RNA–Protein interactions for RNA: ENST00000473996.1

PLXNB1-213, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 1,034 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-213ENST00000473996 FAM135AQ9P2D6 1515 aa23.08■■□□□ 1.29
PLXNB1-213ENST00000473996 MYO3AQ8NEV4 1616 aa23.08■■□□□ 1.28
PLXNB1-213ENST00000473996 ZNF142P52746 1687 aaPredicted RBP23.07■■□□□ 1.28
PLXNB1-213ENST00000473996 MAST1Q9Y2H9 1570 aa23.07■■□□□ 1.28
PLXNB1-213ENST00000473996 CAMSAP1Q5T5Y3 1602 aa23.05■■□□□ 1.28
PLXNB1-213ENST00000473996 KDM5DQ9BY66 1539 aa23.05■■□□□ 1.28
PLXNB1-213ENST00000473996 TCOF1Q13428 1488 aaKnown RBP23.05■■□□□ 1.28
PLXNB1-213ENST00000473996 CEP170BQ9Y4F5 1589 aaPredicted RBP23.03■■□□□ 1.28
PLXNB1-213ENST00000473996 ABCC5O15440 1437 aa23.03■■□□□ 1.28
PLXNB1-213ENST00000473996 PTPN23Q9H3S7 1636 aa23.02■■□□□ 1.28
PLXNB1-213ENST00000473996 CHIC2Q9UKJ5 165 aa23.01■■□□□ 1.27
PLXNB1-213ENST00000473996 PZPP20742 1482 aa23■■□□□ 1.27
PLXNB1-213ENST00000473996 PLA2R1Q13018 1463 aa23■■□□□ 1.27
PLXNB1-213ENST00000473996 WASHC2CQ9Y4E1 1318 aa23■■□□□ 1.27
PLXNB1-213ENST00000473996 DAPK1P53355 1430 aa22.99■■□□□ 1.27
PLXNB1-213ENST00000473996 RNF17Q9BXT8 1623 aaKnown RBP22.98■■□□□ 1.27
PLXNB1-213ENST00000473996 RRP7BPQ9NSQ0 103 aa22.98■■□□□ 1.27
PLXNB1-213ENST00000473996 EIF2AK4Q9P2K8 1649 aaKnown RBP22.97■■□□□ 1.27
PLXNB1-213ENST00000473996 A2ML1A8K2U0 1454 aa22.97■■□□□ 1.27
PLXNB1-213ENST00000473996 PKD2Q13563 968 aa22.95■■□□□ 1.26
PLXNB1-213ENST00000473996 TNRQ92752 1358 aa22.95■■□□□ 1.26
PLXNB1-213ENST00000473996 FBXO31Q5XUX0 539 aaPredicted RBP22.94■■□□□ 1.26
PLXNB1-213ENST00000473996 CROCC2H7BZ55 1655 aa22.93■■□□□ 1.26
PLXNB1-213ENST00000473996 DNMT1P26358 1616 aaKnown RBP22.93■■□□□ 1.26
PLXNB1-213ENST00000473996 SHANK2Q9UPX8 1470 aa22.93■■□□□ 1.26
PLXNB1-213ENST00000473996 ANKRD30AQ9BXX3 1397 aa22.93■■□□□ 1.26
PLXNB1-213ENST00000473996 NCKAP5LQ9HCH0 1330 aa22.93■■□□□ 1.26
PLXNB1-213ENST00000473996 ITGAEP38570 1179 aa22.93■■□□□ 1.26
PLXNB1-213ENST00000473996 ZC3H13Q5T200 1668 aaKnown RBP22.93■■□□□ 1.26
PLXNB1-213ENST00000473996 DUOX2Q9NRD8 1548 aa22.92■■□□□ 1.26
PLXNB1-213ENST00000473996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.92■■□□□ 1.26
PLXNB1-213ENST00000473996 LTBP4Q8N2S1 1624 aa22.92■■□□□ 1.26
PLXNB1-213ENST00000473996 ABCC3O15438 1527 aa22.91■■□□□ 1.26
PLXNB1-213ENST00000473996 KIF15Q9NS87 1388 aa22.9■■□□□ 1.26
PLXNB1-213ENST00000473996 MROH1Q8NDA8 1641 aa22.89■■□□□ 1.25
PLXNB1-213ENST00000473996 NLRP1Q9C000 1473 aa22.87■■□□□ 1.25
PLXNB1-213ENST00000473996 ERBINQ96RT1 1412 aa22.85■■□□□ 1.25
PLXNB1-213ENST00000473996 RRBP1Q9P2E9 1410 aaKnown RBP22.85■■□□□ 1.25
PLXNB1-213ENST00000473996 IQSEC2Q5JU85 1478 aa22.85■■□□□ 1.25
PLXNB1-213ENST00000473996 CEP152O94986 1710 aa22.84■■□□□ 1.25
PLXNB1-213ENST00000473996 POLR1AO95602 1720 aaPredicted RBP22.83■■□□□ 1.25
PLXNB1-213ENST00000473996 SPATA31D1Q6ZQQ2 1576 aa22.83■■□□□ 1.25
PLXNB1-213ENST00000473996 PRDM15P57071 1507 aaPredicted RBP22.82■■□□□ 1.24
PLXNB1-213ENST00000473996 ZNF335Q9H4Z2 1342 aaPredicted RBP22.82■■□□□ 1.24
PLXNB1-213ENST00000473996 UGGT1Q9NYU2 1555 aa22.81■■□□□ 1.24
PLXNB1-213ENST00000473996 ERVK-7P63135 1459 aa22.81■■□□□ 1.24
PLXNB1-213ENST00000473996 THEMISQ8N1K5 641 aaPredicted RBP22.8■■□□□ 1.24
PLXNB1-213ENST00000473996 CFAP65Q6ZU64 1925 aaKnown RBP22.8■■□□□ 1.24
PLXNB1-213ENST00000473996 NEURL4Q96JN8 1562 aa22.79■■□□□ 1.24
PLXNB1-213ENST00000473996 ADGRL2O95490 1459 aa22.79■■□□□ 1.24
PLXNB1-213ENST00000473996 ROCK1Q13464 1354 aa22.78■■□□□ 1.24
PLXNB1-213ENST00000473996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.78■■□□□ 1.249e-8■□□□□ 9.9
PLXNB1-213ENST00000473996 DEPDC5O75140 1603 aa22.78■■□□□ 1.24
PLXNB1-213ENST00000473996 ANKLE2Q86XL3 938 aa22.76■■□□□ 1.23
PLXNB1-213ENST00000473996 ARHGAP31Q2M1Z3 1444 aa22.75■■□□□ 1.23
PLXNB1-213ENST00000473996 ANKRD50Q9ULJ7 1429 aa22.74■■□□□ 1.23
PLXNB1-213ENST00000473996 KANK1Q14678 1352 aa22.72■■□□□ 1.23
PLXNB1-213ENST00000473996 MED14O60244 1454 aa22.72■■□□□ 1.23
PLXNB1-213ENST00000473996 NPHP4O75161 1426 aaPredicted RBP22.69■■□□□ 1.22
PLXNB1-213ENST00000473996 UBR1Q8IWV7 1749 aa22.68■■□□□ 1.22
PLXNB1-213ENST00000473996 VWDEQ8N2E2 1590 aa22.67■■□□□ 1.22
PLXNB1-213ENST00000473996 LMTK2Q8IWU2 1503 aa22.67■■□□□ 1.22
PLXNB1-213ENST00000473996 IQGAP1P46940 1657 aa22.66■■□□□ 1.22
PLXNB1-213ENST00000473996 CPS1P31327 1500 aa22.66■■□□□ 1.22
PLXNB1-213ENST00000473996 UBAP1LF5GYI3 381 aa22.62■■□□□ 1.21
PLXNB1-213ENST00000473996 SLIT1O75093 1534 aa22.61■■□□□ 1.21
PLXNB1-213ENST00000473996 EFCAB6Q5THR3 1501 aa22.61■■□□□ 1.21
PLXNB1-213ENST00000473996 SCAF11Q99590 1463 aaKnown RBP22.6■■□□□ 1.21
PLXNB1-213ENST00000473996 ARHGAP23Q9P227 1491 aa22.6■■□□□ 1.21
PLXNB1-213ENST00000473996 PIK3C2BO00750 1634 aa22.59■■□□□ 1.21
PLXNB1-213ENST00000473996 NUP155O75694 1391 aa22.57■■□□□ 1.2
PLXNB1-213ENST00000473996 KDM5AP29375 1690 aaKnown RBP22.57■■□□□ 1.2
PLXNB1-213ENST00000473996 NOS1P29475 1434 aa22.57■■□□□ 1.2
PLXNB1-213ENST00000473996 NAIPQ13075 1403 aa22.56■■□□□ 1.2
PLXNB1-213ENST00000473996 SYNMO15061 1565 aa22.55■■□□□ 1.2
PLXNB1-213ENST00000473996 LTKP29376 864 aa22.54■■□□□ 1.2
PLXNB1-213ENST00000473996 TXNDC2Q86VQ3 553 aa22.54■■□□□ 1.2
PLXNB1-213ENST00000473996 STAG3Q9UJ98 1225 aa22.54■■□□□ 1.2
PLXNB1-213ENST00000473996 RPRD2Q5VT52 1461 aaKnown RBP22.54■■□□□ 1.2
PLXNB1-213ENST00000473996 IDI1Q13907 227 aa22.53■■□□□ 1.2
PLXNB1-213ENST00000473996 TRIM52Q96A61 297 aa22.53■■□□□ 1.2
PLXNB1-213ENST00000473996 EID1Q9Y6B2 187 aa22.53■■□□□ 1.2
PLXNB1-213ENST00000473996 HFM1A2PYH4 1435 aa22.53■■□□□ 1.2
PLXNB1-213ENST00000473996 STRCP1A6NGW2 1772 aa22.53■■□□□ 1.2
PLXNB1-213ENST00000473996 TMEM2Q9UHN6 1383 aa22.52■■□□□ 1.2
PLXNB1-213ENST00000473996 TET3O43151 1660 aa22.52■■□□□ 1.2
PLXNB1-213ENST00000473996 TOM1O60784 492 aa22.51■■□□□ 1.19
PLXNB1-213ENST00000473996 UNC13BO14795 1591 aa22.5■■□□□ 1.19
PLXNB1-213ENST00000473996 SLC52A1Q9NWF4 448 aa22.5■■□□□ 1.19
PLXNB1-213ENST00000473996 GCC2Q8IWJ2 1684 aa22.49■■□□□ 1.19
PLXNB1-213ENST00000473996 DISP3Q9P2K9 1392 aa22.48■■□□□ 1.19
PLXNB1-213ENST00000473996 ADGRB3O60242 1522 aa22.47■■□□□ 1.19
PLXNB1-213ENST00000473996 LRRC7Q96NW7 1537 aa22.47■■□□□ 1.19
PLXNB1-213ENST00000473996 PIP4K2BP78356 416 aa22.44■■□□□ 1.18
PLXNB1-213ENST00000473996 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
PLXNB1-213ENST00000473996 ACIN1Q9UKV3 1341 aaKnown RBP22.44■■□□□ 1.18
PLXNB1-213ENST00000473996 IQGAP3Q86VI3 1631 aa22.42■■□□□ 1.18
PLXNB1-213ENST00000473996 SETD5Q9C0A6 1442 aa22.41■■□□□ 1.18
PLXNB1-213ENST00000473996 ALKQ9UM73 1620 aa22.41■■□□□ 1.18
PLXNB1-213ENST00000473996 E9PCH4 1651 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms