RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 ANKRD50Q9ULJ7 1429 aa31.45■■■□□ 2.63
TOP3A-204ENST00000472959 FER1L4A9Z1Z3 1794 aa31.44■■■□□ 2.62
TOP3A-204ENST00000472959 RIMS1Q86UR5 1692 aaKnown RBP31.42■■■□□ 2.62
TOP3A-204ENST00000472959 FAM135AQ9P2D6 1515 aa31.4■■■□□ 2.62
TOP3A-204ENST00000472959 RNF17Q9BXT8 1623 aaKnown RBP31.4■■■□□ 2.62
TOP3A-204ENST00000472959 WASHC2CQ9Y4E1 1318 aa31.39■■■□□ 2.62
TOP3A-204ENST00000472959 ZMYM3Q14202 1370 aa31.35■■■□□ 2.61
TOP3A-204ENST00000472959 CEBPAP49715 358 aaPredicted RBP31.33■■■□□ 2.61
TOP3A-204ENST00000472959 KDM5DQ9BY66 1539 aa31.33■■■□□ 2.61
TOP3A-204ENST00000472959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.32■■■□□ 2.6
TOP3A-204ENST00000472959 KANK1Q14678 1352 aa31.31■■■□□ 2.6
TOP3A-204ENST00000472959 PLPPR3Q6T4P5 718 aa31.31■■■□□ 2.6
TOP3A-204ENST00000472959 MROH1Q8NDA8 1641 aa31.31■■■□□ 2.6
TOP3A-204ENST00000472959 HFM1A2PYH4 1435 aa31.3■■■□□ 2.6
TOP3A-204ENST00000472959 NAIPQ13075 1403 aa31.3■■■□□ 2.6
TOP3A-204ENST00000472959 PRDM15P57071 1507 aaPredicted RBP31.29■■■□□ 2.6
TOP3A-204ENST00000472959 MROH2AA6NES4 1674 aa31.29■■■□□ 2.6
TOP3A-204ENST00000472959 DEPDC5O75140 1603 aa31.28■■■□□ 2.6
TOP3A-204ENST00000472959 CLTCQ00610 1675 aaKnown RBP31.28■■■□□ 2.6
TOP3A-204ENST00000472959 ABCC3O15438 1527 aa31.26■■■□□ 2.59
TOP3A-204ENST00000472959 NPATQ14207 1427 aa31.22■■■□□ 2.59
TOP3A-204ENST00000472959 C3P01024 1663 aa31.22■■■□□ 2.59
TOP3A-204ENST00000472959 ZC3H13Q5T200 1668 aaKnown RBP31.22■■■□□ 2.59
TOP3A-204ENST00000472959 VWDEQ8N2E2 1590 aa31.19■■■□□ 2.58
TOP3A-204ENST00000472959 PZPP20742 1482 aa31.18■■■□□ 2.58
TOP3A-204ENST00000472959 GCC2Q8IWJ2 1684 aa31.17■■■□□ 2.58
TOP3A-204ENST00000472959 LMTK2Q8IWU2 1503 aa31.17■■■□□ 2.58
TOP3A-204ENST00000472959 UNC13BO14795 1591 aa31.17■■■□□ 2.58
TOP3A-204ENST00000472959 NUP155O75694 1391 aa31.15■■■□□ 2.58
TOP3A-204ENST00000472959 ARHGAP31Q2M1Z3 1444 aa31.15■■■□□ 2.58
TOP3A-204ENST00000472959 FBXO31Q5XUX0 539 aaPredicted RBP31.12■■■□□ 2.57
TOP3A-204ENST00000472959 CEP152O94986 1710 aa31.1■■■□□ 2.57
TOP3A-204ENST00000472959 CAMSAP1Q5T5Y3 1602 aa31.09■■■□□ 2.57
TOP3A-204ENST00000472959 ACIN1Q9UKV3 1341 aaKnown RBP31.09■■■□□ 2.57
TOP3A-204ENST00000472959 SETD1BQ9UPS6 1966 aaKnown RBP31.09■■■□□ 2.57
TOP3A-204ENST00000472959 SETD5Q9C0A6 1442 aa31.08■■■□□ 2.57
TOP3A-204ENST00000472959 UHRF1BP1Q6BDS2 1440 aa31.07■■■□□ 2.56
TOP3A-204ENST00000472959 TNRQ92752 1358 aa31.05■■■□□ 2.56
TOP3A-204ENST00000472959 TRIM52Q96A61 297 aa31.04■■■□□ 2.56
TOP3A-204ENST00000472959 IQGAP3Q86VI3 1631 aa31.04■■■□□ 2.56
TOP3A-204ENST00000472959 EFCAB6Q5THR3 1501 aa31.03■■■□□ 2.56
TOP3A-204ENST00000472959 LMTK3Q96Q04 1460 aa31.03■■■□□ 2.56
TOP3A-204ENST00000472959 ERVK-7P63135 1459 aa31.02■■■□□ 2.56
TOP3A-204ENST00000472959 RPRD2Q5VT52 1461 aaKnown RBP31.01■■■□□ 2.56
TOP3A-204ENST00000472959 TET3O43151 1660 aa31■■■□□ 2.55
TOP3A-204ENST00000472959 PREX1Q8TCU6 1659 aa31■■■□□ 2.55
TOP3A-204ENST00000472959 SPATA31D1Q6ZQQ2 1576 aa31■■■□□ 2.55
TOP3A-204ENST00000472959 TRIM26Q12899 539 aaPredicted RBP30.98■■■□□ 2.55
TOP3A-204ENST00000472959 RAB3GAP2Q9H2M9 1393 aa30.96■■■□□ 2.55
TOP3A-204ENST00000472959 HRCP23327 699 aa30.95■■■□□ 2.55
TOP3A-204ENST00000472959 NLRP1Q9C000 1473 aa30.95■■■□□ 2.54
TOP3A-204ENST00000472959 NOS1P29475 1434 aa30.93■■■□□ 2.54
TOP3A-204ENST00000472959 A2ML1A8K2U0 1454 aa30.91■■■□□ 2.54
TOP3A-204ENST00000472959 HSPA2P54652 639 aa30.91■■■□□ 2.54
TOP3A-204ENST00000472959 SLC4A1APQ9BWU0 796 aaKnown RBP30.91■■■□□ 2.54
TOP3A-204ENST00000472959 MYO3AQ8NEV4 1616 aa30.91■■■□□ 2.54
TOP3A-204ENST00000472959 CEP170BQ9Y4F5 1589 aaPredicted RBP30.88■■■□□ 2.53
TOP3A-204ENST00000472959 SLC52A1Q9NWF4 448 aa30.87■■■□□ 2.53
TOP3A-204ENST00000472959 E9PCH4 1651 aa30.85■■■□□ 2.53
TOP3A-204ENST00000472959 PKD2Q13563 968 aa30.85■■■□□ 2.53
TOP3A-204ENST00000472959 MPHOSPH9Q99550 1183 aa30.84■■■□□ 2.53
TOP3A-204ENST00000472959 CFAP65Q6ZU64 1925 aaKnown RBP30.84■■■□□ 2.53
TOP3A-204ENST00000472959 ZNF142P52746 1687 aaPredicted RBP30.84■■■□□ 2.53
TOP3A-204ENST00000472959 IDI1Q13907 227 aa30.82■■■□□ 2.52
TOP3A-204ENST00000472959 THEMISQ8N1K5 641 aaPredicted RBP30.82■■■□□ 2.52
TOP3A-204ENST00000472959 SYNMO15061 1565 aa30.8■■■□□ 2.52
TOP3A-204ENST00000472959 PTPRTO14522 1441 aa30.79■■■□□ 2.52
TOP3A-204ENST00000472959 UGGT1Q9NYU2 1555 aa30.78■■■□□ 2.52
TOP3A-204ENST00000472959 STAG3Q9UJ98 1225 aa30.75■■■□□ 2.51
TOP3A-204ENST00000472959 PLA2R1Q13018 1463 aa30.74■■■□□ 2.51
TOP3A-204ENST00000472959 FOXD1Q16676 465 aa30.68■■■□□ 2.5
TOP3A-204ENST00000472959 ILDR1Q86SU0 546 aaPredicted RBP30.68■■■□□ 2.5
TOP3A-204ENST00000472959 DMRT2Q9Y5R5 561 aa30.68■■■□□ 2.5
TOP3A-204ENST00000472959 PIK3C2BO00750 1634 aa30.68■■■□□ 2.5
TOP3A-204ENST00000472959 ANKLE2Q86XL3 938 aa30.67■■■□□ 2.5
TOP3A-204ENST00000472959 TRPM2O94759 1503 aa30.67■■■□□ 2.5
TOP3A-204ENST00000472959 SPHKAPQ2M3C7 1700 aa30.67■■■□□ 2.5
TOP3A-204ENST00000472959 UBR1Q8IWV7 1749 aa30.65■■■□□ 2.5
TOP3A-204ENST00000472959 KDM5AP29375 1690 aaKnown RBP30.65■■■□□ 2.5
TOP3A-204ENST00000472959 ADGRB3O60242 1522 aa30.64■■■□□ 2.5
TOP3A-204ENST00000472959 NCKAP5LQ9HCH0 1330 aa30.63■■■□□ 2.49
TOP3A-204ENST00000472959 CHGAP10645 457 aaKnown RBP30.62■■■□□ 2.49
TOP3A-204ENST00000472959 TMEM2Q9UHN6 1383 aa30.62■■■□□ 2.49
TOP3A-204ENST00000472959 SLIT1O75093 1534 aa30.6■■■□□ 2.49
TOP3A-204ENST00000472959 ARHGAP23Q9P227 1491 aa30.6■■■□□ 2.49
TOP3A-204ENST00000472959 EID1Q9Y6B2 187 aa30.59■■■□□ 2.49
TOP3A-204ENST00000472959 STRCQ7RTU9 1775 aa30.59■■■□□ 2.49
TOP3A-204ENST00000472959 TXNDC2Q86VQ3 553 aa30.57■■■□□ 2.48
TOP3A-204ENST00000472959 TMEM131LA2VDJ0 1609 aa30.57■■■□□ 2.48
TOP3A-204ENST00000472959 HDGFP51858 240 aaKnown RBP30.56■■■□□ 2.48
TOP3A-204ENST00000472959 CCDC144AA2RUR9 1427 aa30.56■■■□□ 2.48
TOP3A-204ENST00000472959 CLTCL1P53675 1640 aa30.55■■■□□ 2.48
TOP3A-204ENST00000472959 SCAF11Q99590 1463 aaKnown RBP30.53■■■□□ 2.48
TOP3A-204ENST00000472959 LTKP29376 864 aa30.53■■■□□ 2.48
TOP3A-204ENST00000472959 PCGF6Q9BYE7 350 aa30.51■■■□□ 2.47
TOP3A-204ENST00000472959 ANKRD30BQ9BXX2 1392 aa30.51■■■□□ 2.47
TOP3A-204ENST00000472959 MED14O60244 1454 aa30.5■■■□□ 2.47
TOP3A-204ENST00000472959 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.5■■■□□ 2.47
TOP3A-204ENST00000472959 NPHP4O75161 1426 aaPredicted RBP30.48■■■□□ 2.47
TOP3A-204ENST00000472959 ZFYVE9O95405 1425 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms