RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 GGT6Q6P531 493 aa30.14■■■□□ 2.42
SF1-213ENST00000472725 HFM1A2PYH4 1435 aa30.13■■■□□ 2.41
SF1-213ENST00000472725 DEPDC5O75140 1603 aa30.12■■■□□ 2.41
SF1-213ENST00000472725 GCC2Q8IWJ2 1684 aa30.12■■■□□ 2.41
SF1-213ENST00000472725 ESF1Q9H501 851 aaKnown RBP30.12■■■□□ 2.41
SF1-213ENST00000472725 PRDM15P57071 1507 aaPredicted RBP30.09■■■□□ 2.41
SF1-213ENST00000472725 NAIPQ13075 1403 aa30.09■■■□□ 2.41
SF1-213ENST00000472725 RIMS1Q86UR5 1692 aaKnown RBP30.09■■■□□ 2.41
SF1-213ENST00000472725 MROH2AA6NES4 1674 aa30.08■■■□□ 2.41
SF1-213ENST00000472725 MROH1Q8NDA8 1641 aa30.07■■■□□ 2.4
SF1-213ENST00000472725 KDM5DQ9BY66 1539 aa30.06■■■□□ 2.4
SF1-213ENST00000472725 ZC3H13Q5T200 1668 aaKnown RBP30.06■■■□□ 2.4
SF1-213ENST00000472725 PTPRMP28827 1452 aa30.06■■■□□ 2.4
SF1-213ENST00000472725 KANK1Q14678 1352 aa30.03■■■□□ 2.4
SF1-213ENST00000472725 CLTCQ00610 1675 aaKnown RBP30.02■■■□□ 2.4
SF1-213ENST00000472725 WASHC2CQ9Y4E1 1318 aa30.01■■■□□ 2.4
SF1-213ENST00000472725 UNC13BO14795 1591 aa30.01■■■□□ 2.39
SF1-213ENST00000472725 ACIN1Q9UKV3 1341 aaKnown RBP30■■■□□ 2.39
SF1-213ENST00000472725 VWDEQ8N2E2 1590 aa29.99■■■□□ 2.39
SF1-213ENST00000472725 ABCC3O15438 1527 aa29.98■■■□□ 2.39
SF1-213ENST00000472725 ZMYM3Q14202 1370 aa29.97■■■□□ 2.39
SF1-213ENST00000472725 LMTK2Q8IWU2 1503 aa29.96■■■□□ 2.39
SF1-213ENST00000472725 C3P01024 1663 aa29.95■■■□□ 2.38
SF1-213ENST00000472725 TRIM26Q12899 539 aaPredicted RBP29.93■■■□□ 2.38
SF1-213ENST00000472725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.93■■■□□ 2.383e-26■■■□□ 18.5
SF1-213ENST00000472725 CEP152O94986 1710 aa29.92■■■□□ 2.38
SF1-213ENST00000472725 SETD5Q9C0A6 1442 aa29.92■■■□□ 2.38
SF1-213ENST00000472725 CAMSAP1Q5T5Y3 1602 aa29.89■■■□□ 2.38
SF1-213ENST00000472725 IQGAP3Q86VI3 1631 aa29.89■■■□□ 2.38
SF1-213ENST00000472725 ARHGAP31Q2M1Z3 1444 aa29.89■■■□□ 2.38
SF1-213ENST00000472725 AEBP2Q6ZN18 517 aaPredicted RBP29.89■■■□□ 2.38
SF1-213ENST00000472725 PZPP20742 1482 aa29.88■■■□□ 2.37
SF1-213ENST00000472725 NPATQ14207 1427 aa29.88■■■□□ 2.37
SF1-213ENST00000472725 SETD1BQ9UPS6 1966 aaKnown RBP29.87■■■□□ 2.37
SF1-213ENST00000472725 NUP155O75694 1391 aa29.87■■■□□ 2.37
SF1-213ENST00000472725 TET3O43151 1660 aa29.85■■■□□ 2.37
SF1-213ENST00000472725 HRCP23327 699 aa29.84■■■□□ 2.37
SF1-213ENST00000472725 CEBPAP49715 358 aaPredicted RBP29.83■■■□□ 2.37
SF1-213ENST00000472725 EFCAB6Q5THR3 1501 aa29.81■■■□□ 2.36
SF1-213ENST00000472725 RPRD2Q5VT52 1461 aaKnown RBP29.8■■■□□ 2.36
SF1-213ENST00000472725 RAB3GAP2Q9H2M9 1393 aa29.78■■■□□ 2.36
SF1-213ENST00000472725 SPATA31D1Q6ZQQ2 1576 aa29.75■■■□□ 2.35
SF1-213ENST00000472725 TRIM52Q96A61 297 aa29.75■■■□□ 2.35
SF1-213ENST00000472725 PLPPR3Q6T4P5 718 aa29.74■■■□□ 2.35
SF1-213ENST00000472725 PREX1Q8TCU6 1659 aa29.73■■■□□ 2.35
SF1-213ENST00000472725 ERVK-7P63135 1459 aa29.73■■■□□ 2.35
SF1-213ENST00000472725 TNRQ92752 1358 aa29.7■■■□□ 2.35
SF1-213ENST00000472725 E9PCH4 1651 aa29.69■■■□□ 2.34
SF1-213ENST00000472725 FBXO31Q5XUX0 539 aaPredicted RBP29.69■■■□□ 2.34
SF1-213ENST00000472725 CFAP65Q6ZU64 1925 aaKnown RBP29.69■■■□□ 2.34
SF1-213ENST00000472725 UHRF1BP1Q6BDS2 1440 aa29.68■■■□□ 2.34
SF1-213ENST00000472725 NOS1P29475 1434 aa29.66■■■□□ 2.34
SF1-213ENST00000472725 SLC4A1APQ9BWU0 796 aaKnown RBP29.65■■■□□ 2.34
SF1-213ENST00000472725 NLRP1Q9C000 1473 aa29.65■■■□□ 2.34
SF1-213ENST00000472725 MYO3AQ8NEV4 1616 aa29.64■■■□□ 2.34
SF1-213ENST00000472725 ZNF142P52746 1687 aaPredicted RBP29.62■■■□□ 2.33
SF1-213ENST00000472725 LMTK3Q96Q04 1460 aa29.61■■■□□ 2.33
SF1-213ENST00000472725 MPHOSPH9Q99550 1183 aa29.6■■■□□ 2.33
SF1-213ENST00000472725 A2ML1A8K2U0 1454 aa29.59■■■□□ 2.33
SF1-213ENST00000472725 PKD2Q13563 968 aa29.58■■■□□ 2.33
SF1-213ENST00000472725 SLC52A1Q9NWF4 448 aa29.58■■■□□ 2.33
SF1-213ENST00000472725 CEP170BQ9Y4F5 1589 aaPredicted RBP29.57■■■□□ 2.32
SF1-213ENST00000472725 PTPRTO14522 1441 aa29.57■■■□□ 2.32
SF1-213ENST00000472725 SYNMO15061 1565 aa29.56■■■□□ 2.32
SF1-213ENST00000472725 SPHKAPQ2M3C7 1700 aa29.56■■■□□ 2.32
SF1-213ENST00000472725 KDM5AP29375 1690 aaKnown RBP29.53■■■□□ 2.32
SF1-213ENST00000472725 PIK3C2BO00750 1634 aa29.51■■■□□ 2.31
SF1-213ENST00000472725 TRPM2O94759 1503 aa29.5■■■□□ 2.31
SF1-213ENST00000472725 UGGT1Q9NYU2 1555 aa29.48■■■□□ 2.31
SF1-213ENST00000472725 IDI1Q13907 227 aa29.47■■■□□ 2.31
SF1-213ENST00000472725 THEMISQ8N1K5 641 aaPredicted RBP29.46■■■□□ 2.31
SF1-213ENST00000472725 UBR1Q8IWV7 1749 aa29.45■■■□□ 2.3
SF1-213ENST00000472725 PLA2R1Q13018 1463 aa29.43■■■□□ 2.3
SF1-213ENST00000472725 PCGF6Q9BYE7 350 aa29.43■■■□□ 2.3
SF1-213ENST00000472725 ADGRB3O60242 1522 aa29.41■■■□□ 2.3
SF1-213ENST00000472725 STAG3Q9UJ98 1225 aa29.39■■■□□ 2.3
SF1-213ENST00000472725 HSPA2P54652 639 aa29.38■■■□□ 2.29
SF1-213ENST00000472725 FOXD1Q16676 465 aa29.37■■■□□ 2.29
SF1-213ENST00000472725 TMEM131LA2VDJ0 1609 aa29.37■■■□□ 2.29
SF1-213ENST00000472725 CLTCL1P53675 1640 aa29.37■■■□□ 2.29
SF1-213ENST00000472725 KIF1BO60333 1816 aa29.35■■■□□ 2.29
SF1-213ENST00000472725 CCDC144AA2RUR9 1427 aa29.35■■■□□ 2.29
SF1-213ENST00000472725 SLIT1O75093 1534 aa29.34■■■□□ 2.29
SF1-213ENST00000472725 ANKRD30BQ9BXX2 1392 aa29.33■■■□□ 2.29
SF1-213ENST00000472725 ARHGAP23Q9P227 1491 aa29.32■■■□□ 2.28
SF1-213ENST00000472725 TMEM2Q9UHN6 1383 aa29.3■■■□□ 2.28
SF1-213ENST00000472725 MYO5BQ9ULV0 1848 aa29.29■■■□□ 2.28
SF1-213ENST00000472725 NEURL4Q96JN8 1562 aa29.29■■■□□ 2.28
SF1-213ENST00000472725 STRCQ7RTU9 1775 aa29.29■■■□□ 2.28
SF1-213ENST00000472725 HDGFP51858 240 aaKnown RBP29.28■■■□□ 2.28
SF1-213ENST00000472725 ANKLE2Q86XL3 938 aa29.28■■■□□ 2.28
SF1-213ENST00000472725 POLR1AO95602 1720 aaPredicted RBP29.27■■■□□ 2.28
SF1-213ENST00000472725 DHX57Q6P158 1386 aaKnown RBP29.26■■■□□ 2.28
SF1-213ENST00000472725 CHGAP10645 457 aaKnown RBP29.26■■■□□ 2.27
SF1-213ENST00000472725 DMRT2Q9Y5R5 561 aa29.26■■■□□ 2.27
SF1-213ENST00000472725 EID1Q9Y6B2 187 aa29.24■■■□□ 2.27
SF1-213ENST00000472725 MED14O60244 1454 aa29.22■■■□□ 2.27
SF1-213ENST00000472725 SCAF11Q99590 1463 aaKnown RBP29.22■■■□□ 2.27
SF1-213ENST00000472725 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.21■■■□□ 2.27
SF1-213ENST00000472725 ZFYVE9O95405 1425 aa29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms