RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 PTPRKQ15262 1439 aa18.55■□□□□ 0.56
CLRN1-205ENST00000472224 ZNF644Q9H582 1327 aaPredicted RBP18.54■□□□□ 0.56
CLRN1-205ENST00000472224 ALKQ9UM73 1620 aa18.54■□□□□ 0.56
CLRN1-205ENST00000472224 HNRNPMP52272 730 aaKnown RBP eCLIP18.54■□□□□ 0.56
CLRN1-205ENST00000472224 PLXNC1O60486 1568 aa18.54■□□□□ 0.56
CLRN1-205ENST00000472224 POLR1AO95602 1720 aaPredicted RBP18.54■□□□□ 0.56
CLRN1-205ENST00000472224 PIP4K2BP78356 416 aa18.52■□□□□ 0.56
CLRN1-205ENST00000472224 DNMT1P26358 1616 aaKnown RBP18.52■□□□□ 0.55
CLRN1-205ENST00000472224 SCAF1Q9H7N4 1312 aaKnown RBP18.51■□□□□ 0.55
CLRN1-205ENST00000472224 NEURL4Q96JN8 1562 aa18.51■□□□□ 0.55
CLRN1-205ENST00000472224 KIAA1107Q9UPP5 1409 aa18.51■□□□□ 0.55
CLRN1-205ENST00000472224 MYOM3Q5VTT5 1437 aa18.5■□□□□ 0.55
CLRN1-205ENST00000472224 CPS1P31327 1500 aa18.49■□□□□ 0.55
CLRN1-205ENST00000472224 INO80Q9ULG1 1556 aaPredicted RBP18.49■□□□□ 0.55
CLRN1-205ENST00000472224 ATP7AQ04656 1500 aa18.49■□□□□ 0.55
CLRN1-205ENST00000472224 SPAG9O60271 1321 aaKnown RBP18.48■□□□□ 0.55
CLRN1-205ENST00000472224 A2ML1A8K2U0 1454 aa18.46■□□□□ 0.55
CLRN1-205ENST00000472224 CCDC141Q6ZP82 1450 aa18.46■□□□□ 0.55
CLRN1-205ENST00000472224 MBD5Q9P267 1494 aa18.46■□□□□ 0.54
CLRN1-205ENST00000472224 SHANK2Q9UPX8 1470 aa18.46■□□□□ 0.54
CLRN1-205ENST00000472224 VWDEQ8N2E2 1590 aa18.45■□□□□ 0.54
CLRN1-205ENST00000472224 PTPN23Q9H3S7 1636 aa18.45■□□□□ 0.54
CLRN1-205ENST00000472224 TOM1O60784 492 aa18.44■□□□□ 0.54
CLRN1-205ENST00000472224 ARHGEF5Q12774 1597 aa18.43■□□□□ 0.54
CLRN1-205ENST00000472224 MIA2Q96PC5 1412 aa18.43■□□□□ 0.54
CLRN1-205ENST00000472224 A2MP01023 1474 aa18.43■□□□□ 0.54
CLRN1-205ENST00000472224 ADGBQ8N7X0 1667 aa18.41■□□□□ 0.54
CLRN1-205ENST00000472224 FGD6Q6ZV73 1430 aa18.4■□□□□ 0.54
CLRN1-205ENST00000472224 PPARGC1BQ86YN6 1023 aaKnown RBP18.39■□□□□ 0.53
CLRN1-205ENST00000472224 STRCP1A6NGW2 1772 aa18.39■□□□□ 0.53
CLRN1-205ENST00000472224 CROCC2H7BZ55 1655 aa18.38■□□□□ 0.53
CLRN1-205ENST00000472224 MAPK8IP2Q13387 824 aaPredicted RBP18.37■□□□□ 0.53
CLRN1-205ENST00000472224 GGT6Q6P531 493 aa18.37■□□□□ 0.53
CLRN1-205ENST00000472224 RTEL1-TNFRSF6BF6WH68 1400 aa18.34■□□□□ 0.53
CLRN1-205ENST00000472224 TSPY4P0CV99 314 aa18.34■□□□□ 0.53
CLRN1-205ENST00000472224 TSPY10P0CW01 314 aa18.34■□□□□ 0.53
CLRN1-205ENST00000472224 RSPH4AQ5TD94 716 aa18.34■□□□□ 0.53
CLRN1-205ENST00000472224 RGS17Q9UGC6 210 aaPredicted RBP18.34■□□□□ 0.53
CLRN1-205ENST00000472224 MAST1Q9Y2H9 1570 aa18.34■□□□□ 0.53
CLRN1-205ENST00000472224 KCNA4P22459 653 aa18.33■□□□□ 0.52
CLRN1-205ENST00000472224 DEPDC5O75140 1603 aa18.33■□□□□ 0.52
CLRN1-205ENST00000472224 RNF17Q9BXT8 1623 aaKnown RBP18.33■□□□□ 0.52
CLRN1-205ENST00000472224 IQGAP1P46940 1657 aa18.31■□□□□ 0.52
CLRN1-205ENST00000472224 MED14O60244 1454 aa18.31■□□□□ 0.52
CLRN1-205ENST00000472224 TNRQ92752 1358 aa18.3■□□□□ 0.52
CLRN1-205ENST00000472224 FAM50AQ14320 339 aaKnown RBP18.3■□□□□ 0.52
CLRN1-205ENST00000472224 SYNMO15061 1565 aa18.3■□□□□ 0.52
CLRN1-205ENST00000472224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.3■□□□□ 0.52
CLRN1-205ENST00000472224 LRRC7Q96NW7 1537 aa18.29■□□□□ 0.52
CLRN1-205ENST00000472224 FBXO31Q5XUX0 539 aaPredicted RBP18.29■□□□□ 0.52
CLRN1-205ENST00000472224 DAPK1P53355 1430 aa18.29■□□□□ 0.52
CLRN1-205ENST00000472224 PZPP20742 1482 aa18.28■□□□□ 0.52
CLRN1-205ENST00000472224 ABCC5O15440 1437 aa18.28■□□□□ 0.52
CLRN1-205ENST00000472224 NPHP4O75161 1426 aaPredicted RBP18.28■□□□□ 0.52
CLRN1-205ENST00000472224 KDM5DQ9BY66 1539 aa18.26■□□□□ 0.51
CLRN1-205ENST00000472224 UGGT1Q9NYU2 1555 aa18.25■□□□□ 0.51
CLRN1-205ENST00000472224 ANKLE2Q86XL3 938 aa18.25■□□□□ 0.51
CLRN1-205ENST00000472224 DHX29Q7Z478 1369 aaKnown RBP18.25■□□□□ 0.51
CLRN1-205ENST00000472224 XIRP1Q702N8 1843 aaKnown RBP18.24■□□□□ 0.51
CLRN1-205ENST00000472224 ZC3H13Q5T200 1668 aaKnown RBP18.24■□□□□ 0.51
CLRN1-205ENST00000472224 NLRP1Q9C000 1473 aa18.22■□□□□ 0.51
CLRN1-205ENST00000472224 CHIC2Q9UKJ5 165 aa18.22■□□□□ 0.51
CLRN1-205ENST00000472224 SETD1AO15047 1707 aaKnown RBP18.22■□□□□ 0.51
CLRN1-205ENST00000472224 FAM135AQ9P2D6 1515 aa18.22■□□□□ 0.51
CLRN1-205ENST00000472224 KIF15Q9NS87 1388 aa18.21■□□□□ 0.51
CLRN1-205ENST00000472224 KIF3BO15066 747 aa18.21■□□□□ 0.51
CLRN1-205ENST00000472224 DUOX2Q9NRD8 1548 aa18.21■□□□□ 0.51
CLRN1-205ENST00000472224 EIF2AK4Q9P2K8 1649 aaKnown RBP18.2■□□□□ 0.5
CLRN1-205ENST00000472224 THEMISQ8N1K5 641 aaPredicted RBP18.19■□□□□ 0.5
CLRN1-205ENST00000472224 RRP7BPQ9NSQ0 103 aa18.19■□□□□ 0.5
CLRN1-205ENST00000472224 POTEAQ6S8J7 498 aa18.18■□□□□ 0.5
CLRN1-205ENST00000472224 ANKRD30AQ9BXX3 1397 aa18.17■□□□□ 0.5
CLRN1-205ENST00000472224 ITGAEP38570 1179 aa18.15■□□□□ 0.5
CLRN1-205ENST00000472224 ADGRL2O95490 1459 aa18.14■□□□□ 0.5
CLRN1-205ENST00000472224 CEP152O94986 1710 aa18.14■□□□□ 0.49
CLRN1-205ENST00000472224 ERBINQ96RT1 1412 aa18.14■□□□□ 0.49
CLRN1-205ENST00000472224 UBR1Q8IWV7 1749 aa18.13■□□□□ 0.49
CLRN1-205ENST00000472224 WASHC2CQ9Y4E1 1318 aa18.12■□□□□ 0.49
CLRN1-205ENST00000472224 MROH1Q8NDA8 1641 aa18.12■□□□□ 0.49
CLRN1-205ENST00000472224 RRBP1Q9P2E9 1410 aaKnown RBP18.1■□□□□ 0.49
CLRN1-205ENST00000472224 ABCC3O15438 1527 aa18.08■□□□□ 0.49
CLRN1-205ENST00000472224 CFAP65Q6ZU64 1925 aaKnown RBP18.08■□□□□ 0.49
CLRN1-205ENST00000472224 ROBO1Q9Y6N7 1651 aa18.08■□□□□ 0.48
CLRN1-205ENST00000472224 PRDM15P57071 1507 aaPredicted RBP18.08■□□□□ 0.48
CLRN1-205ENST00000472224 FAM135BQ49AJ0 1406 aa18.06■□□□□ 0.48
CLRN1-205ENST00000472224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.06■□□□□ 0.48
CLRN1-205ENST00000472224 ERVK-7P63135 1459 aa18.06■□□□□ 0.48
CLRN1-205ENST00000472224 SCAF11Q99590 1463 aaKnown RBP18.06■□□□□ 0.48
CLRN1-205ENST00000472224 ANKRD50Q9ULJ7 1429 aa18.05■□□□□ 0.48
CLRN1-205ENST00000472224 CNKSR2Q8WXI2 1034 aa18.04■□□□□ 0.48
CLRN1-205ENST00000472224 ROCK1Q13464 1354 aa18.04■□□□□ 0.48
CLRN1-205ENST00000472224 ARHGAP23Q9P227 1491 aa18.03■□□□□ 0.48
CLRN1-205ENST00000472224 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
CLRN1-205ENST00000472224 KANK1Q14678 1352 aa18.03■□□□□ 0.48
CLRN1-205ENST00000472224 SLIT1O75093 1534 aa18.03■□□□□ 0.48
CLRN1-205ENST00000472224 LTKP29376 864 aa18.01■□□□□ 0.47
CLRN1-205ENST00000472224 GCC2Q8IWJ2 1684 aa17.99■□□□□ 0.47
CLRN1-205ENST00000472224 UNC13BO14795 1591 aa17.98■□□□□ 0.47
CLRN1-205ENST00000472224 PHLPP1O60346 1717 aa17.97■□□□□ 0.47
CLRN1-205ENST00000472224 PIK3C2BO00750 1634 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms