RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 CEP152O94986 1710 aa18.77■□□□□ 0.59
TRAPPC12-217ENST00000473348 PRDM15P57071 1507 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC12-217ENST00000473348 IQGAP3Q86VI3 1631 aa18.74■□□□□ 0.59
TRAPPC12-217ENST00000473348 ZC3H13Q5T200 1668 aaKnown RBP18.73■□□□□ 0.59
TRAPPC12-217ENST00000473348 KDM5DQ9BY66 1539 aa18.72■□□□□ 0.59
TRAPPC12-217ENST00000473348 FER1L4A9Z1Z3 1794 aa18.71■□□□□ 0.59
TRAPPC12-217ENST00000473348 KIF3BO15066 747 aa18.7■□□□□ 0.58
TRAPPC12-217ENST00000473348 VWDEQ8N2E2 1590 aa18.69■□□□□ 0.58
TRAPPC12-217ENST00000473348 CLTCQ00610 1675 aaKnown RBP18.69■□□□□ 0.58
TRAPPC12-217ENST00000473348 TET3O43151 1660 aa18.68■□□□□ 0.58
TRAPPC12-217ENST00000473348 CAMSAP1Q5T5Y3 1602 aa18.67■□□□□ 0.58
TRAPPC12-217ENST00000473348 FAM135AQ9P2D6 1515 aa18.67■□□□□ 0.58
TRAPPC12-217ENST00000473348 HRCP23327 699 aa18.66■□□□□ 0.58
TRAPPC12-217ENST00000473348 ACIN1Q9UKV3 1341 aaKnown RBP18.65■□□□□ 0.58
TRAPPC12-217ENST00000473348 PZPP20742 1482 aa18.65■□□□□ 0.58
TRAPPC12-217ENST00000473348 ABCC3O15438 1527 aa18.64■□□□□ 0.58
TRAPPC12-217ENST00000473348 ARID4BQ4LE39 1312 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC12-217ENST00000473348 MROH2AA6NES4 1674 aa18.63■□□□□ 0.57
TRAPPC12-217ENST00000473348 E9PCH4 1651 aa18.63■□□□□ 0.57
TRAPPC12-217ENST00000473348 CFAP65Q6ZU64 1925 aaKnown RBP18.63■□□□□ 0.57
TRAPPC12-217ENST00000473348 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
TRAPPC12-217ENST00000473348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.63■□□□□ 0.571e-7■□□□□ 8.7
TRAPPC12-217ENST00000473348 NUP155O75694 1391 aa18.63■□□□□ 0.57
TRAPPC12-217ENST00000473348 KANK1Q14678 1352 aa18.63■□□□□ 0.57
TRAPPC12-217ENST00000473348 ADAMTSL3P82987 1691 aa18.63■□□□□ 0.57
TRAPPC12-217ENST00000473348 GGT6Q6P531 493 aa18.62■□□□□ 0.57
TRAPPC12-217ENST00000473348 MADDQ8WXG6 1647 aa18.62■□□□□ 0.57
TRAPPC12-217ENST00000473348 RIMS1Q86UR5 1692 aaKnown RBP18.61■□□□□ 0.57
TRAPPC12-217ENST00000473348 EFCAB6Q5THR3 1501 aa18.61■□□□□ 0.57
TRAPPC12-217ENST00000473348 LMTK2Q8IWU2 1503 aa18.61■□□□□ 0.57
TRAPPC12-217ENST00000473348 MLECQ14165 292 aa18.59■□□□□ 0.57
TRAPPC12-217ENST00000473348 SPHKAPQ2M3C7 1700 aa18.58■□□□□ 0.57
TRAPPC12-217ENST00000473348 C3P01024 1663 aa18.57■□□□□ 0.56
TRAPPC12-217ENST00000473348 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
TRAPPC12-217ENST00000473348 PREX1Q8TCU6 1659 aa18.55■□□□□ 0.56
TRAPPC12-217ENST00000473348 WASHC2CQ9Y4E1 1318 aa18.53■□□□□ 0.56
TRAPPC12-217ENST00000473348 MPHOSPH9Q99550 1183 aa18.53■□□□□ 0.56
TRAPPC12-217ENST00000473348 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
TRAPPC12-217ENST00000473348 CNTLNQ9NXG0 1405 aa18.53■□□□□ 0.56
TRAPPC12-217ENST00000473348 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
TRAPPC12-217ENST00000473348 ESF1Q9H501 851 aaKnown RBP18.5■□□□□ 0.55
TRAPPC12-217ENST00000473348 RPRD2Q5VT52 1461 aaKnown RBP18.5■□□□□ 0.55
TRAPPC12-217ENST00000473348 NPATQ14207 1427 aa18.49■□□□□ 0.55
TRAPPC12-217ENST00000473348 ARHGAP31Q2M1Z3 1444 aa18.49■□□□□ 0.55
TRAPPC12-217ENST00000473348 PKD2Q13563 968 aa18.47■□□□□ 0.55
TRAPPC12-217ENST00000473348 TRPM2O94759 1503 aa18.45■□□□□ 0.54
TRAPPC12-217ENST00000473348 SYNMO15061 1565 aa18.45■□□□□ 0.54
TRAPPC12-217ENST00000473348 KIF1BO60333 1816 aa18.44■□□□□ 0.54
TRAPPC12-217ENST00000473348 SPATA31D1Q6ZQQ2 1576 aa18.44■□□□□ 0.54
TRAPPC12-217ENST00000473348 FOXD1Q16676 465 aa18.44■□□□□ 0.54
TRAPPC12-217ENST00000473348 CLTCL1P53675 1640 aa18.44■□□□□ 0.54
TRAPPC12-217ENST00000473348 PIK3C2BO00750 1634 aa18.43■□□□□ 0.54
TRAPPC12-217ENST00000473348 CCER1Q8TC90 406 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC12-217ENST00000473348 ERVK-7P63135 1459 aa18.43■□□□□ 0.54
TRAPPC12-217ENST00000473348 ZMYM3Q14202 1370 aa18.42■□□□□ 0.54
TRAPPC12-217ENST00000473348 MYO5BQ9ULV0 1848 aa18.41■□□□□ 0.54
TRAPPC12-217ENST00000473348 PTPRTO14522 1441 aa18.4■□□□□ 0.54
TRAPPC12-217ENST00000473348 UGGT1Q9NYU2 1555 aa18.4■□□□□ 0.54
TRAPPC12-217ENST00000473348 NOS1P29475 1434 aa18.4■□□□□ 0.54
TRAPPC12-217ENST00000473348 PTPRMP28827 1452 aa18.39■□□□□ 0.54
TRAPPC12-217ENST00000473348 PLA2R1Q13018 1463 aa18.39■□□□□ 0.54
TRAPPC12-217ENST00000473348 ANKRD30BQ9BXX2 1392 aa18.39■□□□□ 0.53
TRAPPC12-217ENST00000473348 MYO3AQ8NEV4 1616 aa18.38■□□□□ 0.53
TRAPPC12-217ENST00000473348 SETD1BQ9UPS6 1966 aaKnown RBP18.37■□□□□ 0.53
TRAPPC12-217ENST00000473348 CLSPNQ9HAW4 1339 aa18.35■□□□□ 0.53
TRAPPC12-217ENST00000473348 CCDC144AA2RUR9 1427 aa18.34■□□□□ 0.53
TRAPPC12-217ENST00000473348 CEBPAP49715 358 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC12-217ENST00000473348 FBXO31Q5XUX0 539 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC12-217ENST00000473348 KDM5AP29375 1690 aaKnown RBP18.34■□□□□ 0.53
TRAPPC12-217ENST00000473348 ZNF142P52746 1687 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC12-217ENST00000473348 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
TRAPPC12-217ENST00000473348 UBR1Q8IWV7 1749 aa18.32■□□□□ 0.52
TRAPPC12-217ENST00000473348 TNRQ92752 1358 aa18.32■□□□□ 0.52
TRAPPC12-217ENST00000473348 KDM4FA0A1W2PPD8 638 aa18.32■□□□□ 0.52
TRAPPC12-217ENST00000473348 TMEM131LA2VDJ0 1609 aa18.31■□□□□ 0.52
TRAPPC12-217ENST00000473348 ADGRB3O60242 1522 aa18.3■□□□□ 0.52
TRAPPC12-217ENST00000473348 IFT172Q9UG01 1749 aa18.3■□□□□ 0.52
TRAPPC12-217ENST00000473348 NEURL4Q96JN8 1562 aa18.29■□□□□ 0.52
TRAPPC12-217ENST00000473348 NLRP1Q9C000 1473 aa18.28■□□□□ 0.52
TRAPPC12-217ENST00000473348 SIN3AQ96ST3 1273 aa18.28■□□□□ 0.52
TRAPPC12-217ENST00000473348 CEP170BQ9Y4F5 1589 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC12-217ENST00000473348 PPLO60437 1756 aa18.27■□□□□ 0.52
TRAPPC12-217ENST00000473348 NEUROD1Q13562 356 aa18.25■□□□□ 0.51
TRAPPC12-217ENST00000473348 SLC52A1Q9NWF4 448 aa18.25■□□□□ 0.51
TRAPPC12-217ENST00000473348 SPATA31E1Q6ZUB1 1445 aa18.23■□□□□ 0.51
TRAPPC12-217ENST00000473348 A2ML1A8K2U0 1454 aa18.23■□□□□ 0.51
TRAPPC12-217ENST00000473348 IDI1Q13907 227 aa18.22■□□□□ 0.51
TRAPPC12-217ENST00000473348 TONSLQ96HA7 1378 aa18.19■□□□□ 0.5
TRAPPC12-217ENST00000473348 NEXMIFQ5QGS0 1516 aa18.19■□□□□ 0.5
TRAPPC12-217ENST00000473348 CHGAP10645 457 aaKnown RBP18.19■□□□□ 0.5
TRAPPC12-217ENST00000473348 UHRF1BP1Q6BDS2 1440 aa18.19■□□□□ 0.5
TRAPPC12-217ENST00000473348 POLR1AO95602 1720 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC12-217ENST00000473348 STAG3Q9UJ98 1225 aa18.15■□□□□ 0.5
TRAPPC12-217ENST00000473348 RGL3Q3MIN7 710 aa18.14■□□□□ 0.49
TRAPPC12-217ENST00000473348 ZNF326Q5BKZ1 582 aaKnown RBP18.13■□□□□ 0.49
TRAPPC12-217ENST00000473348 SLIT1O75093 1534 aa18.13■□□□□ 0.49
TRAPPC12-217ENST00000473348 MYOM2P54296 1465 aa18.12■□□□□ 0.49
TRAPPC12-217ENST00000473348 L3MBTL2Q969R5 705 aa18.11■□□□□ 0.49
TRAPPC12-217ENST00000473348 LMTK3Q96Q04 1460 aa18.11■□□□□ 0.49
TRAPPC12-217ENST00000473348 ARHGAP23Q9P227 1491 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms