RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 RIMS1Q86UR5 1692 aaKnown RBP30.1■■■□□ 2.41
CDHR3-210ENST00000474330 ANKRD50Q9ULJ7 1429 aa30.07■■■□□ 2.41
CDHR3-210ENST00000474330 ZEB1P37275 1124 aaPredicted RBP30.06■■■□□ 2.4
CDHR3-210ENST00000474330 FER1L4A9Z1Z3 1794 aa30.05■■■□□ 2.4
CDHR3-210ENST00000474330 AGLP35573 1532 aa30.04■■■□□ 2.4
CDHR3-210ENST00000474330 CLSPNQ9HAW4 1339 aa30.04■■■□□ 2.4
CDHR3-210ENST00000474330 DUOX2Q9NRD8 1548 aa30.01■■■□□ 2.39
CDHR3-210ENST00000474330 TRIM52Q96A61 297 aa29.96■■■□□ 2.39
CDHR3-210ENST00000474330 A2MP01023 1474 aa29.94■■■□□ 2.38
CDHR3-210ENST00000474330 ERBINQ96RT1 1412 aa29.93■■■□□ 2.38
CDHR3-210ENST00000474330 EIF2AK4Q9P2K8 1649 aaKnown RBP29.9■■■□□ 2.38
CDHR3-210ENST00000474330 DHX29Q7Z478 1369 aaKnown RBP29.89■■■□□ 2.38
CDHR3-210ENST00000474330 PLPPR3Q6T4P5 718 aa29.89■■■□□ 2.37
CDHR3-210ENST00000474330 MPHOSPH9Q99550 1183 aa29.86■■■□□ 2.37
CDHR3-210ENST00000474330 CEBPAP49715 358 aaPredicted RBP29.85■■■□□ 2.37
CDHR3-210ENST00000474330 KDM5DQ9BY66 1539 aa29.85■■■□□ 2.37
CDHR3-210ENST00000474330 UNC13BO14795 1591 aa29.84■■■□□ 2.37
CDHR3-210ENST00000474330 PZPP20742 1482 aa29.83■■■□□ 2.37
CDHR3-210ENST00000474330 NUP155O75694 1391 aa29.81■■■□□ 2.36
CDHR3-210ENST00000474330 C3P01024 1663 aa29.8■■■□□ 2.36
CDHR3-210ENST00000474330 SLC4A1APQ9BWU0 796 aaKnown RBP29.79■■■□□ 2.36
CDHR3-210ENST00000474330 DEPDC5O75140 1603 aa29.79■■■□□ 2.36
CDHR3-210ENST00000474330 LMTK3Q96Q04 1460 aa29.79■■■□□ 2.36
CDHR3-210ENST00000474330 GGT6Q6P531 493 aa29.77■■■□□ 2.36
CDHR3-210ENST00000474330 RNF17Q9BXT8 1623 aaKnown RBP29.76■■■□□ 2.35
CDHR3-210ENST00000474330 ESF1Q9H501 851 aaKnown RBP29.74■■■□□ 2.35
CDHR3-210ENST00000474330 CNTLNQ9NXG0 1405 aa29.74■■■□□ 2.35
CDHR3-210ENST00000474330 KIF3BO15066 747 aa29.74■■■□□ 2.35
CDHR3-210ENST00000474330 CLTCQ00610 1675 aaKnown RBP29.73■■■□□ 2.35
CDHR3-210ENST00000474330 MROH2AA6NES4 1674 aa29.72■■■□□ 2.35
CDHR3-210ENST00000474330 IQGAP3Q86VI3 1631 aa29.72■■■□□ 2.35
CDHR3-210ENST00000474330 SETD1BQ9UPS6 1966 aaKnown RBP29.72■■■□□ 2.35
CDHR3-210ENST00000474330 FAM135AQ9P2D6 1515 aa29.72■■■□□ 2.35
CDHR3-210ENST00000474330 MROH1Q8NDA8 1641 aa29.71■■■□□ 2.35
CDHR3-210ENST00000474330 PRDM15P57071 1507 aaPredicted RBP29.71■■■□□ 2.35
CDHR3-210ENST00000474330 ZMYM3Q14202 1370 aa29.69■■■□□ 2.34
CDHR3-210ENST00000474330 PPP6R1Q9UPN7 881 aa29.68■■■□□ 2.34
CDHR3-210ENST00000474330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.67■■■□□ 2.34
CDHR3-210ENST00000474330 PREX1Q8TCU6 1659 aa29.67■■■□□ 2.34
CDHR3-210ENST00000474330 SIN3AQ96ST3 1273 aa29.66■■■□□ 2.34
CDHR3-210ENST00000474330 PKD2Q13563 968 aa29.65■■■□□ 2.34
CDHR3-210ENST00000474330 FOXD1Q16676 465 aa29.64■■■□□ 2.34
CDHR3-210ENST00000474330 HSPA2P54652 639 aa29.63■■■□□ 2.33
CDHR3-210ENST00000474330 ANKRD30BQ9BXX2 1392 aa29.63■■■□□ 2.33
CDHR3-210ENST00000474330 VWDEQ8N2E2 1590 aa29.63■■■□□ 2.33
CDHR3-210ENST00000474330 KANK1Q14678 1352 aa29.62■■■□□ 2.33
CDHR3-210ENST00000474330 CEP152O94986 1710 aa29.6■■■□□ 2.33
CDHR3-210ENST00000474330 NEUROD1Q13562 356 aa29.59■■■□□ 2.33
CDHR3-210ENST00000474330 ZC3H13Q5T200 1668 aaKnown RBP29.58■■■□□ 2.33
CDHR3-210ENST00000474330 TIMELESSQ9UNS1 1208 aa29.58■■■□□ 2.33
CDHR3-210ENST00000474330 TET3O43151 1660 aa29.56■■■□□ 2.32
CDHR3-210ENST00000474330 NPATQ14207 1427 aa29.56■■■□□ 2.32
CDHR3-210ENST00000474330 UHRF1BP1Q6BDS2 1440 aa29.54■■■□□ 2.32
CDHR3-210ENST00000474330 WASHC2CQ9Y4E1 1318 aa29.53■■■□□ 2.32
CDHR3-210ENST00000474330 LMTK2Q8IWU2 1503 aa29.53■■■□□ 2.32
CDHR3-210ENST00000474330 ABCC3O15438 1527 aa29.52■■■□□ 2.32
CDHR3-210ENST00000474330 CAMSAP1Q5T5Y3 1602 aa29.49■■■□□ 2.31
CDHR3-210ENST00000474330 RPRD2Q5VT52 1461 aaKnown RBP29.48■■■□□ 2.31
CDHR3-210ENST00000474330 E9PCH4 1651 aa29.48■■■□□ 2.31
CDHR3-210ENST00000474330 EFCAB6Q5THR3 1501 aa29.47■■■□□ 2.31
CDHR3-210ENST00000474330 FBXO31Q5XUX0 539 aaPredicted RBP29.45■■■□□ 2.31
CDHR3-210ENST00000474330 STRCQ7RTU9 1775 aa29.45■■■□□ 2.3
CDHR3-210ENST00000474330 TONSLQ96HA7 1378 aa29.44■■■□□ 2.3
CDHR3-210ENST00000474330 MYO3AQ8NEV4 1616 aa29.42■■■□□ 2.3
CDHR3-210ENST00000474330 PLA2R1Q13018 1463 aa29.41■■■□□ 2.3
CDHR3-210ENST00000474330 ZNF142P52746 1687 aaPredicted RBP29.38■■■□□ 2.29
CDHR3-210ENST00000474330 SPHKAPQ2M3C7 1700 aa29.37■■■□□ 2.29
CDHR3-210ENST00000474330 CFAP65Q6ZU64 1925 aaKnown RBP29.37■■■□□ 2.29
CDHR3-210ENST00000474330 PTPRTO14522 1441 aa29.36■■■□□ 2.29
CDHR3-210ENST00000474330 ARHGAP31Q2M1Z3 1444 aa29.35■■■□□ 2.29
CDHR3-210ENST00000474330 CEP170BQ9Y4F5 1589 aaPredicted RBP29.34■■■□□ 2.29
CDHR3-210ENST00000474330 CCDC144AA2RUR9 1427 aa29.34■■■□□ 2.29
CDHR3-210ENST00000474330 PPP1R15AO75807 674 aaPredicted RBP29.34■■■□□ 2.29
CDHR3-210ENST00000474330 TNRQ92752 1358 aa29.33■■■□□ 2.29
CDHR3-210ENST00000474330 TRPM2O94759 1503 aa29.32■■■□□ 2.28
CDHR3-210ENST00000474330 SPATA31D1Q6ZQQ2 1576 aa29.29■■■□□ 2.28
CDHR3-210ENST00000474330 A2ML1A8K2U0 1454 aa29.29■■■□□ 2.28
CDHR3-210ENST00000474330 L3MBTL2Q969R5 705 aa29.28■■■□□ 2.28
CDHR3-210ENST00000474330 ERVK-7P63135 1459 aa29.25■■■□□ 2.27
CDHR3-210ENST00000474330 DMRT2Q9Y5R5 561 aa29.23■■■□□ 2.27
CDHR3-210ENST00000474330 NOS1P29475 1434 aa29.21■■■□□ 2.27
CDHR3-210ENST00000474330 NLRP1Q9C000 1473 aa29.21■■■□□ 2.27
CDHR3-210ENST00000474330 CLTCL1P53675 1640 aa29.21■■■□□ 2.27
CDHR3-210ENST00000474330 NCKAP5LQ9HCH0 1330 aa29.2■■■□□ 2.27
CDHR3-210ENST00000474330 SYNMO15061 1565 aa29.19■■■□□ 2.26
CDHR3-210ENST00000474330 PIK3C2BO00750 1634 aa29.15■■■□□ 2.26
CDHR3-210ENST00000474330 UGGT1Q9NYU2 1555 aa29.14■■■□□ 2.26
CDHR3-210ENST00000474330 KIF1BO60333 1816 aa29.14■■■□□ 2.26
CDHR3-210ENST00000474330 SPATA31E1Q6ZUB1 1445 aa29.13■■■□□ 2.25
CDHR3-210ENST00000474330 NEURL4Q96JN8 1562 aa29.13■■■□□ 2.25
CDHR3-210ENST00000474330 THEMISQ8N1K5 641 aaPredicted RBP29.11■■■□□ 2.25
CDHR3-210ENST00000474330 UBR1Q8IWV7 1749 aa29.09■■■□□ 2.25
CDHR3-210ENST00000474330 RGL3Q3MIN7 710 aa29.08■■■□□ 2.25
CDHR3-210ENST00000474330 POLR1AO95602 1720 aaPredicted RBP29.07■■■□□ 2.24
CDHR3-210ENST00000474330 ILDR1Q86SU0 546 aaPredicted RBP29.06■■■□□ 2.24
CDHR3-210ENST00000474330 DCAF11Q8TEB1 546 aa29.06■■■□□ 2.24
CDHR3-210ENST00000474330 NBPF8Q3BBV2 869 aa29.05■■■□□ 2.24
CDHR3-210ENST00000474330 SLC52A1Q9NWF4 448 aa29.04■■■□□ 2.24
CDHR3-210ENST00000474330 IDI1Q13907 227 aa29.03■■■□□ 2.24
CDHR3-210ENST00000474330 ANKLE2Q86XL3 938 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms