RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 PPP6R1Q9UPN7 881 aa24.06■■□□□ 1.44
PCOLCE-205ENST00000472348 UNC13BO14795 1591 aa24.05■■□□□ 1.44
PCOLCE-205ENST00000472348 SIGLEC1Q9BZZ2 1709 aa24.04■■□□□ 1.44
PCOLCE-205ENST00000472348 PRDM15P57071 1507 aaPredicted RBP24.03■■□□□ 1.44
PCOLCE-205ENST00000472348 KDM5DQ9BY66 1539 aa24■■□□□ 1.43
PCOLCE-205ENST00000472348 ZC3H13Q5T200 1668 aaKnown RBP23.99■■□□□ 1.43
PCOLCE-205ENST00000472348 VWDEQ8N2E2 1590 aa23.99■■□□□ 1.43
PCOLCE-205ENST00000472348 MROH1Q8NDA8 1641 aa23.99■■□□□ 1.43
PCOLCE-205ENST00000472348 RAB3GAP2Q9H2M9 1393 aa23.97■■□□□ 1.43
PCOLCE-205ENST00000472348 ARID4BQ4LE39 1312 aaPredicted RBP23.96■■□□□ 1.43
PCOLCE-205ENST00000472348 KIF3BO15066 747 aa23.96■■□□□ 1.43
PCOLCE-205ENST00000472348 IQGAP3Q86VI3 1631 aa23.95■■□□□ 1.43
PCOLCE-205ENST00000472348 PCGF6Q9BYE7 350 aa23.94■■□□□ 1.42
PCOLCE-205ENST00000472348 LMTK2Q8IWU2 1503 aa23.94■■□□□ 1.42
PCOLCE-205ENST00000472348 KANK1Q14678 1352 aa23.91■■□□□ 1.42
PCOLCE-205ENST00000472348 MROH2AA6NES4 1674 aa23.91■■□□□ 1.42
PCOLCE-205ENST00000472348 ADAMTSL3P82987 1691 aa23.91■■□□□ 1.42
PCOLCE-205ENST00000472348 CNTLNQ9NXG0 1405 aa23.9■■□□□ 1.42
PCOLCE-205ENST00000472348 TET3O43151 1660 aa23.87■■□□□ 1.41
PCOLCE-205ENST00000472348 FER1L4A9Z1Z3 1794 aa23.86■■□□□ 1.41
PCOLCE-205ENST00000472348 ABCC3O15438 1527 aa23.85■■□□□ 1.41
PCOLCE-205ENST00000472348 NUP155O75694 1391 aa23.84■■□□□ 1.41
PCOLCE-205ENST00000472348 GGT6Q6P531 493 aa23.84■■□□□ 1.41
PCOLCE-205ENST00000472348 MADDQ8WXG6 1647 aa23.84■■□□□ 1.41
PCOLCE-205ENST00000472348 ARHGAP31Q2M1Z3 1444 aa23.84■■□□□ 1.41
PCOLCE-205ENST00000472348 CEP152O94986 1710 aa23.83■■□□□ 1.41
PCOLCE-205ENST00000472348 RPRD2Q5VT52 1461 aaKnown RBP23.82■■□□□ 1.4
PCOLCE-205ENST00000472348 MLECQ14165 292 aa23.82■■□□□ 1.4
PCOLCE-205ENST00000472348 CAMSAP1Q5T5Y3 1602 aa23.81■■□□□ 1.4
PCOLCE-205ENST00000472348 PZPP20742 1482 aa23.81■■□□□ 1.4
PCOLCE-205ENST00000472348 EFCAB6Q5THR3 1501 aa23.8■■□□□ 1.4
PCOLCE-205ENST00000472348 CLTCQ00610 1675 aaKnown RBP23.8■■□□□ 1.4
PCOLCE-205ENST00000472348 WASHC2CQ9Y4E1 1318 aa23.8■■□□□ 1.4
PCOLCE-205ENST00000472348 PTPRMP28827 1452 aa23.77■■□□□ 1.4
PCOLCE-205ENST00000472348 RIMS1Q86UR5 1692 aaKnown RBP23.76■■□□□ 1.39
PCOLCE-205ENST00000472348 TRIM52Q96A61 297 aa23.76■■□□□ 1.39
PCOLCE-205ENST00000472348 ESF1Q9H501 851 aaKnown RBP23.76■■□□□ 1.39
PCOLCE-205ENST00000472348 E9PCH4 1651 aa23.74■■□□□ 1.39
PCOLCE-205ENST00000472348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.74■■□□□ 1.39
PCOLCE-205ENST00000472348 MPHOSPH9Q99550 1183 aa23.73■■□□□ 1.39
PCOLCE-205ENST00000472348 C3P01024 1663 aa23.71■■□□□ 1.39
PCOLCE-205ENST00000472348 ZMYM3Q14202 1370 aa23.71■■□□□ 1.39
PCOLCE-205ENST00000472348 SLC4A1APQ9BWU0 796 aaKnown RBP23.71■■□□□ 1.39
PCOLCE-205ENST00000472348 NPATQ14207 1427 aa23.69■■□□□ 1.38
PCOLCE-205ENST00000472348 PLPPR3Q6T4P5 718 aa23.69■■□□□ 1.38
PCOLCE-205ENST00000472348 SPATA31D1Q6ZQQ2 1576 aa23.68■■□□□ 1.38
PCOLCE-205ENST00000472348 PREX1Q8TCU6 1659 aa23.67■■□□□ 1.38
PCOLCE-205ENST00000472348 SPHKAPQ2M3C7 1700 aa23.67■■□□□ 1.38
PCOLCE-205ENST00000472348 SETD1BQ9UPS6 1966 aaKnown RBP23.67■■□□□ 1.38
PCOLCE-205ENST00000472348 PTPRTO14522 1441 aa23.67■■□□□ 1.38
PCOLCE-205ENST00000472348 DHX57Q6P158 1386 aaKnown RBP23.66■■□□□ 1.38
PCOLCE-205ENST00000472348 CLSPNQ9HAW4 1339 aa23.65■■□□□ 1.38
PCOLCE-205ENST00000472348 NOS1P29475 1434 aa23.65■■□□□ 1.38
PCOLCE-205ENST00000472348 PKD2Q13563 968 aa23.63■■□□□ 1.37
PCOLCE-205ENST00000472348 TRPM2O94759 1503 aa23.62■■□□□ 1.37
PCOLCE-205ENST00000472348 ERVK-7P63135 1459 aa23.62■■□□□ 1.37
PCOLCE-205ENST00000472348 PIK3C2BO00750 1634 aa23.59■■□□□ 1.37
PCOLCE-205ENST00000472348 KDM5AP29375 1690 aaKnown RBP23.58■■□□□ 1.37
PCOLCE-205ENST00000472348 CFAP65Q6ZU64 1925 aaKnown RBP23.58■■□□□ 1.37
PCOLCE-205ENST00000472348 ANKRD30BQ9BXX2 1392 aa23.57■■□□□ 1.36
PCOLCE-205ENST00000472348 NEURL4Q96JN8 1562 aa23.57■■□□□ 1.36
PCOLCE-205ENST00000472348 CEBPAP49715 358 aaPredicted RBP23.56■■□□□ 1.36
PCOLCE-205ENST00000472348 SLC52A1Q9NWF4 448 aa23.55■■□□□ 1.36
PCOLCE-205ENST00000472348 SYNMO15061 1565 aa23.55■■□□□ 1.36
PCOLCE-205ENST00000472348 PLA2R1Q13018 1463 aa23.55■■□□□ 1.36
PCOLCE-205ENST00000472348 NLRP1Q9C000 1473 aa23.54■■□□□ 1.36
PCOLCE-205ENST00000472348 TNRQ92752 1358 aa23.51■■□□□ 1.35
PCOLCE-205ENST00000472348 KIF1BO60333 1816 aa23.49■■□□□ 1.35
PCOLCE-205ENST00000472348 LMTK3Q96Q04 1460 aa23.49■■□□□ 1.35
PCOLCE-205ENST00000472348 ZNF142P52746 1687 aaPredicted RBP23.49■■□□□ 1.35
PCOLCE-205ENST00000472348 CCDC144AA2RUR9 1427 aa23.49■■□□□ 1.35
PCOLCE-205ENST00000472348 MYO3AQ8NEV4 1616 aa23.48■■□□□ 1.35
PCOLCE-205ENST00000472348 FBXO31Q5XUX0 539 aaPredicted RBP23.47■■□□□ 1.35
PCOLCE-205ENST00000472348 CLTCL1P53675 1640 aa23.47■■□□□ 1.35
PCOLCE-205ENST00000472348 A2ML1A8K2U0 1454 aa23.43■■□□□ 1.34
PCOLCE-205ENST00000472348 FOXD1Q16676 465 aa23.42■■□□□ 1.34
PCOLCE-205ENST00000472348 TMEM131LA2VDJ0 1609 aa23.41■■□□□ 1.34
PCOLCE-205ENST00000472348 HSPA2P54652 639 aa23.41■■□□□ 1.34
PCOLCE-205ENST00000472348 ADGRB3O60242 1522 aa23.41■■□□□ 1.34
PCOLCE-205ENST00000472348 UBR1Q8IWV7 1749 aa23.41■■□□□ 1.34
PCOLCE-205ENST00000472348 CEP170BQ9Y4F5 1589 aaPredicted RBP23.4■■□□□ 1.34
PCOLCE-205ENST00000472348 IDI1Q13907 227 aa23.4■■□□□ 1.34
PCOLCE-205ENST00000472348 CCER1Q8TC90 406 aaPredicted RBP23.39■■□□□ 1.33
PCOLCE-205ENST00000472348 UHRF1BP1Q6BDS2 1440 aa23.39■■□□□ 1.33
PCOLCE-205ENST00000472348 TIMELESSQ9UNS1 1208 aa23.38■■□□□ 1.33
PCOLCE-205ENST00000472348 SPATA31E1Q6ZUB1 1445 aa23.38■■□□□ 1.33
PCOLCE-205ENST00000472348 UGGT1Q9NYU2 1555 aa23.37■■□□□ 1.33
PCOLCE-205ENST00000472348 STAC3Q96MF2 364 aa23.37■■□□□ 1.33
PCOLCE-205ENST00000472348 MYO5BQ9ULV0 1848 aa23.33■■□□□ 1.33
PCOLCE-205ENST00000472348 RPGRIP1LQ68CZ1 1315 aa23.33■■□□□ 1.32
PCOLCE-205ENST00000472348 SLIT1O75093 1534 aa23.32■■□□□ 1.32
PCOLCE-205ENST00000472348 IFT172Q9UG01 1749 aa23.31■■□□□ 1.32
PCOLCE-205ENST00000472348 THEMISQ8N1K5 641 aaPredicted RBP23.31■■□□□ 1.32
PCOLCE-205ENST00000472348 ARHGAP23Q9P227 1491 aa23.3■■□□□ 1.32
PCOLCE-205ENST00000472348 ZFYVE9O95405 1425 aa23.28■■□□□ 1.32
PCOLCE-205ENST00000472348 PPLO60437 1756 aa23.28■■□□□ 1.32
PCOLCE-205ENST00000472348 HDGFP51858 240 aaKnown RBP23.27■■□□□ 1.32
PCOLCE-205ENST00000472348 SIN3AQ96ST3 1273 aa23.25■■□□□ 1.31
PCOLCE-205ENST00000472348 STAG3Q9UJ98 1225 aa23.25■■□□□ 1.31
PCOLCE-205ENST00000472348 TMEM2Q9UHN6 1383 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms