RNA–Protein interactions for RNA: ENST00000472040.1

GREB1-209, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 5

Gene GREB1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-209ENST00000472040 DEPDC5O75140 1603 aa21.74■■□□□ 1.07
GREB1-209ENST00000472040 RNF17Q9BXT8 1623 aaKnown RBP21.73■■□□□ 1.07
GREB1-209ENST00000472040 KDM5DQ9BY66 1539 aa21.73■■□□□ 1.07
GREB1-209ENST00000472040 FAM135AQ9P2D6 1515 aa21.72■■□□□ 1.07
GREB1-209ENST00000472040 KANK1Q14678 1352 aa21.71■■□□□ 1.07
GREB1-209ENST00000472040 TRIM52Q96A61 297 aa21.7■■□□□ 1.06
GREB1-209ENST00000472040 NUP155O75694 1391 aa21.7■■□□□ 1.06
GREB1-209ENST00000472040 PRDM15P57071 1507 aaPredicted RBP21.7■■□□□ 1.06
GREB1-209ENST00000472040 VWDEQ8N2E2 1590 aa21.68■■□□□ 1.06
GREB1-209ENST00000472040 MROH1Q8NDA8 1641 aa21.66■■□□□ 1.06
GREB1-209ENST00000472040 GGT6Q6P531 493 aa21.66■■□□□ 1.06
GREB1-209ENST00000472040 IQGAP3Q86VI3 1631 aa21.66■■□□□ 1.06
GREB1-209ENST00000472040 LMTK2Q8IWU2 1503 aa21.65■■□□□ 1.06
GREB1-209ENST00000472040 MPHOSPH9Q99550 1183 aa21.65■■□□□ 1.06
GREB1-209ENST00000472040 ARID4BQ4LE39 1312 aaPredicted RBP21.64■■□□□ 1.05
GREB1-209ENST00000472040 SIGLEC1Q9BZZ2 1709 aa21.63■■□□□ 1.05
GREB1-209ENST00000472040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.63■■□□□ 1.054e-8■□□□□ 8.6
GREB1-209ENST00000472040 SLC4A1APQ9BWU0 796 aaKnown RBP21.62■■□□□ 1.05
GREB1-209ENST00000472040 PZPP20742 1482 aa21.62■■□□□ 1.05
GREB1-209ENST00000472040 WASHC2CQ9Y4E1 1318 aa21.61■■□□□ 1.05
GREB1-209ENST00000472040 ZC3H13Q5T200 1668 aaKnown RBP21.61■■□□□ 1.05
GREB1-209ENST00000472040 DHX57Q6P158 1386 aaKnown RBP21.61■■□□□ 1.05
GREB1-209ENST00000472040 CLSPNQ9HAW4 1339 aa21.59■■□□□ 1.05
GREB1-209ENST00000472040 CNTLNQ9NXG0 1405 aa21.59■■□□□ 1.05
GREB1-209ENST00000472040 ARHGAP31Q2M1Z3 1444 aa21.57■■□□□ 1.04
GREB1-209ENST00000472040 ABCC3O15438 1527 aa21.57■■□□□ 1.04
GREB1-209ENST00000472040 TET3O43151 1660 aa21.56■■□□□ 1.04
GREB1-209ENST00000472040 ESF1Q9H501 851 aaKnown RBP21.55■■□□□ 1.04
GREB1-209ENST00000472040 RPRD2Q5VT52 1461 aaKnown RBP21.55■■□□□ 1.04
GREB1-209ENST00000472040 PKD2Q13563 968 aa21.54■■□□□ 1.04
GREB1-209ENST00000472040 MLECQ14165 292 aa21.53■■□□□ 1.04
GREB1-209ENST00000472040 EFCAB6Q5THR3 1501 aa21.51■■□□□ 1.03
GREB1-209ENST00000472040 CEP152O94986 1710 aa21.49■■□□□ 1.03
GREB1-209ENST00000472040 CCER1Q8TC90 406 aaPredicted RBP21.49■■□□□ 1.03
GREB1-209ENST00000472040 MROH2AA6NES4 1674 aa21.49■■□□□ 1.03
GREB1-209ENST00000472040 ADAMTSL3P82987 1691 aa21.49■■□□□ 1.03
GREB1-209ENST00000472040 CAMSAP1Q5T5Y3 1602 aa21.48■■□□□ 1.03
GREB1-209ENST00000472040 ZMYM3Q14202 1370 aa21.48■■□□□ 1.03
GREB1-209ENST00000472040 ANKRD30BQ9BXX2 1392 aa21.47■■□□□ 1.03
GREB1-209ENST00000472040 PTPRTO14522 1441 aa21.46■■□□□ 1.03
GREB1-209ENST00000472040 NPATQ14207 1427 aa21.46■■□□□ 1.03
GREB1-209ENST00000472040 E9PCH4 1651 aa21.46■■□□□ 1.03
GREB1-209ENST00000472040 CLTCQ00610 1675 aaKnown RBP21.46■■□□□ 1.03
GREB1-209ENST00000472040 FER1L4A9Z1Z3 1794 aa21.43■■□□□ 1.02
GREB1-209ENST00000472040 NOS1P29475 1434 aa21.42■■□□□ 1.02
GREB1-209ENST00000472040 FOXD1Q16676 465 aa21.39■■□□□ 1.01
GREB1-209ENST00000472040 MADDQ8WXG6 1647 aa21.39■■□□□ 1.01
GREB1-209ENST00000472040 PLA2R1Q13018 1463 aa21.39■■□□□ 1.01
GREB1-209ENST00000472040 SLC52A1Q9NWF4 448 aa21.38■■□□□ 1.01
GREB1-209ENST00000472040 TRPM2O94759 1503 aa21.38■■□□□ 1.01
GREB1-209ENST00000472040 SPATA31D1Q6ZQQ2 1576 aa21.37■■□□□ 1.01
GREB1-209ENST00000472040 SPHKAPQ2M3C7 1700 aa21.37■■□□□ 1.01
GREB1-209ENST00000472040 TIMELESSQ9UNS1 1208 aa21.36■■□□□ 1.01
GREB1-209ENST00000472040 ERVK-7P63135 1459 aa21.36■■□□□ 1.01
GREB1-209ENST00000472040 PREX1Q8TCU6 1659 aa21.34■■□□□ 1.01
GREB1-209ENST00000472040 CCDC144AA2RUR9 1427 aa21.34■■□□□ 1.01
GREB1-209ENST00000472040 C3P01024 1663 aa21.33■■□□□ 1
GREB1-209ENST00000472040 RIMS1Q86UR5 1692 aaKnown RBP21.32■■□□□ 1
GREB1-209ENST00000472040 FBXO31Q5XUX0 539 aaPredicted RBP21.32■■□□□ 1
GREB1-209ENST00000472040 NEURL4Q96JN8 1562 aa21.31■■□□□ 1
GREB1-209ENST00000472040 PTPRMP28827 1452 aa21.3■■□□□ 1
GREB1-209ENST00000472040 PIK3C2BO00750 1634 aa21.29■■□□□ 1
GREB1-209ENST00000472040 SYNMO15061 1565 aa21.28■■□□□ 1
GREB1-209ENST00000472040 TNRQ92752 1358 aa21.28■■□□□ 1
GREB1-209ENST00000472040 KDM4FA0A1W2PPD8 638 aa21.28■■□□□ 1
GREB1-209ENST00000472040 CFAP65Q6ZU64 1925 aaKnown RBP21.27■■□□□ 1
GREB1-209ENST00000472040 CEBPAP49715 358 aaPredicted RBP21.27■■□□□ 1
GREB1-209ENST00000472040 SIN3AQ96ST3 1273 aa21.27■■□□□ 1
GREB1-209ENST00000472040 SETD1BQ9UPS6 1966 aaKnown RBP21.27■□□□□ 0.99
GREB1-209ENST00000472040 ZEB1P37275 1124 aaPredicted RBP21.26■□□□□ 0.99
GREB1-209ENST00000472040 IDI1Q13907 227 aa21.26■□□□□ 0.99
GREB1-209ENST00000472040 NLRP1Q9C000 1473 aa21.26■□□□□ 0.99
GREB1-209ENST00000472040 STAC3Q96MF2 364 aa21.25■□□□□ 0.99
GREB1-209ENST00000472040 CLTCL1P53675 1640 aa21.24■□□□□ 0.99
GREB1-209ENST00000472040 NEUROD1Q13562 356 aa21.22■□□□□ 0.99
GREB1-209ENST00000472040 KDM5AP29375 1690 aaKnown RBP21.21■□□□□ 0.99
GREB1-209ENST00000472040 SPATA31E1Q6ZUB1 1445 aa21.21■□□□□ 0.99
GREB1-209ENST00000472040 KIF1BO60333 1816 aa21.2■□□□□ 0.98
GREB1-209ENST00000472040 RPGRIP1LQ68CZ1 1315 aa21.2■□□□□ 0.98
GREB1-209ENST00000472040 TONSLQ96HA7 1378 aa21.19■□□□□ 0.98
GREB1-209ENST00000472040 UGGT1Q9NYU2 1555 aa21.18■□□□□ 0.98
GREB1-209ENST00000472040 ADGRB3O60242 1522 aa21.17■□□□□ 0.98
GREB1-209ENST00000472040 TMEM131LA2VDJ0 1609 aa21.15■□□□□ 0.98
GREB1-209ENST00000472040 A2ML1A8K2U0 1454 aa21.15■□□□□ 0.98
GREB1-209ENST00000472040 STAG3Q9UJ98 1225 aa21.14■□□□□ 0.97
GREB1-209ENST00000472040 HDGFP51858 240 aaKnown RBP21.13■□□□□ 0.97
GREB1-209ENST00000472040 THEMISQ8N1K5 641 aaPredicted RBP21.13■□□□□ 0.97
GREB1-209ENST00000472040 L3MBTL2Q969R5 705 aa21.13■□□□□ 0.97
GREB1-209ENST00000472040 MYO3AQ8NEV4 1616 aa21.12■□□□□ 0.97
GREB1-209ENST00000472040 UHRF1BP1Q6BDS2 1440 aa21.12■□□□□ 0.97
GREB1-209ENST00000472040 CHGAP10645 457 aaKnown RBP21.11■□□□□ 0.97
GREB1-209ENST00000472040 PLPPR3Q6T4P5 718 aa21.11■□□□□ 0.97
GREB1-209ENST00000472040 ZNF142P52746 1687 aaPredicted RBP21.1■□□□□ 0.97
GREB1-209ENST00000472040 RGL3Q3MIN7 710 aa21.1■□□□□ 0.97
GREB1-209ENST00000472040 CEP170BQ9Y4F5 1589 aaPredicted RBP21.1■□□□□ 0.97
GREB1-209ENST00000472040 PPP1R15AO75807 674 aaPredicted RBP21.09■□□□□ 0.97
GREB1-209ENST00000472040 ZFYVE9O95405 1425 aa21.09■□□□□ 0.97
GREB1-209ENST00000472040 UBR1Q8IWV7 1749 aa21.09■□□□□ 0.97
GREB1-209ENST00000472040 ZNF326Q5BKZ1 582 aaKnown RBP21.08■□□□□ 0.97
GREB1-209ENST00000472040 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms