RNA–Protein interactions for RNA: ENST00000474100.1

PSMB4-203, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 755 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-203ENST00000474100 KIDINS220Q9ULH0 1771 aa11.78□□□□□ -0.52
PSMB4-203ENST00000474100 PREX2Q70Z35 1606 aa11.78□□□□□ -0.52
PSMB4-203ENST00000474100 MROH2AA6NES4 1674 aa11.78□□□□□ -0.52
PSMB4-203ENST00000474100 ITSN2Q9NZM3 1697 aa11.78□□□□□ -0.52
PSMB4-203ENST00000474100 CEP170BQ9Y4F5 1589 aaPredicted RBP11.77□□□□□ -0.53
PSMB4-203ENST00000474100 NPM3O75607 178 aaKnown RBP11.77□□□□□ -0.53
PSMB4-203ENST00000474100 HNRNPMP52272 730 aaKnown RBP eCLIP11.77□□□□□ -0.53
PSMB4-203ENST00000474100 PTPRKQ15262 1439 aa11.77□□□□□ -0.53
PSMB4-203ENST00000474100 MYO3AQ8NEV4 1616 aa11.76□□□□□ -0.53
PSMB4-203ENST00000474100 SAMD9LQ8IVG5 1584 aa11.75□□□□□ -0.53
PSMB4-203ENST00000474100 CLTCQ00610 1675 aaKnown RBP11.75□□□□□ -0.53
PSMB4-203ENST00000474100 SUPT6HQ7KZ85 1726 aaKnown RBP11.74□□□□□ -0.53
PSMB4-203ENST00000474100 ZNF142P52746 1687 aaPredicted RBP11.74□□□□□ -0.53
PSMB4-203ENST00000474100 A2MP01023 1474 aa11.73□□□□□ -0.53
PSMB4-203ENST00000474100 CCDC18Q5T9S5 1454 aa11.73□□□□□ -0.53
PSMB4-203ENST00000474100 AKT1S1Q96B36 256 aa11.73□□□□□ -0.53
PSMB4-203ENST00000474100 SYCP2Q9BX26 1530 aa11.73□□□□□ -0.53
PSMB4-203ENST00000474100 CPS1P31327 1500 aa11.72□□□□□ -0.53
PSMB4-203ENST00000474100 A2ML1A8K2U0 1454 aa11.72□□□□□ -0.53
PSMB4-203ENST00000474100 ATP7AQ04656 1500 aa11.71□□□□□ -0.53
PSMB4-203ENST00000474100 SHANK2Q9UPX8 1470 aa11.71□□□□□ -0.53
PSMB4-203ENST00000474100 CFDP1Q9UEE9 299 aaPredicted RBP11.71□□□□□ -0.53
PSMB4-203ENST00000474100 LRRIQ1Q96JM4 1722 aa11.7□□□□□ -0.54
PSMB4-203ENST00000474100 ANKLE2Q86XL3 938 aa11.7□□□□□ -0.54
PSMB4-203ENST00000474100 CASKIN1Q8WXD9 1431 aa11.69□□□□□ -0.54
PSMB4-203ENST00000474100 TNRQ92752 1358 aa11.69□□□□□ -0.54
PSMB4-203ENST00000474100 EVX2Q03828 476 aa11.69□□□□□ -0.54
PSMB4-203ENST00000474100 PLEKHH2Q8IVE3 1493 aa11.69□□□□□ -0.54
PSMB4-203ENST00000474100 CDC42BPAQ5VT25 1732 aa11.69□□□□□ -0.54
PSMB4-203ENST00000474100 PLXNC1O60486 1568 aa11.68□□□□□ -0.54
PSMB4-203ENST00000474100 FBXO31Q5XUX0 539 aaPredicted RBP11.68□□□□□ -0.54
PSMB4-203ENST00000474100 GPATCH8Q9UKJ3 1502 aaKnown RBP11.68□□□□□ -0.54
PSMB4-203ENST00000474100 KIAA1107Q9UPP5 1409 aa11.68□□□□□ -0.54
PSMB4-203ENST00000474100 DNMT1P26358 1616 aaKnown RBP11.68□□□□□ -0.54
PSMB4-203ENST00000474100 THEMISQ8N1K5 641 aaPredicted RBP11.67□□□□□ -0.54
PSMB4-203ENST00000474100 CCNB3Q8WWL7 1395 aa11.67□□□□□ -0.54
PSMB4-203ENST00000474100 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.67□□□□□ -0.54
PSMB4-203ENST00000474100 INO80Q9ULG1 1556 aaPredicted RBP11.66□□□□□ -0.54
PSMB4-203ENST00000474100 NEURL4Q96JN8 1562 aa11.65□□□□□ -0.54
PSMB4-203ENST00000474100 NPHP4O75161 1426 aaPredicted RBP11.64□□□□□ -0.55
PSMB4-203ENST00000474100 KIF3BO15066 747 aa11.64□□□□□ -0.55
PSMB4-203ENST00000474100 WASHC2CQ9Y4E1 1318 aa11.63□□□□□ -0.55
PSMB4-203ENST00000474100 FXR2P51116 673 aaKnown RBP eCLIP11.63□□□□□ -0.55
PSMB4-203ENST00000474100 POLR1AO95602 1720 aaPredicted RBP11.63□□□□□ -0.55
PSMB4-203ENST00000474100 FYCO1Q9BQS8 1478 aa11.63□□□□□ -0.55
PSMB4-203ENST00000474100 VWDEQ8N2E2 1590 aa11.62□□□□□ -0.55
PSMB4-203ENST00000474100 FAM135AQ9P2D6 1515 aa11.62□□□□□ -0.55
PSMB4-203ENST00000474100 DHX29Q7Z478 1369 aaKnown RBP11.62□□□□□ -0.55
PSMB4-203ENST00000474100 ZNF644Q9H582 1327 aaPredicted RBP11.61□□□□□ -0.55
PSMB4-203ENST00000474100 MTUS2Q5JR59 1369 aa11.61□□□□□ -0.55
PSMB4-203ENST00000474100 PZPP20742 1482 aa11.61□□□□□ -0.55
PSMB4-203ENST00000474100 MIA2Q96PC5 1412 aa11.6□□□□□ -0.55
PSMB4-203ENST00000474100 ADGBQ8N7X0 1667 aa11.6□□□□□ -0.55
PSMB4-203ENST00000474100 UGGT1Q9NYU2 1555 aa11.6□□□□□ -0.55
PSMB4-203ENST00000474100 RGS17Q9UGC6 210 aaPredicted RBP11.6□□□□□ -0.55
PSMB4-203ENST00000474100 ALKQ9UM73 1620 aa11.6□□□□□ -0.55
PSMB4-203ENST00000474100 KDM5DQ9BY66 1539 aa11.6□□□□□ -0.55
PSMB4-203ENST00000474100 NLRP1Q9C000 1473 aa11.59□□□□□ -0.55
PSMB4-203ENST00000474100 REM2Q8IYK8 340 aaPredicted RBP11.59□□□□□ -0.55
PSMB4-203ENST00000474100 MED14O60244 1454 aa11.58□□□□□ -0.56
PSMB4-203ENST00000474100 LRRC7Q96NW7 1537 aa11.58□□□□□ -0.56
PSMB4-203ENST00000474100 RTEL1-TNFRSF6BF6WH68 1400 aa11.58□□□□□ -0.56
PSMB4-203ENST00000474100 CEP162Q5TB80 1403 aa11.57□□□□□ -0.56
PSMB4-203ENST00000474100 RNF17Q9BXT8 1623 aaKnown RBP11.57□□□□□ -0.56
PSMB4-203ENST00000474100 DEPDC5O75140 1603 aa11.56□□□□□ -0.56
PSMB4-203ENST00000474100 MBD5Q9P267 1494 aa11.56□□□□□ -0.56
PSMB4-203ENST00000474100 POTEAQ6S8J7 498 aa11.55□□□□□ -0.56
PSMB4-203ENST00000474100 IQGAP1P46940 1657 aa11.55□□□□□ -0.56
PSMB4-203ENST00000474100 SAMD1Q6SPF0 538 aaPredicted RBP11.54□□□□□ -0.56
PSMB4-203ENST00000474100 SYNMO15061 1565 aa11.54□□□□□ -0.56
PSMB4-203ENST00000474100 SLC4A2P04920 1241 aa11.53□□□□□ -0.56
PSMB4-203ENST00000474100 CCDC141Q6ZP82 1450 aa11.52□□□□□ -0.56
PSMB4-203ENST00000474100 TIAM1Q13009 1591 aa11.52□□□□□ -0.57
PSMB4-203ENST00000474100 TSPY4P0CV99 314 aa11.51□□□□□ -0.57
PSMB4-203ENST00000474100 TSPY10P0CW01 314 aa11.51□□□□□ -0.57
PSMB4-203ENST00000474100 RSPH4AQ5TD94 716 aa11.51□□□□□ -0.57
PSMB4-203ENST00000474100 TXNDC2Q86VQ3 553 aa11.51□□□□□ -0.57
PSMB4-203ENST00000474100 STRCP1A6NGW2 1772 aa11.5□□□□□ -0.57
PSMB4-203ENST00000474100 POLA2Q14181 598 aa11.49□□□□□ -0.57
PSMB4-203ENST00000474100 EID1Q9Y6B2 187 aa11.49□□□□□ -0.57
PSMB4-203ENST00000474100 SCAF11Q99590 1463 aaKnown RBP11.49□□□□□ -0.57
PSMB4-203ENST00000474100 PITPNM1O00562 1244 aa11.48□□□□□ -0.57
PSMB4-203ENST00000474100 LTKP29376 864 aa11.48□□□□□ -0.57
PSMB4-203ENST00000474100 FAM135BQ49AJ0 1406 aa11.48□□□□□ -0.57
PSMB4-203ENST00000474100 EHBP1L1Q8N3D4 1523 aa11.48□□□□□ -0.57
PSMB4-203ENST00000474100 ERVK-7P63135 1459 aa11.47□□□□□ -0.57
PSMB4-203ENST00000474100 CAMSAP2Q08AD1 1489 aa11.47□□□□□ -0.57
PSMB4-203ENST00000474100 ABCC3O15438 1527 aa11.46□□□□□ -0.57
PSMB4-203ENST00000474100 STAG3Q9UJ98 1225 aa11.46□□□□□ -0.57
PSMB4-203ENST00000474100 TMEM94Q12767 1356 aa11.45□□□□□ -0.58
PSMB4-203ENST00000474100 ZC3H13Q5T200 1668 aaKnown RBP11.44□□□□□ -0.58
PSMB4-203ENST00000474100 PROSER2Q86WR7 435 aaPredicted RBP11.44□□□□□ -0.58
PSMB4-203ENST00000474100 RBM33Q96EV2 1170 aaKnown RBP11.44□□□□□ -0.58
PSMB4-203ENST00000474100 NCOA2Q15596 1464 aa11.43□□□□□ -0.58
PSMB4-203ENST00000474100 MEX3CQ5U5Q3 659 aaKnown RBP11.42□□□□□ -0.58
PSMB4-203ENST00000474100 VPS8Q8N3P4 1428 aa11.42□□□□□ -0.58
PSMB4-203ENST00000474100 SETD1AO15047 1707 aaKnown RBP11.41□□□□□ -0.58
PSMB4-203ENST00000474100 ARHGAP23Q9P227 1491 aa11.41□□□□□ -0.58
PSMB4-203ENST00000474100 KCNA6P17658 529 aa11.41□□□□□ -0.58
PSMB4-203ENST00000474100 TRIM52Q96A61 297 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms