RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 WASHC2CQ9Y4E1 1318 aa20.87■□□□□ 0.93
USF1-205ENST00000473969 ERBINQ96RT1 1412 aa20.86■□□□□ 0.93
USF1-205ENST00000473969 ADGRL2O95490 1459 aa20.85■□□□□ 0.93
USF1-205ENST00000473969 ZMYM3Q14202 1370 aa20.84■□□□□ 0.93
USF1-205ENST00000473969 ROCK1Q13464 1354 aa20.82■□□□□ 0.92
USF1-205ENST00000473969 EIF2AK4Q9P2K8 1649 aaKnown RBP20.82■□□□□ 0.92
USF1-205ENST00000473969 PTPRKQ15262 1439 aa20.81■□□□□ 0.92
USF1-205ENST00000473969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.81■□□□□ 0.92
USF1-205ENST00000473969 KANK1Q14678 1352 aa20.8■□□□□ 0.92
USF1-205ENST00000473969 ANKRD50Q9ULJ7 1429 aa20.78■□□□□ 0.92
USF1-205ENST00000473969 CLTCQ00610 1675 aaKnown RBP20.78■□□□□ 0.92
USF1-205ENST00000473969 KDM5DQ9BY66 1539 aa20.78■□□□□ 0.92
USF1-205ENST00000473969 FAM135AQ9P2D6 1515 aa20.78■□□□□ 0.92
USF1-205ENST00000473969 MROH2AA6NES4 1674 aa20.77■□□□□ 0.91
USF1-205ENST00000473969 RNF17Q9BXT8 1623 aaKnown RBP20.75■□□□□ 0.91
USF1-205ENST00000473969 C3P01024 1663 aa20.74■□□□□ 0.91
USF1-205ENST00000473969 NPATQ14207 1427 aa20.72■□□□□ 0.91
USF1-205ENST00000473969 UHRF1BP1Q6BDS2 1440 aa20.72■□□□□ 0.91
USF1-205ENST00000473969 ABCC3O15438 1527 aa20.69■□□□□ 0.9
USF1-205ENST00000473969 ZC3H13Q5T200 1668 aaKnown RBP20.68■□□□□ 0.9
USF1-205ENST00000473969 SETD1BQ9UPS6 1966 aaKnown RBP20.68■□□□□ 0.9
USF1-205ENST00000473969 PRDM15P57071 1507 aaPredicted RBP20.68■□□□□ 0.9
USF1-205ENST00000473969 FBXO31Q5XUX0 539 aaPredicted RBP20.67■□□□□ 0.9
USF1-205ENST00000473969 PZPP20742 1482 aa20.67■□□□□ 0.9
USF1-205ENST00000473969 LMTK3Q96Q04 1460 aa20.67■□□□□ 0.9
USF1-205ENST00000473969 MROH1Q8NDA8 1641 aa20.67■□□□□ 0.9
USF1-205ENST00000473969 PREX1Q8TCU6 1659 aa20.65■□□□□ 0.9
USF1-205ENST00000473969 HSPA2P54652 639 aa20.65■□□□□ 0.9
USF1-205ENST00000473969 DEPDC5O75140 1603 aa20.64■□□□□ 0.9
USF1-205ENST00000473969 TNRQ92752 1358 aa20.64■□□□□ 0.89
USF1-205ENST00000473969 CEP152O94986 1710 aa20.61■□□□□ 0.89
USF1-205ENST00000473969 NUP155O75694 1391 aa20.61■□□□□ 0.89
USF1-205ENST00000473969 NAIPQ13075 1403 aa20.61■□□□□ 0.89
USF1-205ENST00000473969 HFM1A2PYH4 1435 aa20.6■□□□□ 0.89
USF1-205ENST00000473969 ARHGAP31Q2M1Z3 1444 aa20.6■□□□□ 0.89
USF1-205ENST00000473969 CAMSAP1Q5T5Y3 1602 aa20.6■□□□□ 0.89
USF1-205ENST00000473969 LMTK2Q8IWU2 1503 aa20.59■□□□□ 0.89
USF1-205ENST00000473969 TRIM52Q96A61 297 aa20.58■□□□□ 0.89
USF1-205ENST00000473969 VWDEQ8N2E2 1590 aa20.58■□□□□ 0.88
USF1-205ENST00000473969 UNC13BO14795 1591 aa20.56■□□□□ 0.88
USF1-205ENST00000473969 ERVK-7P63135 1459 aa20.56■□□□□ 0.88
USF1-205ENST00000473969 NLRP1Q9C000 1473 aa20.54■□□□□ 0.88
USF1-205ENST00000473969 MYO3AQ8NEV4 1616 aa20.53■□□□□ 0.88
USF1-205ENST00000473969 THEMISQ8N1K5 641 aaPredicted RBP20.53■□□□□ 0.88
USF1-205ENST00000473969 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
USF1-205ENST00000473969 A2ML1A8K2U0 1454 aa20.53■□□□□ 0.88
USF1-205ENST00000473969 SPATA31D1Q6ZQQ2 1576 aa20.53■□□□□ 0.88
USF1-205ENST00000473969 GCC2Q8IWJ2 1684 aa20.53■□□□□ 0.88
USF1-205ENST00000473969 STAG3Q9UJ98 1225 aa20.52■□□□□ 0.88
USF1-205ENST00000473969 EFCAB6Q5THR3 1501 aa20.52■□□□□ 0.87
USF1-205ENST00000473969 ACIN1Q9UKV3 1341 aaKnown RBP20.52■□□□□ 0.87
USF1-205ENST00000473969 CEP170BQ9Y4F5 1589 aaPredicted RBP20.51■□□□□ 0.87
USF1-205ENST00000473969 RPRD2Q5VT52 1461 aaKnown RBP20.5■□□□□ 0.87
USF1-205ENST00000473969 CFAP65Q6ZU64 1925 aaKnown RBP20.49■□□□□ 0.87
USF1-205ENST00000473969 TET3O43151 1660 aa20.49■□□□□ 0.87
USF1-205ENST00000473969 IQGAP3Q86VI3 1631 aa20.49■□□□□ 0.87
USF1-205ENST00000473969 ZNF142P52746 1687 aaPredicted RBP20.48■□□□□ 0.87
USF1-205ENST00000473969 SETD5Q9C0A6 1442 aa20.47■□□□□ 0.87
USF1-205ENST00000473969 SLC52A1Q9NWF4 448 aa20.47■□□□□ 0.87
USF1-205ENST00000473969 UGGT1Q9NYU2 1555 aa20.46■□□□□ 0.87
USF1-205ENST00000473969 PKD2Q13563 968 aa20.46■□□□□ 0.87
USF1-205ENST00000473969 SLC4A1APQ9BWU0 796 aaKnown RBP20.46■□□□□ 0.87
USF1-205ENST00000473969 NOS1P29475 1434 aa20.44■□□□□ 0.86
USF1-205ENST00000473969 IDI1Q13907 227 aa20.44■□□□□ 0.86
USF1-205ENST00000473969 ANKLE2Q86XL3 938 aa20.44■□□□□ 0.86
USF1-205ENST00000473969 NCKAP5LQ9HCH0 1330 aa20.44■□□□□ 0.86
USF1-205ENST00000473969 PLA2R1Q13018 1463 aa20.43■□□□□ 0.86
USF1-205ENST00000473969 FBXO41Q8TF61 875 aa20.41■□□□□ 0.86
USF1-205ENST00000473969 CHGAP10645 457 aaKnown RBP20.4■□□□□ 0.86
USF1-205ENST00000473969 EID1Q9Y6B2 187 aa20.39■□□□□ 0.85
USF1-205ENST00000473969 E9PCH4 1651 aa20.38■□□□□ 0.85
USF1-205ENST00000473969 SYNMO15061 1565 aa20.38■□□□□ 0.85
USF1-205ENST00000473969 PTPRTO14522 1441 aa20.37■□□□□ 0.85
USF1-205ENST00000473969 RAB3GAP2Q9H2M9 1393 aa20.37■□□□□ 0.85
USF1-205ENST00000473969 MPHOSPH9Q99550 1183 aa20.36■□□□□ 0.85
USF1-205ENST00000473969 HDGFP51858 240 aaKnown RBP20.35■□□□□ 0.85
USF1-205ENST00000473969 TXNDC2Q86VQ3 553 aa20.35■□□□□ 0.85
USF1-205ENST00000473969 STRCQ7RTU9 1775 aa20.35■□□□□ 0.85
USF1-205ENST00000473969 PIK3C2BO00750 1634 aa20.34■□□□□ 0.85
USF1-205ENST00000473969 HRCP23327 699 aa20.33■□□□□ 0.85
USF1-205ENST00000473969 UBR1Q8IWV7 1749 aa20.32■□□□□ 0.84
USF1-205ENST00000473969 TMEM2Q9UHN6 1383 aa20.32■□□□□ 0.84
USF1-205ENST00000473969 TRIM26Q12899 539 aaPredicted RBP20.3■□□□□ 0.84
USF1-205ENST00000473969 ADGRB3O60242 1522 aa20.3■□□□□ 0.84
USF1-205ENST00000473969 PPP1R15AO75807 674 aaPredicted RBP20.29■□□□□ 0.84
USF1-205ENST00000473969 NPHP4O75161 1426 aaPredicted RBP20.28■□□□□ 0.84
USF1-205ENST00000473969 FOXD1Q16676 465 aa20.28■□□□□ 0.84
USF1-205ENST00000473969 ZNF326Q5BKZ1 582 aaKnown RBP20.28■□□□□ 0.84
USF1-205ENST00000473969 BCANQ96GW7 911 aa20.28■□□□□ 0.84
USF1-205ENST00000473969 KDM5AP29375 1690 aaKnown RBP20.28■□□□□ 0.84
USF1-205ENST00000473969 SLIT1O75093 1534 aa20.27■□□□□ 0.84
USF1-205ENST00000473969 SPHKAPQ2M3C7 1700 aa20.27■□□□□ 0.84
USF1-205ENST00000473969 SCAF11Q99590 1463 aaKnown RBP20.27■□□□□ 0.84
USF1-205ENST00000473969 LTKP29376 864 aa20.27■□□□□ 0.84
USF1-205ENST00000473969 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.27■□□□□ 0.84
USF1-205ENST00000473969 ARHGAP23Q9P227 1491 aa20.26■□□□□ 0.83
USF1-205ENST00000473969 POLR1AO95602 1720 aaPredicted RBP20.26■□□□□ 0.83
USF1-205ENST00000473969 TRPM2O94759 1503 aa20.25■□□□□ 0.83
USF1-205ENST00000473969 MED14O60244 1454 aa20.24■□□□□ 0.83
USF1-205ENST00000473969 RIMS2Q9UQ26 1411 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms