RNA–Protein interactions for RNA: ENST00000473259.1

UBFD1P1-201, Transcript of ubiquitin family domain containing 1 pseudogene 1, humanhuman

BASIC

Gene UBFD1P1, Length 814 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1P1-201ENST00000473259 CASKIN1Q8WXD9 1431 aa9.69□□□□□ -0.86
UBFD1P1-201ENST00000473259 FARP1Q9Y4F1 1045 aaPredicted RBP9.69□□□□□ -0.86
UBFD1P1-201ENST00000473259 SUPT6HQ7KZ85 1726 aaKnown RBP9.68□□□□□ -0.86
UBFD1P1-201ENST00000473259 SYCP2Q9BX26 1530 aa9.67□□□□□ -0.86
UBFD1P1-201ENST00000473259 ZNF518AQ6AHZ1 1483 aa9.67□□□□□ -0.86
UBFD1P1-201ENST00000473259 FBXO41Q8TF61 875 aa9.67□□□□□ -0.86
UBFD1P1-201ENST00000473259 MYT1LQ9UL68 1186 aa9.65□□□□□ -0.86
UBFD1P1-201ENST00000473259 GPATCH8Q9UKJ3 1502 aaKnown RBP9.65□□□□□ -0.86
UBFD1P1-201ENST00000473259 CLIP1P30622 1438 aa9.65□□□□□ -0.87
UBFD1P1-201ENST00000473259 PLEKHG5O94827 1062 aa9.64□□□□□ -0.87
UBFD1P1-201ENST00000473259 HNRNPMP52272 730 aaKnown RBP eCLIP9.64□□□□□ -0.87
UBFD1P1-201ENST00000473259 MIER1Q8N108 512 aa9.64□□□□□ -0.87
UBFD1P1-201ENST00000473259 FBXO3Q9UK99 471 aa9.64□□□□□ -0.87
UBFD1P1-201ENST00000473259 ZNF777Q9ULD5 760 aaPredicted RBP9.64□□□□□ -0.87
UBFD1P1-201ENST00000473259 FYCO1Q9BQS8 1478 aa9.64□□□□□ -0.87
UBFD1P1-201ENST00000473259 MLH3Q9UHC1 1453 aa9.64□□□□□ -0.87
UBFD1P1-201ENST00000473259 REREQ9P2R6 1566 aa9.63□□□□□ -0.87
UBFD1P1-201ENST00000473259 ZNF644Q9H582 1327 aaPredicted RBP9.63□□□□□ -0.87
UBFD1P1-201ENST00000473259 CCDC18Q5T9S5 1454 aa9.63□□□□□ -0.87
UBFD1P1-201ENST00000473259 CLTCQ00610 1675 aaKnown RBP9.63□□□□□ -0.87
UBFD1P1-201ENST00000473259 TIAM1Q13009 1591 aa9.63□□□□□ -0.87
UBFD1P1-201ENST00000473259 INO80Q9ULG1 1556 aaPredicted RBP9.62□□□□□ -0.87
UBFD1P1-201ENST00000473259 C19orf67A6NJJ6 358 aa9.61□□□□□ -0.87
UBFD1P1-201ENST00000473259 CDK11AQ9UQ88 783 aaPredicted RBP9.61□□□□□ -0.87
UBFD1P1-201ENST00000473259 CERKQ8TCT0 537 aa9.6□□□□□ -0.87
UBFD1P1-201ENST00000473259 AGLP35573 1532 aa9.6□□□□□ -0.87
UBFD1P1-201ENST00000473259 ADGBQ8N7X0 1667 aa9.59□□□□□ -0.87
UBFD1P1-201ENST00000473259 ATP7AQ04656 1500 aa9.59□□□□□ -0.87
UBFD1P1-201ENST00000473259 PLXNC1O60486 1568 aa9.58□□□□□ -0.88
UBFD1P1-201ENST00000473259 SETD1BQ9UPS6 1966 aaKnown RBP9.58□□□□□ -0.88
UBFD1P1-201ENST00000473259 PLCD3Q8N3E9 789 aa9.58□□□□□ -0.88
UBFD1P1-201ENST00000473259 SP7Q8TDD2 431 aaPredicted RBP9.58□□□□□ -0.88
UBFD1P1-201ENST00000473259 UHRF1BP1Q6BDS2 1440 aa9.57□□□□□ -0.88
UBFD1P1-201ENST00000473259 EVX2Q03828 476 aa9.57□□□□□ -0.88
UBFD1P1-201ENST00000473259 LTBP4Q8N2S1 1624 aa9.56□□□□□ -0.88
UBFD1P1-201ENST00000473259 MYO3AQ8NEV4 1616 aa9.56□□□□□ -0.88
UBFD1P1-201ENST00000473259 MROH2AA6NES4 1674 aa9.56□□□□□ -0.88
UBFD1P1-201ENST00000473259 LOC105371045A0A1W2PR82 267 aa9.56□□□□□ -0.88
UBFD1P1-201ENST00000473259 CAMSAP1Q5T5Y3 1602 aa9.56□□□□□ -0.88
UBFD1P1-201ENST00000473259 CEP162Q5TB80 1403 aa9.56□□□□□ -0.88
UBFD1P1-201ENST00000473259 MBD5Q9P267 1494 aa9.55□□□□□ -0.88
UBFD1P1-201ENST00000473259 CD44P16070 742 aaKnown RBP9.55□□□□□ -0.88
UBFD1P1-201ENST00000473259 MNX1P50219 401 aaPredicted RBP9.55□□□□□ -0.88
UBFD1P1-201ENST00000473259 SPAG9O60271 1321 aaKnown RBP9.55□□□□□ -0.88
UBFD1P1-201ENST00000473259 NCKAP5LQ9HCH0 1330 aa9.55□□□□□ -0.88
UBFD1P1-201ENST00000473259 A2MP01023 1474 aa9.54□□□□□ -0.88
UBFD1P1-201ENST00000473259 CCNB3Q8WWL7 1395 aa9.54□□□□□ -0.88
UBFD1P1-201ENST00000473259 NCOA1Q15788 1441 aa9.54□□□□□ -0.88
UBFD1P1-201ENST00000473259 EHBP1L1Q8N3D4 1523 aa9.53□□□□□ -0.88
UBFD1P1-201ENST00000473259 CFDP1Q9UEE9 299 aaPredicted RBP9.53□□□□□ -0.88
UBFD1P1-201ENST00000473259 ZMYM3Q14202 1370 aa9.52□□□□□ -0.88
UBFD1P1-201ENST00000473259 MTUS2Q5JR59 1369 aa9.52□□□□□ -0.88
UBFD1P1-201ENST00000473259 ZNF142P52746 1687 aaPredicted RBP9.52□□□□□ -0.89
UBFD1P1-201ENST00000473259 PTPRKQ15262 1439 aa9.52□□□□□ -0.89
UBFD1P1-201ENST00000473259 GGT6Q6P531 493 aa9.52□□□□□ -0.89
UBFD1P1-201ENST00000473259 ILDR2Q71H61 639 aa9.52□□□□□ -0.89
UBFD1P1-201ENST00000473259 CEP170BQ9Y4F5 1589 aaPredicted RBP9.51□□□□□ -0.89
UBFD1P1-201ENST00000473259 ZBTB47Q9UFB7 747 aaPredicted RBP9.51□□□□□ -0.89
UBFD1P1-201ENST00000473259 CAMSAP2Q08AD1 1489 aa9.51□□□□□ -0.89
UBFD1P1-201ENST00000473259 NCOA2Q15596 1464 aa9.51□□□□□ -0.89
UBFD1P1-201ENST00000473259 ZNF335Q9H4Z2 1342 aaPredicted RBP9.51□□□□□ -0.89
UBFD1P1-201ENST00000473259 PTPRTO14522 1441 aa9.5□□□□□ -0.89
UBFD1P1-201ENST00000473259 KIAA1107Q9UPP5 1409 aa9.5□□□□□ -0.89
UBFD1P1-201ENST00000473259 PAK3O75914 559 aaPredicted RBP9.5□□□□□ -0.89
UBFD1P1-201ENST00000473259 FBXO31Q5XUX0 539 aaPredicted RBP9.5□□□□□ -0.89
UBFD1P1-201ENST00000473259 CFAP65Q6ZU64 1925 aaKnown RBP9.49□□□□□ -0.89
UBFD1P1-201ENST00000473259 KANK4Q5T7N3 995 aaPredicted RBP9.49□□□□□ -0.89
UBFD1P1-201ENST00000473259 NEURL4Q96JN8 1562 aa9.49□□□□□ -0.89
UBFD1P1-201ENST00000473259 DNMT1P26358 1616 aaKnown RBP9.49□□□□□ -0.89
UBFD1P1-201ENST00000473259 CNTLNQ9NXG0 1405 aa9.48□□□□□ -0.89
UBFD1P1-201ENST00000473259 ZRANB1Q9UGI0 708 aa9.48□□□□□ -0.89
UBFD1P1-201ENST00000473259 ESF1Q9H501 851 aaKnown RBP9.47□□□□□ -0.89
UBFD1P1-201ENST00000473259 CEP152O94986 1710 aa9.47□□□□□ -0.89
UBFD1P1-201ENST00000473259 NPATQ14207 1427 aa9.47□□□□□ -0.89
UBFD1P1-201ENST00000473259 PLEKHH2Q8IVE3 1493 aa9.47□□□□□ -0.89
UBFD1P1-201ENST00000473259 MROH1Q8NDA8 1641 aa9.46□□□□□ -0.89
UBFD1P1-201ENST00000473259 POLR1AO95602 1720 aaPredicted RBP9.46□□□□□ -0.89
UBFD1P1-201ENST00000473259 STRCP1A6NGW2 1772 aa9.46□□□□□ -0.9
UBFD1P1-201ENST00000473259 TCOF1Q13428 1488 aaKnown RBP9.46□□□□□ -0.9
UBFD1P1-201ENST00000473259 CCDC141Q6ZP82 1450 aa9.46□□□□□ -0.9
UBFD1P1-201ENST00000473259 VASPP50552 380 aaPredicted RBP9.45□□□□□ -0.9
UBFD1P1-201ENST00000473259 DHX29Q7Z478 1369 aaKnown RBP9.45□□□□□ -0.9
UBFD1P1-201ENST00000473259 KIF3BO15066 747 aa9.44□□□□□ -0.9
UBFD1P1-201ENST00000473259 LRRC9Q6ZRR7 1453 aa9.44□□□□□ -0.9
UBFD1P1-201ENST00000473259 SPATA31D1Q6ZQQ2 1576 aa9.44□□□□□ -0.9
UBFD1P1-201ENST00000473259 ALKQ9UM73 1620 aa9.43□□□□□ -0.9
UBFD1P1-201ENST00000473259 ARHGEF5Q12774 1597 aa9.43□□□□□ -0.9
UBFD1P1-201ENST00000473259 A2ML1A8K2U0 1454 aa9.43□□□□□ -0.9
UBFD1P1-201ENST00000473259 DISP3Q9P2K9 1392 aa9.43□□□□□ -0.9
UBFD1P1-201ENST00000473259 KDM5DQ9BY66 1539 aa9.42□□□□□ -0.9
UBFD1P1-201ENST00000473259 RTEL1-TNFRSF6BF6WH68 1400 aa9.42□□□□□ -0.9
UBFD1P1-201ENST00000473259 VPS8Q8N3P4 1428 aa9.42□□□□□ -0.9
UBFD1P1-201ENST00000473259 CLCN6P51797 869 aa9.42□□□□□ -0.9
UBFD1P1-201ENST00000473259 RNF17Q9BXT8 1623 aaKnown RBP9.42□□□□□ -0.9
UBFD1P1-201ENST00000473259 PLA2R1Q13018 1463 aa9.41□□□□□ -0.9
UBFD1P1-201ENST00000473259 GABBR2O75899 941 aa9.41□□□□□ -0.9
UBFD1P1-201ENST00000473259 KLHL34Q8N239 644 aa9.41□□□□□ -0.9
UBFD1P1-201ENST00000473259 VWDEQ8N2E2 1590 aa9.41□□□□□ -0.9
UBFD1P1-201ENST00000473259 ABCC3O15438 1527 aa9.41□□□□□ -0.9
UBFD1P1-201ENST00000473259 PZPP20742 1482 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms