RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 ABCA10Q8WWZ4 1543 aa15.7■□□□□ 0.1
IRF1-208ENST00000472045 DHX57Q6P158 1386 aaKnown RBP15.7■□□□□ 0.1
IRF1-208ENST00000472045 LMOD3Q0VAK6 560 aa15.7■□□□□ 0.1
IRF1-208ENST00000472045 PHLDB1Q86UU1 1377 aa15.7■□□□□ 0.1
IRF1-208ENST00000472045 CGNL1Q0VF96 1302 aa15.69■□□□□ 0.1
IRF1-208ENST00000472045 THEMISQ8N1K5 641 aaPredicted RBP15.69■□□□□ 0.1
IRF1-208ENST00000472045 TROQ12816 1431 aaPredicted RBP15.69■□□□□ 0.1
IRF1-208ENST00000472045 KCNJ4P48050 445 aa15.68■□□□□ 0.1
IRF1-208ENST00000472045 BECN1Q14457 450 aa15.68■□□□□ 0.1
IRF1-208ENST00000472045 STAC3Q96MF2 364 aa15.68■□□□□ 0.1
IRF1-208ENST00000472045 MAGI1Q96QZ7 1491 aaPredicted RBP15.67■□□□□ 0.1
IRF1-208ENST00000472045 C1orf141Q5JVX7 400 aa15.67■□□□□ 0.1
IRF1-208ENST00000472045 PANK3Q9H999 370 aa15.67■□□□□ 0.1
IRF1-208ENST00000472045 FGD1P98174 961 aa15.66■□□□□ 0.1
IRF1-208ENST00000472045 RGS3P49796 1198 aa15.66■□□□□ 0.1
IRF1-208ENST00000472045 PROSER2Q86WR7 435 aaPredicted RBP15.66■□□□□ 0.1
IRF1-208ENST00000472045 PRXQ9BXM0 1461 aa15.66■□□□□ 0.1
IRF1-208ENST00000472045 NLRP13Q86W25 1043 aa15.65■□□□□ 0.1
IRF1-208ENST00000472045 CENPJQ9HC77 1338 aaPredicted RBP15.65■□□□□ 0.1
IRF1-208ENST00000472045 ARAP1Q96P48 1450 aa15.64■□□□□ 0.1
IRF1-208ENST00000472045 HECW1Q76N89 1606 aa15.64■□□□□ 0.09
IRF1-208ENST00000472045 GTF2E1P29083 439 aaPredicted RBP15.64■□□□□ 0.09
IRF1-208ENST00000472045 NCLP19338 710 aaKnown RBP15.63■□□□□ 0.09
IRF1-208ENST00000472045 USP47Q96K76 1375 aa15.63■□□□□ 0.09
IRF1-208ENST00000472045 TAF7LQ5H9L4 462 aa15.62■□□□□ 0.09
IRF1-208ENST00000472045 CCDC146Q8IYE0 955 aa15.62■□□□□ 0.09
IRF1-208ENST00000472045 CHMP3Q9Y3E7 222 aa15.62■□□□□ 0.09
IRF1-208ENST00000472045 GRIN2AQ12879 1464 aa15.62■□□□□ 0.09
IRF1-208ENST00000472045 EHBP1L1Q8N3D4 1523 aa15.62■□□□□ 0.09
IRF1-208ENST00000472045 HDAC5Q9UQL6 1122 aa15.62■□□□□ 0.09
IRF1-208ENST00000472045 TAOK2Q9UL54 1235 aa15.61■□□□□ 0.09
IRF1-208ENST00000472045 IQGAP2Q13576 1575 aa15.61■□□□□ 0.09
IRF1-208ENST00000472045 C9orf84Q5VXU9 1444 aa15.61■□□□□ 0.09
IRF1-208ENST00000472045 MSH5O43196 834 aa15.61■□□□□ 0.09
IRF1-208ENST00000472045 CD109Q6YHK3 1445 aa15.61■□□□□ 0.09
IRF1-208ENST00000472045 CDK11BP21127 795 aaKnown RBP15.6■□□□□ 0.09
IRF1-208ENST00000472045 URB2Q14146 1524 aaKnown RBP15.6■□□□□ 0.09
IRF1-208ENST00000472045 DDRGK1Q96HY6 314 aa15.6■□□□□ 0.09
IRF1-208ENST00000472045 NAP1L2Q9ULW6 460 aaPredicted RBP15.6■□□□□ 0.09
IRF1-208ENST00000472045 APBB1O00213 710 aa15.6■□□□□ 0.09
IRF1-208ENST00000472045 TMEM132EQ6IEE7 984 aa15.6■□□□□ 0.09
IRF1-208ENST00000472045 ANKLE2Q86XL3 938 aa15.6■□□□□ 0.09
IRF1-208ENST00000472045 G3V3G9 751 aa15.59■□□□□ 0.09
IRF1-208ENST00000472045 TEFQ10587 303 aa15.59■□□□□ 0.09
IRF1-208ENST00000472045 DCAF8Q5TAQ9 597 aa15.59■□□□□ 0.09
IRF1-208ENST00000472045 ITPRIPQ8IWB1 547 aa15.59■□□□□ 0.09
IRF1-208ENST00000472045 ISY1Q9ULR0 285 aaKnown RBP15.59■□□□□ 0.09
IRF1-208ENST00000472045 RRBP1Q9P2E9 1410 aaKnown RBP15.58■□□□□ 0.08
IRF1-208ENST00000472045 SMC4Q9NTJ3 1288 aa15.58■□□□□ 0.08
IRF1-208ENST00000472045 PPP4R2Q9NY27 417 aa15.58■□□□□ 0.08
IRF1-208ENST00000472045 GORABQ5T7V8 394 aa15.57■□□□□ 0.08
IRF1-208ENST00000472045 SYTL4Q96C24 671 aaPredicted RBP15.57■□□□□ 0.08
IRF1-208ENST00000472045 SLC52A1Q9NWF4 448 aa15.57■□□□□ 0.08
IRF1-208ENST00000472045 TTC5Q8N0Z6 440 aa15.57■□□□□ 0.08
IRF1-208ENST00000472045 PHF23Q9BUL5 403 aaPredicted RBP15.57■□□□□ 0.08
IRF1-208ENST00000472045 GPRASP1Q5JY77 1395 aa15.56■□□□□ 0.08
IRF1-208ENST00000472045 ESCO1Q5FWF5 840 aa15.56■□□□□ 0.08
IRF1-208ENST00000472045 ZNF608Q9ULD9 1512 aaPredicted RBP15.56■□□□□ 0.08
IRF1-208ENST00000472045 MIA2Q96PC5 1412 aa15.56■□□□□ 0.08
IRF1-208ENST00000472045 SLC4A10Q6U841 1118 aa15.56■□□□□ 0.08
IRF1-208ENST00000472045 GOLGA6L22H0YM25 854 aa15.56■□□□□ 0.08
IRF1-208ENST00000472045 ZRSR1Q15695 479 aaKnown RBP15.54■□□□□ 0.08
IRF1-208ENST00000472045 MYBBP1AQ9BQG0 1328 aaKnown RBP15.54■□□□□ 0.08
IRF1-208ENST00000472045 NUTM2GQ5VZR2 741 aa15.54■□□□□ 0.08
IRF1-208ENST00000472045 CUL7Q14999 1698 aa15.54■□□□□ 0.08
IRF1-208ENST00000472045 RAPGEF4Q8WZA2 1011 aa15.53■□□□□ 0.08
IRF1-208ENST00000472045 CABP2Q9NPB3 220 aa15.53■□□□□ 0.08
IRF1-208ENST00000472045 RRP7AQ9Y3A4 280 aaKnown RBP15.53■□□□□ 0.08
IRF1-208ENST00000472045 DIAPH1O60610 1272 aaKnown RBP15.53■□□□□ 0.08
IRF1-208ENST00000472045 NLRP6P59044 892 aa15.53■□□□□ 0.08
IRF1-208ENST00000472045 RCAN3Q9UKA8 241 aa15.52■□□□□ 0.08
IRF1-208ENST00000472045 TULP1O00294 542 aaPredicted RBP15.52■□□□□ 0.08
IRF1-208ENST00000472045 CFAP70Q5T0N1 1121 aa15.52■□□□□ 0.08
IRF1-208ENST00000472045 NLRP2Q9NX02 1062 aa15.52■□□□□ 0.08
IRF1-208ENST00000472045 PEG3Q9GZU2 1588 aa15.52■□□□□ 0.07
IRF1-208ENST00000472045 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.07
IRF1-208ENST00000472045 MCCP23508 829 aa15.51■□□□□ 0.07
IRF1-208ENST00000472045 EPRSP07814 1512 aaKnown RBP15.51■□□□□ 0.07
IRF1-208ENST00000472045 PLB1Q6P1J6 1458 aa15.5■□□□□ 0.07
IRF1-208ENST00000472045 HMMRO75330 724 aa15.5■□□□□ 0.07
IRF1-208ENST00000472045 UNC13AQ9UPW8 1703 aa15.5■□□□□ 0.07
IRF1-208ENST00000472045 HFM1A2PYH4 1435 aa15.49■□□□□ 0.07
IRF1-208ENST00000472045 CFAP44Q96MT7 982 aa15.49■□□□□ 0.07
IRF1-208ENST00000472045 SLC26A8Q96RN1 970 aa15.49■□□□□ 0.07
IRF1-208ENST00000472045 PRAM1Q96QH2 718 aa15.48■□□□□ 0.07
IRF1-208ENST00000472045 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
IRF1-208ENST00000472045 ABTB2Q8N961 1025 aa15.48■□□□□ 0.07
IRF1-208ENST00000472045 KIAA1211Q6ZU35 1233 aa15.48■□□□□ 0.07
IRF1-208ENST00000472045 RWDD1Q9H446 243 aaPredicted RBP15.48■□□□□ 0.07
IRF1-208ENST00000472045 FRAT2O75474 233 aaPredicted RBP15.48■□□□□ 0.07
IRF1-208ENST00000472045 TPRNQ4KMQ1 711 aa15.48■□□□□ 0.07
IRF1-208ENST00000472045 GPATCH3Q96I76 525 aa15.47■□□□□ 0.07
IRF1-208ENST00000472045 ADGRL1O94910 1474 aa15.47■□□□□ 0.07
IRF1-208ENST00000472045 B4GALNT3Q6L9W6 998 aa15.47■□□□□ 0.07
IRF1-208ENST00000472045 ELL2O00472 640 aaPredicted RBP15.46■□□□□ 0.07
IRF1-208ENST00000472045 GGNBP2Q9H3C7 697 aa15.46■□□□□ 0.07
IRF1-208ENST00000472045 PIP4K2BP78356 416 aa15.46■□□□□ 0.07
IRF1-208ENST00000472045 PMFBP1Q8TBY8 1022 aa15.46■□□□□ 0.07
IRF1-208ENST00000472045 NBR1Q14596 966 aa15.45■□□□□ 0.06
IRF1-208ENST00000472045 NGEFQ8N5V2 710 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms