RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 MADDQ8WXG6 1647 aa15.65■□□□□ 0.1
CASC3-204ENST00000474190 SETD5Q9C0A6 1442 aa15.65■□□□□ 0.1
CASC3-204ENST00000474190 VWDEQ8N2E2 1590 aa15.64■□□□□ 0.09
CASC3-204ENST00000474190 RNF17Q9BXT8 1623 aaKnown RBP15.64■□□□□ 0.09
CASC3-204ENST00000474190 EIF2AK4Q9P2K8 1649 aaKnown RBP15.63■□□□□ 0.09
CASC3-204ENST00000474190 RAB3GAP2Q9H2M9 1393 aa15.62■□□□□ 0.09
CASC3-204ENST00000474190 MLECQ14165 292 aa15.62■□□□□ 0.09
CASC3-204ENST00000474190 GCC2Q8IWJ2 1684 aa15.62■□□□□ 0.09
CASC3-204ENST00000474190 PRDM15P57071 1507 aaPredicted RBP15.62■□□□□ 0.09
CASC3-204ENST00000474190 ARID4BQ4LE39 1312 aaPredicted RBP15.62■□□□□ 0.09
CASC3-204ENST00000474190 DEPDC5O75140 1603 aa15.61■□□□□ 0.09
CASC3-204ENST00000474190 GGT6Q6P531 493 aa15.61■□□□□ 0.09
CASC3-204ENST00000474190 KDM5DQ9BY66 1539 aa15.61■□□□□ 0.09
CASC3-204ENST00000474190 HRCP23327 699 aa15.59■□□□□ 0.09
CASC3-204ENST00000474190 UNC13BO14795 1591 aa15.58■□□□□ 0.09
CASC3-204ENST00000474190 RIMS1Q86UR5 1692 aaKnown RBP15.58■□□□□ 0.08
CASC3-204ENST00000474190 PCGF6Q9BYE7 350 aa15.58■□□□□ 0.08
CASC3-204ENST00000474190 PPP6R1Q9UPN7 881 aa15.58■□□□□ 0.08
CASC3-204ENST00000474190 PZPP20742 1482 aa15.58■□□□□ 0.08
CASC3-204ENST00000474190 ABCC3O15438 1527 aa15.58■□□□□ 0.08
CASC3-204ENST00000474190 LMTK2Q8IWU2 1503 aa15.58■□□□□ 0.08
CASC3-204ENST00000474190 NUP155O75694 1391 aa15.55■□□□□ 0.08
CASC3-204ENST00000474190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.55■□□□□ 0.081e-7■■□□□ 13.4
CASC3-204ENST00000474190 FAM135AQ9P2D6 1515 aa15.53■□□□□ 0.08
CASC3-204ENST00000474190 ZMYM3Q14202 1370 aa15.53■□□□□ 0.08
CASC3-204ENST00000474190 ILDR2Q71H61 639 aa15.53■□□□□ 0.08
CASC3-204ENST00000474190 NPATQ14207 1427 aa15.52■□□□□ 0.08
CASC3-204ENST00000474190 WASHC2CQ9Y4E1 1318 aa15.52■□□□□ 0.08
CASC3-204ENST00000474190 ARHGAP31Q2M1Z3 1444 aa15.51■□□□□ 0.07
CASC3-204ENST00000474190 CEBPAP49715 358 aaPredicted RBP15.51■□□□□ 0.07
CASC3-204ENST00000474190 CNTLNQ9NXG0 1405 aa15.51■□□□□ 0.07
CASC3-204ENST00000474190 IQGAP3Q86VI3 1631 aa15.5■□□□□ 0.07
CASC3-204ENST00000474190 PLA2R1Q13018 1463 aa15.49■□□□□ 0.07
CASC3-204ENST00000474190 HSPA2P54652 639 aa15.49■□□□□ 0.07
CASC3-204ENST00000474190 FBXO31Q5XUX0 539 aaPredicted RBP15.49■□□□□ 0.07
CASC3-204ENST00000474190 DISP3Q9P2K9 1392 aa15.49■□□□□ 0.07
CASC3-204ENST00000474190 MPHOSPH9Q99550 1183 aa15.48■□□□□ 0.07
CASC3-204ENST00000474190 EFCAB6Q5THR3 1501 aa15.48■□□□□ 0.07
CASC3-204ENST00000474190 SOCS7O14512 581 aa15.47■□□□□ 0.07
CASC3-204ENST00000474190 KANK1Q14678 1352 aa15.47■□□□□ 0.07
CASC3-204ENST00000474190 NOS1P29475 1434 aa15.46■□□□□ 0.07
CASC3-204ENST00000474190 CERKQ8TCT0 537 aa15.46■□□□□ 0.07
CASC3-204ENST00000474190 TRIM52Q96A61 297 aa15.46■□□□□ 0.07
CASC3-204ENST00000474190 CLTCQ00610 1675 aaKnown RBP15.46■□□□□ 0.07
CASC3-204ENST00000474190 SPATA31D1Q6ZQQ2 1576 aa15.45■□□□□ 0.06
CASC3-204ENST00000474190 PTPRTO14522 1441 aa15.45■□□□□ 0.06
CASC3-204ENST00000474190 PKD2Q13563 968 aa15.45■□□□□ 0.06
CASC3-204ENST00000474190 FOXD1Q16676 465 aa15.45■□□□□ 0.06
CASC3-204ENST00000474190 CEP152O94986 1710 aa15.44■□□□□ 0.06
CASC3-204ENST00000474190 SLC4A1APQ9BWU0 796 aaKnown RBP15.44■□□□□ 0.06
CASC3-204ENST00000474190 DHX57Q6P158 1386 aaKnown RBP15.44■□□□□ 0.06
CASC3-204ENST00000474190 ZC3H13Q5T200 1668 aaKnown RBP15.44■□□□□ 0.06
CASC3-204ENST00000474190 FER1L4A9Z1Z3 1794 aa15.44■□□□□ 0.06
CASC3-204ENST00000474190 CAMSAP1Q5T5Y3 1602 aa15.43■□□□□ 0.06
CASC3-204ENST00000474190 ERVK-7P63135 1459 aa15.43■□□□□ 0.06
CASC3-204ENST00000474190 MROH2AA6NES4 1674 aa15.43■□□□□ 0.06
CASC3-204ENST00000474190 TET3O43151 1660 aa15.43■□□□□ 0.06
CASC3-204ENST00000474190 RPRD2Q5VT52 1461 aaKnown RBP15.42■□□□□ 0.06
CASC3-204ENST00000474190 C3P01024 1663 aa15.41■□□□□ 0.06
CASC3-204ENST00000474190 E9PCH4 1651 aa15.41■□□□□ 0.06
CASC3-204ENST00000474190 ACIN1Q9UKV3 1341 aaKnown RBP15.41■□□□□ 0.06
CASC3-204ENST00000474190 ANKRD30BQ9BXX2 1392 aa15.39■□□□□ 0.05
CASC3-204ENST00000474190 PLPPR3Q6T4P5 718 aa15.39■□□□□ 0.05
CASC3-204ENST00000474190 SYNMO15061 1565 aa15.39■□□□□ 0.05
CASC3-204ENST00000474190 ESF1Q9H501 851 aaKnown RBP15.38■□□□□ 0.05
CASC3-204ENST00000474190 TNRQ92752 1358 aa15.36■□□□□ 0.05
CASC3-204ENST00000474190 PREX1Q8TCU6 1659 aa15.36■□□□□ 0.05
CASC3-204ENST00000474190 UGGT1Q9NYU2 1555 aa15.36■□□□□ 0.05
CASC3-204ENST00000474190 IDI1Q13907 227 aa15.35■□□□□ 0.05
CASC3-204ENST00000474190 STRCQ7RTU9 1775 aa15.34■□□□□ 0.05
CASC3-204ENST00000474190 TRPM2O94759 1503 aa15.33■□□□□ 0.05
CASC3-204ENST00000474190 PIK3C2BO00750 1634 aa15.32■□□□□ 0.04
CASC3-204ENST00000474190 NLRP1Q9C000 1473 aa15.29■□□□□ 0.04
CASC3-204ENST00000474190 SLC52A1Q9NWF4 448 aa15.29■□□□□ 0.04
CASC3-204ENST00000474190 CLTCL1P53675 1640 aa15.28■□□□□ 0.04
CASC3-204ENST00000474190 SPATA31E1Q6ZUB1 1445 aa15.28■□□□□ 0.04
CASC3-204ENST00000474190 A2ML1A8K2U0 1454 aa15.27■□□□□ 0.04
CASC3-204ENST00000474190 MYO3AQ8NEV4 1616 aa15.27■□□□□ 0.03
CASC3-204ENST00000474190 SIN3AQ96ST3 1273 aa15.26■□□□□ 0.03
CASC3-204ENST00000474190 SPHKAPQ2M3C7 1700 aa15.26■□□□□ 0.03
CASC3-204ENST00000474190 UHRF1BP1Q6BDS2 1440 aa15.25■□□□□ 0.03
CASC3-204ENST00000474190 CEP170BQ9Y4F5 1589 aaPredicted RBP15.24■□□□□ 0.03
CASC3-204ENST00000474190 ADGRB3O60242 1522 aa15.24■□□□□ 0.03
CASC3-204ENST00000474190 ARHGAP23Q9P227 1491 aa15.23■□□□□ 0.03
CASC3-204ENST00000474190 TMEM131LA2VDJ0 1609 aa15.23■□□□□ 0.03
CASC3-204ENST00000474190 CCDC144AA2RUR9 1427 aa15.23■□□□□ 0.03
CASC3-204ENST00000474190 ZNF142P52746 1687 aaPredicted RBP15.22■□□□□ 0.03
CASC3-204ENST00000474190 CFAP65Q6ZU64 1925 aaKnown RBP15.22■□□□□ 0.03
CASC3-204ENST00000474190 ZFYVE9O95405 1425 aa15.22■□□□□ 0.03
CASC3-204ENST00000474190 SETD1BQ9UPS6 1966 aaKnown RBP15.22■□□□□ 0.03
CASC3-204ENST00000474190 LTBP4Q8N2S1 1624 aa15.21■□□□□ 0.02
CASC3-204ENST00000474190 LTKP29376 864 aa15.2■□□□□ 0.02
CASC3-204ENST00000474190 TMEM2Q9UHN6 1383 aa15.2■□□□□ 0.02
CASC3-204ENST00000474190 NEURL4Q96JN8 1562 aa15.19■□□□□ 0.02
CASC3-204ENST00000474190 SLIT1O75093 1534 aa15.19■□□□□ 0.02
CASC3-204ENST00000474190 UBR1Q8IWV7 1749 aa15.19■□□□□ 0.02
CASC3-204ENST00000474190 CLSPNQ9HAW4 1339 aa15.17■□□□□ 0.02
CASC3-204ENST00000474190 KDM5AP29375 1690 aaKnown RBP15.16■□□□□ 0.02
CASC3-204ENST00000474190 THEMISQ8N1K5 641 aaPredicted RBP15.16■□□□□ 0.02
CASC3-204ENST00000474190 IQSEC2Q5JU85 1478 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms