RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 PTPRKQ15262 1439 aa22.87■■□□□ 1.25
SSR4-208ENST00000471880 NPATQ14207 1427 aa22.86■■□□□ 1.25
SSR4-208ENST00000471880 EIF2AK4Q9P2K8 1649 aaKnown RBP22.86■■□□□ 1.25
SSR4-208ENST00000471880 SHANK2Q9UPX8 1470 aa22.85■■□□□ 1.25
SSR4-208ENST00000471880 ZNF142P52746 1687 aaPredicted RBP22.84■■□□□ 1.25
SSR4-208ENST00000471880 DAPK1P53355 1430 aa22.84■■□□□ 1.25
SSR4-208ENST00000471880 KDM5DQ9BY66 1539 aa22.83■■□□□ 1.25
SSR4-208ENST00000471880 CEP152O94986 1710 aa22.83■■□□□ 1.25
SSR4-208ENST00000471880 CHIC2Q9UKJ5 165 aa22.83■■□□□ 1.25
SSR4-208ENST00000471880 RRP7BPQ9NSQ0 103 aa22.81■■□□□ 1.24
SSR4-208ENST00000471880 CFAP65Q6ZU64 1925 aaKnown RBP22.8■■□□□ 1.24
SSR4-208ENST00000471880 DUOX2Q9NRD8 1548 aa22.8■■□□□ 1.24
SSR4-208ENST00000471880 FAM135AQ9P2D6 1515 aa22.79■■□□□ 1.24
SSR4-208ENST00000471880 PPP6R1Q9UPN7 881 aa22.79■■□□□ 1.24
SSR4-208ENST00000471880 ILDR1Q86SU0 546 aaPredicted RBP22.78■■□□□ 1.24
SSR4-208ENST00000471880 CEP170BQ9Y4F5 1589 aaPredicted RBP22.78■■□□□ 1.24
SSR4-208ENST00000471880 WASHC2CQ9Y4E1 1318 aa22.78■■□□□ 1.24
SSR4-208ENST00000471880 ABCC3O15438 1527 aa22.77■■□□□ 1.24
SSR4-208ENST00000471880 KIF15Q9NS87 1388 aa22.77■■□□□ 1.24
SSR4-208ENST00000471880 ZC3H13Q5T200 1668 aaKnown RBP22.77■■□□□ 1.24
SSR4-208ENST00000471880 CAMSAP1Q5T5Y3 1602 aa22.76■■□□□ 1.23
SSR4-208ENST00000471880 PZPP20742 1482 aa22.76■■□□□ 1.23
SSR4-208ENST00000471880 FBXO31Q5XUX0 539 aaPredicted RBP22.75■■□□□ 1.23
SSR4-208ENST00000471880 DEPDC5O75140 1603 aa22.74■■□□□ 1.23
SSR4-208ENST00000471880 NCOA1Q15788 1441 aa22.74■■□□□ 1.23
SSR4-208ENST00000471880 ANKRD30AQ9BXX3 1397 aa22.73■■□□□ 1.23
SSR4-208ENST00000471880 ITGAEP38570 1179 aa22.72■■□□□ 1.23
SSR4-208ENST00000471880 PRDM15P57071 1507 aaPredicted RBP22.72■■□□□ 1.23
SSR4-208ENST00000471880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.71■■□□□ 1.23
SSR4-208ENST00000471880 ERBINQ96RT1 1412 aa22.7■■□□□ 1.22
SSR4-208ENST00000471880 ADGRL2O95490 1459 aa22.69■■□□□ 1.22
SSR4-208ENST00000471880 TNRQ92752 1358 aa22.67■■□□□ 1.22
SSR4-208ENST00000471880 A2ML1A8K2U0 1454 aa22.66■■□□□ 1.22
SSR4-208ENST00000471880 SPATA31D1Q6ZQQ2 1576 aa22.66■■□□□ 1.22
SSR4-208ENST00000471880 PTPRTO14522 1441 aa22.64■■□□□ 1.21
SSR4-208ENST00000471880 POLR1AO95602 1720 aaPredicted RBP22.63■■□□□ 1.21
SSR4-208ENST00000471880 ERVK-7P63135 1459 aa22.63■■□□□ 1.21
SSR4-208ENST00000471880 VWDEQ8N2E2 1590 aa22.63■■□□□ 1.21
SSR4-208ENST00000471880 NCKAP5LQ9HCH0 1330 aa22.62■■□□□ 1.21
SSR4-208ENST00000471880 PLA2R1Q13018 1463 aa22.62■■□□□ 1.21
SSR4-208ENST00000471880 KANK1Q14678 1352 aa22.62■■□□□ 1.21
SSR4-208ENST00000471880 NEURL4Q96JN8 1562 aa22.59■■□□□ 1.21
SSR4-208ENST00000471880 LTBP4Q8N2S1 1624 aa22.58■■□□□ 1.21
SSR4-208ENST00000471880 NLRP1Q9C000 1473 aa22.56■■□□□ 1.2
SSR4-208ENST00000471880 DMRT2Q9Y5R5 561 aa22.56■■□□□ 1.2
SSR4-208ENST00000471880 UBR1Q8IWV7 1749 aa22.56■■□□□ 1.2
SSR4-208ENST00000471880 UGGT1Q9NYU2 1555 aa22.55■■□□□ 1.2
SSR4-208ENST00000471880 LMTK2Q8IWU2 1503 aa22.54■■□□□ 1.2
SSR4-208ENST00000471880 CERKQ8TCT0 537 aa22.54■■□□□ 1.2
SSR4-208ENST00000471880 FBXO41Q8TF61 875 aa22.54■■□□□ 1.2
SSR4-208ENST00000471880 ARHGAP31Q2M1Z3 1444 aa22.54■■□□□ 1.2
SSR4-208ENST00000471880 ANKRD50Q9ULJ7 1429 aa22.54■■□□□ 1.2
SSR4-208ENST00000471880 UNC13BO14795 1591 aa22.52■■□□□ 1.2
SSR4-208ENST00000471880 EFCAB6Q5THR3 1501 aa22.52■■□□□ 1.19
SSR4-208ENST00000471880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.51■■□□□ 1.196e-8■■□□□ 11.8
SSR4-208ENST00000471880 SYNMO15061 1565 aa22.5■■□□□ 1.19
SSR4-208ENST00000471880 PIK3C2BO00750 1634 aa22.5■■□□□ 1.19
SSR4-208ENST00000471880 PKD2Q13563 968 aa22.48■■□□□ 1.19
SSR4-208ENST00000471880 TET3O43151 1660 aa22.47■■□□□ 1.19
SSR4-208ENST00000471880 ZNF335Q9H4Z2 1342 aaPredicted RBP22.47■■□□□ 1.19
SSR4-208ENST00000471880 ROCK1Q13464 1354 aa22.47■■□□□ 1.19
SSR4-208ENST00000471880 RRBP1Q9P2E9 1410 aaKnown RBP22.47■■□□□ 1.19
SSR4-208ENST00000471880 GCC2Q8IWJ2 1684 aa22.46■■□□□ 1.19
SSR4-208ENST00000471880 THEMISQ8N1K5 641 aaPredicted RBP22.44■■□□□ 1.18
SSR4-208ENST00000471880 MYO5BQ9ULV0 1848 aa22.44■■□□□ 1.18
SSR4-208ENST00000471880 E9PCH4 1651 aa22.43■■□□□ 1.18
SSR4-208ENST00000471880 IQGAP1P46940 1657 aa22.42■■□□□ 1.18
SSR4-208ENST00000471880 NOS1P29475 1434 aa22.42■■□□□ 1.18
SSR4-208ENST00000471880 STAG3Q9UJ98 1225 aa22.42■■□□□ 1.18
SSR4-208ENST00000471880 IQGAP3Q86VI3 1631 aa22.42■■□□□ 1.18
SSR4-208ENST00000471880 STRCP1A6NGW2 1772 aa22.41■■□□□ 1.18
SSR4-208ENST00000471880 MED14O60244 1454 aa22.41■■□□□ 1.18
SSR4-208ENST00000471880 ARHGAP23Q9P227 1491 aa22.39■■□□□ 1.17
SSR4-208ENST00000471880 KDM5AP29375 1690 aaKnown RBP22.39■■□□□ 1.17
SSR4-208ENST00000471880 ANKLE2Q86XL3 938 aa22.38■■□□□ 1.17
SSR4-208ENST00000471880 NPHP4O75161 1426 aaPredicted RBP22.38■■□□□ 1.17
SSR4-208ENST00000471880 SLIT1O75093 1534 aa22.37■■□□□ 1.17
SSR4-208ENST00000471880 NUP155O75694 1391 aa22.36■■□□□ 1.17
SSR4-208ENST00000471880 IDI1Q13907 227 aa22.35■■□□□ 1.17
SSR4-208ENST00000471880 RPRD2Q5VT52 1461 aaKnown RBP22.34■■□□□ 1.17
SSR4-208ENST00000471880 ADGRB3O60242 1522 aa22.33■■□□□ 1.17
SSR4-208ENST00000471880 LTKP29376 864 aa22.33■■□□□ 1.17
SSR4-208ENST00000471880 SCAF11Q99590 1463 aaKnown RBP22.33■■□□□ 1.16
SSR4-208ENST00000471880 IQSEC2Q5JU85 1478 aa22.32■■□□□ 1.16
SSR4-208ENST00000471880 NAIPQ13075 1403 aa22.3■■□□□ 1.16
SSR4-208ENST00000471880 TMEM131LA2VDJ0 1609 aa22.29■■□□□ 1.16
SSR4-208ENST00000471880 TMEM2Q9UHN6 1383 aa22.28■■□□□ 1.16
SSR4-208ENST00000471880 CHGAP10645 457 aaKnown RBP22.28■■□□□ 1.16
SSR4-208ENST00000471880 TRIM52Q96A61 297 aa22.28■■□□□ 1.16
SSR4-208ENST00000471880 TXNDC2Q86VQ3 553 aa22.27■■□□□ 1.16
SSR4-208ENST00000471880 EID1Q9Y6B2 187 aa22.27■■□□□ 1.16
SSR4-208ENST00000471880 SPHKAPQ2M3C7 1700 aa22.26■■□□□ 1.15
SSR4-208ENST00000471880 CPS1P31327 1500 aa22.25■■□□□ 1.15
SSR4-208ENST00000471880 XIRP1Q702N8 1843 aaKnown RBP22.24■■□□□ 1.15
SSR4-208ENST00000471880 SLC52A1Q9NWF4 448 aa22.24■■□□□ 1.15
SSR4-208ENST00000471880 BCANQ96GW7 911 aa22.22■■□□□ 1.15
SSR4-208ENST00000471880 SENP3Q9H4L4 574 aaPredicted RBP22.22■■□□□ 1.15
SSR4-208ENST00000471880 ALKQ9UM73 1620 aa22.21■■□□□ 1.15
SSR4-208ENST00000471880 HFM1A2PYH4 1435 aa22.21■■□□□ 1.15
SSR4-208ENST00000471880 ZFYVE9O95405 1425 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms