RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 NCOA2Q15596 1464 aa16.16■□□□□ 0.18
SCAMP3-205ENST00000472397 TNRQ92752 1358 aa16.15■□□□□ 0.18
SCAMP3-205ENST00000472397 CAMSAP2Q08AD1 1489 aa16.15■□□□□ 0.18
SCAMP3-205ENST00000472397 TCOF1Q13428 1488 aaKnown RBP16.15■□□□□ 0.18
SCAMP3-205ENST00000472397 ZNF142P52746 1687 aaPredicted RBP16.14■□□□□ 0.18
SCAMP3-205ENST00000472397 DNMT1P26358 1616 aaKnown RBP16.14■□□□□ 0.17
SCAMP3-205ENST00000472397 A2ML1A8K2U0 1454 aa16.14■□□□□ 0.17
SCAMP3-205ENST00000472397 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.13■□□□□ 0.17
SCAMP3-205ENST00000472397 HSPA1LP34931 641 aa16.13■□□□□ 0.17
SCAMP3-205ENST00000472397 PLA2R1Q13018 1463 aa16.13■□□□□ 0.17
SCAMP3-205ENST00000472397 CCDC141Q6ZP82 1450 aa16.12■□□□□ 0.17
SCAMP3-205ENST00000472397 IQSEC2Q5JU85 1478 aa16.11■□□□□ 0.17
SCAMP3-205ENST00000472397 RTEL1-TNFRSF6BF6WH68 1400 aa16.11■□□□□ 0.17
SCAMP3-205ENST00000472397 TSPY4P0CV99 314 aa16.09■□□□□ 0.17
SCAMP3-205ENST00000472397 TSPY10P0CW01 314 aa16.09■□□□□ 0.17
SCAMP3-205ENST00000472397 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
SCAMP3-205ENST00000472397 ANKLE2Q86XL3 938 aa16.08■□□□□ 0.16
SCAMP3-205ENST00000472397 KDM5DQ9BY66 1539 aa16.07■□□□□ 0.16
SCAMP3-205ENST00000472397 NEURL4Q96JN8 1562 aa16.07■□□□□ 0.16
SCAMP3-205ENST00000472397 PZPP20742 1482 aa16.06■□□□□ 0.16
SCAMP3-205ENST00000472397 MIA2Q96PC5 1412 aa16.06■□□□□ 0.16
SCAMP3-205ENST00000472397 SHANK2Q9UPX8 1470 aa16.05■□□□□ 0.16
SCAMP3-205ENST00000472397 TOM1O60784 492 aa16.04■□□□□ 0.16
SCAMP3-205ENST00000472397 THEMISQ8N1K5 641 aaPredicted RBP16.04■□□□□ 0.16
SCAMP3-205ENST00000472397 POLR1AO95602 1720 aaPredicted RBP16.03■□□□□ 0.16
SCAMP3-205ENST00000472397 NPHP4O75161 1426 aaPredicted RBP16.02■□□□□ 0.16
SCAMP3-205ENST00000472397 UGGT1Q9NYU2 1555 aa16.02■□□□□ 0.16
SCAMP3-205ENST00000472397 RSPH4AQ5TD94 716 aa16.02■□□□□ 0.16
SCAMP3-205ENST00000472397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.16
SCAMP3-205ENST00000472397 CFAP65Q6ZU64 1925 aaKnown RBP16.02■□□□□ 0.15
SCAMP3-205ENST00000472397 LRRC9Q6ZRR7 1453 aa16.01■□□□□ 0.15
SCAMP3-205ENST00000472397 VWDEQ8N2E2 1590 aa16■□□□□ 0.15
SCAMP3-205ENST00000472397 FAM135AQ9P2D6 1515 aa15.99■□□□□ 0.15
SCAMP3-205ENST00000472397 RRP7BPQ9NSQ0 103 aa15.99■□□□□ 0.15
SCAMP3-205ENST00000472397 ARHGEF5Q12774 1597 aa15.99■□□□□ 0.15
SCAMP3-205ENST00000472397 ABCC3O15438 1527 aa15.99■□□□□ 0.15
SCAMP3-205ENST00000472397 VPS8Q8N3P4 1428 aa15.97■□□□□ 0.15
SCAMP3-205ENST00000472397 CPS1P31327 1500 aa15.97■□□□□ 0.15
SCAMP3-205ENST00000472397 NLRP1Q9C000 1473 aa15.97■□□□□ 0.15
SCAMP3-205ENST00000472397 MED1Q15648 1581 aaPredicted RBP15.96■□□□□ 0.15
SCAMP3-205ENST00000472397 CHIC2Q9UKJ5 165 aa15.96■□□□□ 0.15
SCAMP3-205ENST00000472397 CEP152O94986 1710 aa15.96■□□□□ 0.15
SCAMP3-205ENST00000472397 LTKP29376 864 aa15.95■□□□□ 0.14
SCAMP3-205ENST00000472397 ERVK-7P63135 1459 aa15.95■□□□□ 0.14
SCAMP3-205ENST00000472397 STRCP1A6NGW2 1772 aa15.95■□□□□ 0.14
SCAMP3-205ENST00000472397 TXNDC2Q86VQ3 553 aa15.94■□□□□ 0.14
SCAMP3-205ENST00000472397 RBM33Q96EV2 1170 aaKnown RBP15.94■□□□□ 0.14
SCAMP3-205ENST00000472397 ALKQ9UM73 1620 aa15.94■□□□□ 0.14
SCAMP3-205ENST00000472397 IQGAP1P46940 1657 aa15.93■□□□□ 0.14
SCAMP3-205ENST00000472397 MROH1Q8NDA8 1641 aa15.93■□□□□ 0.14
SCAMP3-205ENST00000472397 LRRC7Q96NW7 1537 aa15.92■□□□□ 0.14
SCAMP3-205ENST00000472397 MYOM3Q5VTT5 1437 aa15.92■□□□□ 0.14
SCAMP3-205ENST00000472397 RNF17Q9BXT8 1623 aaKnown RBP15.91■□□□□ 0.14
SCAMP3-205ENST00000472397 MAST1Q9Y2H9 1570 aa15.91■□□□□ 0.14
SCAMP3-205ENST00000472397 MED14O60244 1454 aa15.91■□□□□ 0.14
SCAMP3-205ENST00000472397 KIF15Q9NS87 1388 aa15.89■□□□□ 0.13
SCAMP3-205ENST00000472397 ABCC5O15440 1437 aa15.89■□□□□ 0.13
SCAMP3-205ENST00000472397 STAG3Q9UJ98 1225 aa15.89■□□□□ 0.13
SCAMP3-205ENST00000472397 DEPDC5O75140 1603 aa15.89■□□□□ 0.13
SCAMP3-205ENST00000472397 UBR1Q8IWV7 1749 aa15.87■□□□□ 0.13
SCAMP3-205ENST00000472397 SCAF11Q99590 1463 aaKnown RBP15.86■□□□□ 0.13
SCAMP3-205ENST00000472397 DUOX2Q9NRD8 1548 aa15.86■□□□□ 0.13
SCAMP3-205ENST00000472397 APLP2Q06481 763 aa15.86■□□□□ 0.13
SCAMP3-205ENST00000472397 SLC26A8Q96RN1 970 aa15.86■□□□□ 0.13
SCAMP3-205ENST00000472397 ZC3H13Q5T200 1668 aaKnown RBP15.86■□□□□ 0.13
SCAMP3-205ENST00000472397 BCANQ96GW7 911 aa15.85■□□□□ 0.13
SCAMP3-205ENST00000472397 EIF2AK4Q9P2K8 1649 aaKnown RBP15.85■□□□□ 0.13
SCAMP3-205ENST00000472397 EID1Q9Y6B2 187 aa15.84■□□□□ 0.13
SCAMP3-205ENST00000472397 PTPN23Q9H3S7 1636 aa15.83■□□□□ 0.13
SCAMP3-205ENST00000472397 IDI1Q13907 227 aa15.83■□□□□ 0.12
SCAMP3-205ENST00000472397 PIK3C2BO00750 1634 aa15.83■□□□□ 0.12
SCAMP3-205ENST00000472397 DAPK1P53355 1430 aa15.82■□□□□ 0.12
SCAMP3-205ENST00000472397 FAM50AQ14320 339 aaKnown RBP15.81■□□□□ 0.12
SCAMP3-205ENST00000472397 RGS17Q9UGC6 210 aaPredicted RBP15.8■□□□□ 0.12
SCAMP3-205ENST00000472397 ARHGAP23Q9P227 1491 aa15.79■□□□□ 0.12
SCAMP3-205ENST00000472397 KANK1Q14678 1352 aa15.79■□□□□ 0.12
SCAMP3-205ENST00000472397 TMEM2Q9UHN6 1383 aa15.79■□□□□ 0.12
SCAMP3-205ENST00000472397 PROSER2Q86WR7 435 aaPredicted RBP15.79■□□□□ 0.12
SCAMP3-205ENST00000472397 CROCC2H7BZ55 1655 aa15.79■□□□□ 0.12
SCAMP3-205ENST00000472397 MAP3K1Q13233 1512 aa15.78■□□□□ 0.12
SCAMP3-205ENST00000472397 ERBINQ96RT1 1412 aa15.78■□□□□ 0.12
SCAMP3-205ENST00000472397 PRDM15P57071 1507 aaPredicted RBP15.78■□□□□ 0.12
SCAMP3-205ENST00000472397 TMEM94Q12767 1356 aa15.77■□□□□ 0.12
SCAMP3-205ENST00000472397 NUTM2DQ5VT03 806 aaPredicted RBP15.77■□□□□ 0.12
SCAMP3-205ENST00000472397 SYNMO15061 1565 aa15.77■□□□□ 0.11
SCAMP3-205ENST00000472397 SLIT1O75093 1534 aa15.77■□□□□ 0.11
SCAMP3-205ENST00000472397 XIRP1Q702N8 1843 aaKnown RBP15.77■□□□□ 0.11
SCAMP3-205ENST00000472397 FGD6Q6ZV73 1430 aa15.77■□□□□ 0.11
SCAMP3-205ENST00000472397 CHGAP10645 457 aaKnown RBP15.76■□□□□ 0.11
SCAMP3-205ENST00000472397 ARHGAP31Q2M1Z3 1444 aa15.76■□□□□ 0.11
SCAMP3-205ENST00000472397 ANKRD30AQ9BXX3 1397 aa15.75■□□□□ 0.11
SCAMP3-205ENST00000472397 EFCAB6Q5THR3 1501 aa15.73■□□□□ 0.11
SCAMP3-205ENST00000472397 KCNA6P17658 529 aa15.73■□□□□ 0.11
SCAMP3-205ENST00000472397 PPARGC1BQ86YN6 1023 aaKnown RBP15.73■□□□□ 0.11
SCAMP3-205ENST00000472397 POTEAQ6S8J7 498 aa15.72■□□□□ 0.11
SCAMP3-205ENST00000472397 PPP1R15AO75807 674 aaPredicted RBP15.7■□□□□ 0.1
SCAMP3-205ENST00000472397 ITGAEP38570 1179 aa15.7■□□□□ 0.1
SCAMP3-205ENST00000472397 NOS1P29475 1434 aa15.68■□□□□ 0.1
SCAMP3-205ENST00000472397 TET3O43151 1660 aa15.67■□□□□ 0.1
SCAMP3-205ENST00000472397 ADGRB3O60242 1522 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms