 ZC3H13Q5T200 1668 aaKnown RBP24.41■■□□□ 1.5
ITGB1-210ENST00000474568 CEP170BQ9Y4F5 1589 aaPredicted RBP24.41■■□□□ 1.5
ITGB1-210ENST00000474568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.41■■□□□ 1.5
ITGB1-210ENST00000474568 CAMSAP1Q5T5Y3 1602 aa24.39■■□□□ 1.5
ITGB1-210ENST00000474568 RRBP1Q9P2E9 1410 aaKnown RBP24.39■■□□□ 1.5
ITGB1-210ENST00000474568 NCKAP5LQ9HCH0 1330 aa24.38■■□□□ 1.49
ITGB1-210ENST00000474568 ROCK1Q13464 1354 aa24.38■■□□□ 1.49
ITGB1-210ENST00000474568 A2ML1A8K2U0 1454 aa24.38■■□□□ 1.49
ITGB1-210ENST00000474568 DEPDC5O75140 1603 aa24.37■■□□□ 1.49
ITGB1-210ENST00000474568 ERVK-7P63135 1459 aa24.37■■□□□ 1.49
ITGB1-210ENST00000474568 STRCQ7RTU9 1775 aa24.37■■□□□ 1.49
ITGB1-210ENST00000474568 ZNF142P52746 1687 aaPredicted RBP24.36■■□□□ 1.49
ITGB1-210ENST00000474568 DMRT2Q9Y5R5 561 aa24.35■■□□□ 1.49
ITGB1-210ENST00000474568 SPATA31D1Q6ZQQ2 1576 aa24.32■■□□□ 1.48
ITGB1-210ENST00000474568 ARHGAP31Q2M1Z3 1444 aa24.31■■□□□ 1.48
ITGB1-210ENST00000474568 NLRP1Q9C000 1473 aa24.31■■□□□ 1.48
ITGB1-210ENST00000474568 VWDEQ8N2E2 1590 aa24.3■■□□□ 1.48
ITGB1-210ENST00000474568 LMTK2Q8IWU2 1503 aa24.29■■□□□ 1.48
ITGB1-210ENST00000474568 PTPRTO14522 1441 aa24.28■■□□□ 1.48
ITGB1-210ENST00000474568 PLA2R1Q13018 1463 aa24.28■■□□□ 1.48
ITGB1-210ENST00000474568 CFAP65Q6ZU64 1925 aaKnown RBP24.27■■□□□ 1.48
ITGB1-210ENST00000474568 UGGT1Q9NYU2 1555 aa24.26■■□□□ 1.47
ITGB1-210ENST00000474568 PKD2Q13563 968 aa24.26■■□□□ 1.47
ITGB1-210ENST00000474568 ILDR1Q86SU0 546 aaPredicted RBP24.26■■□□□ 1.47
ITGB1-210ENST00000474568 THEMISQ8N1K5 641 aaPredicted RBP24.26■■□□□ 1.47
ITGB1-210ENST00000474568 EFCAB6Q5THR3 1501 aa24.23■■□□□ 1.47
ITGB1-210ENST00000474568 NUP155O75694 1391 aa24.22■■□□□ 1.47
ITGB1-210ENST00000474568 UNC13BO14795 1591 aa24.21■■□□□ 1.47
ITGB1-210ENST00000474568 ANKLE2Q86XL3 938 aa24.2■■□□□ 1.46
ITGB1-210ENST00000474568 CERKQ8TCT0 537 aa24.19■■□□□ 1.46
ITGB1-210ENST00000474568 STAG3Q9UJ98 1225 aa24.19■■□□□ 1.46
ITGB1-210ENST00000474568 NAIPQ13075 1403 aa24.18■■□□□ 1.46
ITGB1-210ENST00000474568 IDI1Q13907 227 aa24.17■■□□□ 1.46
ITGB1-210ENST00000474568 NOS1P29475 1434 aa24.16■■□□□ 1.46
ITGB1-210ENST00000474568 ZNF335Q9H4Z2 1342 aaPredicted RBP24.15■■□□□ 1.46
ITGB1-210ENST00000474568 SYNMO15061 1565 aa24.15■■□□□ 1.46
ITGB1-210ENST00000474568 TET3O43151 1660 aa24.15■■□□□ 1.46
ITGB1-210ENST00000474568 NEURL4Q96JN8 1562 aa24.13■■□□□ 1.45
ITGB1-210ENST00000474568 FBXO41Q8TF61 875 aa24.12■■□□□ 1.45
ITGB1-210ENST00000474568 PIK3C2BO00750 1634 aa24.12■■□□□ 1.45
ITGB1-210ENST00000474568 RPRD2Q5VT52 1461 aaKnown RBP24.12■■□□□ 1.45
ITGB1-210ENST00000474568 IQGAP3Q86VI3 1631 aa24.11■■□□□ 1.45
ITGB1-210ENST00000474568 UBR1Q8IWV7 1749 aa24.11■■□□□ 1.45
ITGB1-210ENST00000474568 HFM1A2PYH4 1435 aa24.1■■□□□ 1.45
ITGB1-210ENST00000474568 NPHP4O75161 1426 aaPredicted RBP24.1■■□□□ 1.45
ITGB1-210ENST00000474568 TRIM52Q96A61 297 aa24.1■■□□□ 1.45
ITGB1-210ENST00000474568 TXNDC2Q86VQ3 553 aa24.09■■□□□ 1.45
ITGB1-210ENST00000474568 POLR1AO95602 1720 aaPredicted RBP24.09■■□□□ 1.45
ITGB1-210ENST00000474568 LTKP29376 864 aa24.08■■□□□ 1.45
ITGB1-210ENST00000474568 SLC52A1Q9NWF4 448 aa24.08■■□□□ 1.45
ITGB1-210ENST00000474568 GCC2Q8IWJ2 1684 aa24.08■■□□□ 1.44
ITGB1-210ENST00000474568 LTBP4Q8N2S1 1624 aa24.07■■□□□ 1.44
ITGB1-210ENST00000474568 CHGAP10645 457 aaKnown RBP24.07■■□□□ 1.44
ITGB1-210ENST00000474568 E9PCH4 1651 aa24.06■■□□□ 1.44
ITGB1-210ENST00000474568 EID1Q9Y6B2 187 aa24.05■■□□□ 1.44
ITGB1-210ENST00000474568 SCAF11Q99590 1463 aaKnown RBP24.05■■□□□ 1.44
ITGB1-210ENST00000474568 TMEM2Q9UHN6 1383 aa24.04■■□□□ 1.44
ITGB1-210ENST00000474568 MED14O60244 1454 aa24.04■■□□□ 1.44
ITGB1-210ENST00000474568 ARHGAP23Q9P227 1491 aa24.04■■□□□ 1.44
ITGB1-210ENST00000474568 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
ITGB1-210ENST00000474568 ADGRB3O60242 1522 aa24.03■■□□□ 1.44
ITGB1-210ENST00000474568 SLIT1O75093 1534 aa24.03■■□□□ 1.44
ITGB1-210ENST00000474568 IQGAP1P46940 1657 aa23.99■■□□□ 1.43
ITGB1-210ENST00000474568 SLC4A1APQ9BWU0 796 aaKnown RBP23.96■■□□□ 1.43
ITGB1-210ENST00000474568 BCANQ96GW7 911 aa23.95■■□□□ 1.42
ITGB1-210ENST00000474568 NUTM2DQ5VT03 806 aaPredicted RBP23.94■■□□□ 1.42
ITGB1-210ENST00000474568 KDM5AP29375 1690 aaKnown RBP23.93■■□□□ 1.42
ITGB1-210ENST00000474568 PPP1R15AO75807 674 aaPredicted RBP23.93■■□□□ 1.42
ITGB1-210ENST00000474568 RIMS2Q9UQ26 1411 aa23.93■■□□□ 1.42
ITGB1-210ENST00000474568 SLC26A8Q96RN1 970 aa23.92■■□□□ 1.42
ITGB1-210ENST00000474568 TMEM131LA2VDJ0 1609 aa23.92■■□□□ 1.42
ITGB1-210ENST00000474568 FOXD1Q16676 465 aa23.9■■□□□ 1.42
ITGB1-210ENST00000474568 ZFYVE9O95405 1425 aa23.89■■□□□ 1.41
ITGB1-210ENST00000474568 SETD5Q9C0A6 1442 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms